RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 SRPRBQ9Y5M8 271 aaKnown RBP6.3□□□□□ -1.4
COPS3-208ENST00000486032 A0A1B0GVL5 298 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 TMEM150BA6NC51 233 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 A6NJR5 290 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 H3BRB1 525 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 ZBTB39O15060 712 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 CTAGE5O15320 804 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 PPP6R2O75170 966 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 GADD45BO75293 160 aaPredicted RBP6.29□□□□□ -1.4
COPS3-208ENST00000486032 PPFIA4O75335 1185 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 P4HBP07237 508 aaKnown RBP6.29□□□□□ -1.4
COPS3-208ENST00000486032 LONP1P36776 959 aaKnown RBP6.29□□□□□ -1.4
COPS3-208ENST00000486032 TXLNAP40222 546 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 QARSP47897 775 aaKnown RBP6.29□□□□□ -1.4
COPS3-208ENST00000486032 PSMC5P62195 406 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 PURAQ00577 322 aaKnown RBP6.29□□□□□ -1.4
COPS3-208ENST00000486032 PRKCEQ02156 737 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 SPIRE1Q08AE8 756 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 PDIA5Q14554 519 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 KARSQ15046 597 aaKnown RBP6.29□□□□□ -1.4
COPS3-208ENST00000486032 DBN1Q16643 649 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 CSPP1Q1MSJ5 1256 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 KIAA0753Q2KHM9 967 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 MTERF2Q49AM1 385 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 HAUS3Q68CZ6 603 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 PLA2G4FQ68DD2 849 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 MAEAQ7L5Y9 396 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 LYSMD3Q7Z3D4 306 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 FSIP1Q8NA03 581 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 KLHDC9Q8NEP7 349 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 PIGOQ8TEQ8 1089 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 ATP6V0A1Q93050 837 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 DHX58Q96C10 678 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 ZBTB10Q96DT7 871 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 CALML4Q96GE6 196 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 GLT1D1Q96MS3 346 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 PCYT2Q99447 389 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 LXNQ9BS40 222 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 MTG1Q9BT17 334 aaPredicted RBP6.29□□□□□ -1.4
COPS3-208ENST00000486032 SMARCAD1Q9H4L7 1026 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 TUT1Q9H6E5 874 aaKnown RBP6.29□□□□□ -1.4
COPS3-208ENST00000486032 ZNF395Q9H8N7 513 aaPredicted RBP6.29□□□□□ -1.4
COPS3-208ENST00000486032 DDX19AQ9NUU7 478 aaKnown RBP6.29□□□□□ -1.4
COPS3-208ENST00000486032 FAM13BQ9NYF5 915 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 ERAP1Q9NZ08 941 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 OGDHLQ9ULD0 1010 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 KIAA1024Q9UPX6 916 aa6.29□□□□□ -1.4
COPS3-208ENST00000486032 A0A1W2PQ45 241 aaPredicted RBP6.28□□□□□ -1.4
COPS3-208ENST00000486032 A0A1W2PQY0 241 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 MOXD2PA6NHM9 499 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 E9PMD0 336 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 GOLGA6L22H0YM25 854 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 DNM1LO00429 736 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 ZNF862O60290 1169 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 KPNA6O60684 536 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 DKC1O60832 514 aaKnown RBP eCLIP6.28□□□□□ -1.4
COPS3-208ENST00000486032 LGR5O75473 907 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 SLITRK3O94933 977 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 ATG7O95352 703 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 F12P00748 615 aaPredicted RBP6.28□□□□□ -1.4
COPS3-208ENST00000486032 COL6A1P12109 1028 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 ATP4AP20648 1035 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 CST5P28325 142 aaPredicted RBP6.28□□□□□ -1.4
COPS3-208ENST00000486032 STAT6P42226 847 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 MAP2K3P46734 347 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 NPEPPSP55786 919 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 ZNF200P98182 395 aaPredicted RBP6.28□□□□□ -1.4
COPS3-208ENST00000486032 MLLT1Q03111 559 aaPredicted RBP6.28□□□□□ -1.4
COPS3-208ENST00000486032 ITGA7Q13683 1181 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 PLCB4Q15147 1175 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 ECM1Q16610 540 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 LRRC26Q2I0M4 334 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 NBPF20Q3BBV1 942 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 XKR9Q5GH70 373 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 AXDND1Q5T1B0 1012 aaPredicted RBP6.28□□□□□ -1.4
COPS3-208ENST00000486032 RRAGBQ5VZM2 374 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 SHC4Q6S5L8 630 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 B3GNT9Q6UX72 402 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 LINC00114Q6XXX2 140 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 CATSPER3Q86XQ3 398 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 C7orf31Q8N865 590 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 IGSF22Q8N9C0 903 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 RDM1Q8NG50 284 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 NEK9Q8TD19 979 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 TRAPPC12Q8WVT3 735 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 STAMQ92783 540 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 KAT2BQ92831 832 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 CEP170P1Q96L14 293 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 PNMA5Q96PV4 448 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 C16orf70Q9BSU1 422 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 MMTAG2Q9BU76 263 aaKnown RBP6.28□□□□□ -1.4
COPS3-208ENST00000486032 KATNAL1Q9BW62 490 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 KRTAP4-9Q9BYQ8 210 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 RNPEPQ9H4A4 650 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 C11orf49Q9H6J7 331 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 ZSWIM4Q9H7M6 989 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 TUFT1Q9NNX1 390 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 NRBP2Q9NSY0 501 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 SETD4Q9NVD3 440 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 WRAP73Q9P2S5 460 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms