RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 CTNNB1P35222 781 aa13.91□□□□□ -0.18
PTCD1-205ENST00000485746 GRB10Q13322 594 aa13.91□□□□□ -0.18
PTCD1-205ENST00000485746 DSC3Q14574 896 aa13.91□□□□□ -0.18
PTCD1-205ENST00000485746 EPC2Q52LR7 807 aa13.91□□□□□ -0.18
PTCD1-205ENST00000485746 TWF2Q6IBS0 349 aaKnown RBP13.91□□□□□ -0.18
PTCD1-205ENST00000485746 SRGAP1Q7Z6B7 1085 aa13.91□□□□□ -0.18
PTCD1-205ENST00000485746 ABI1Q8IZP0 508 aa13.91□□□□□ -0.18
PTCD1-205ENST00000485746 GDPD5Q8WTR4 605 aa13.91□□□□□ -0.18
PTCD1-205ENST00000485746 POLR3FQ9H1D9 316 aaPredicted RBP13.91□□□□□ -0.18
PTCD1-205ENST00000485746 CHST12Q9NRB3 414 aa13.91□□□□□ -0.18
PTCD1-205ENST00000485746 DDX19AQ9NUU7 478 aaKnown RBP13.91□□□□□ -0.18
PTCD1-205ENST00000485746 KIAA1024Q9UPX6 916 aa13.91□□□□□ -0.18
PTCD1-205ENST00000485746 DNM3Q9UQ16 869 aa13.91□□□□□ -0.18
PTCD1-205ENST00000485746 HOXA2O43364 376 aa13.9□□□□□ -0.18
PTCD1-205ENST00000485746 ERLIN2O94905 339 aa13.9□□□□□ -0.18
PTCD1-205ENST00000485746 SKIP12755 728 aa13.9□□□□□ -0.18
PTCD1-205ENST00000485746 GATMP50440 423 aa13.9□□□□□ -0.18
PTCD1-205ENST00000485746 ATP2C1P98194 919 aaPredicted RBP13.9□□□□□ -0.18
PTCD1-205ENST00000485746 GPM6BQ13491 265 aa13.9□□□□□ -0.18
PTCD1-205ENST00000485746 PTPROQ16827 1216 aa13.9□□□□□ -0.18
PTCD1-205ENST00000485746 PADI6Q6TGC4 694 aa13.9□□□□□ -0.18
PTCD1-205ENST00000485746 ECHDC2Q86YB7 292 aa13.9□□□□□ -0.18
PTCD1-205ENST00000485746 CMTR2Q8IYT2 770 aaKnown RBP13.9□□□□□ -0.18
PTCD1-205ENST00000485746 IGSF22Q8N9C0 903 aa13.9□□□□□ -0.18
PTCD1-205ENST00000485746 MCPH1Q8NEM0 835 aa13.9□□□□□ -0.18
PTCD1-205ENST00000485746 ZNF689Q96CS4 500 aaPredicted RBP13.9□□□□□ -0.18
PTCD1-205ENST00000485746 ELAC1Q9H777 363 aaKnown RBP13.9□□□□□ -0.18
PTCD1-205ENST00000485746 XPNPEP1Q9NQW7 623 aa13.9□□□□□ -0.18
PTCD1-205ENST00000485746 TMEM161AQ9NX61 479 aa13.9□□□□□ -0.18
PTCD1-205ENST00000485746 LRRIQ4A6NIV6 560 aa13.89□□□□□ -0.19
PTCD1-205ENST00000485746 PP2D1A8MPX8 630 aa13.89□□□□□ -0.19
PTCD1-205ENST00000485746 INO80B-WBP1J3KQ70 363 aa13.89□□□□□ -0.19
PTCD1-205ENST00000485746 CDC25AP30304 524 aa13.89□□□□□ -0.19
PTCD1-205ENST00000485746 ARL2P36404 184 aa13.89□□□□□ -0.19
PTCD1-205ENST00000485746 BMPR1AP36894 532 aa13.89□□□□□ -0.19
PTCD1-205ENST00000485746 FAM189BP81408 668 aa13.89□□□□□ -0.19
PTCD1-205ENST00000485746 IL17AQ16552 155 aa13.89□□□□□ -0.19
PTCD1-205ENST00000485746 TMEM132AQ24JP5 1023 aa13.89□□□□□ -0.19
PTCD1-205ENST00000485746 ARL6IP4Q66PJ3 421 aaKnown RBP13.89□□□□□ -0.19
PTCD1-205ENST00000485746 SPRYD3Q8NCJ5 442 aa13.89□□□□□ -0.19
PTCD1-205ENST00000485746 RASSF8Q8NHQ8 419 aa13.89□□□□□ -0.19
PTCD1-205ENST00000485746 BHMT2Q9H2M3 363 aa13.89□□□□□ -0.19
PTCD1-205ENST00000485746 IFT122Q9HBG6 1241 aa13.89□□□□□ -0.19
PTCD1-205ENST00000485746 AAASQ9NRG9 546 aa13.89□□□□□ -0.19
PTCD1-205ENST00000485746 MTCH2Q9Y6C9 303 aa13.89□□□□□ -0.19
PTCD1-205ENST00000485746 LAMA3Q16787 3333 aa13.88□□□□□ -0.19
PTCD1-205ENST00000485746 A0A0U1RQF3 1178 aa13.88□□□□□ -0.19
PTCD1-205ENST00000485746 STX6O43752 255 aa13.88□□□□□ -0.19
PTCD1-205ENST00000485746 SSBP05455 408 aaKnown RBP eCLIP13.88□□□□□ -0.19
PTCD1-205ENST00000485746 RB1P06400 928 aa13.88□□□□□ -0.19
PTCD1-205ENST00000485746 FGFR1P11362 822 aa13.88□□□□□ -0.19
PTCD1-205ENST00000485746 SF3A1Q15459 793 aaKnown RBP13.88□□□□□ -0.19
PTCD1-205ENST00000485746 ECM1Q16610 540 aa13.88□□□□□ -0.19
PTCD1-205ENST00000485746 ZBTB8OSQ8IWT0 167 aa13.88□□□□□ -0.19
PTCD1-205ENST00000485746 ASAP3Q8TDY4 903 aa13.88□□□□□ -0.19
PTCD1-205ENST00000485746 IFT74Q96LB3 600 aa13.88□□□□□ -0.19
PTCD1-205ENST00000485746 PLIN2Q99541 437 aa13.88□□□□□ -0.19
PTCD1-205ENST00000485746 C11orf84Q9BUA3 381 aaPredicted RBP13.88□□□□□ -0.19
PTCD1-205ENST00000485746 GPRC5CQ9NQ84 441 aa13.88□□□□□ -0.19
PTCD1-205ENST00000485746 LMCD1Q9NZU5 365 aa13.88□□□□□ -0.19
PTCD1-205ENST00000485746 MRPL42Q9Y6G3 142 aaKnown RBP13.88□□□□□ -0.19
PTCD1-205ENST00000485746 E9PMD0 336 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 H3BNC9 293 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 CSPG5O95196 566 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 EYA4O95677 639 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 EOMESO95936 686 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 LIG1P18858 919 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 CYP11B2P19099 503 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 GLRA2P23416 452 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 UBA7P41226 1012 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 RAB27AP51159 221 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 PTENP60484 403 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 CEBPZQ03701 1054 aaKnown RBP13.87□□□□□ -0.19
PTCD1-205ENST00000485746 CAPSQ13938 189 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 LONRF3Q496Y0 759 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 CABP7Q86V35 215 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 DEPTORQ8TB45 409 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 PGBD4Q96DM1 585 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 CALML4Q96GE6 196 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 PLVAPQ9BX97 442 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 TMEM117Q9H0C3 514 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 NT5C3AQ9H0P0 336 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 ZSCAN16Q9H4T2 348 aaPredicted RBP13.87□□□□□ -0.19
PTCD1-205ENST00000485746 MINDY3Q9H8M7 445 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 PCDHB12Q9Y5F1 795 aa13.87□□□□□ -0.19
PTCD1-205ENST00000485746 LAMA2P24043 3122 aaKnown RBP13.87□□□□□ -0.19
PTCD1-205ENST00000485746 MICAL3Q7RTP6 2002 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 EVPLQ92817 2033 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 LPXNO60711 386 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 POU3F3P20264 500 aaPredicted RBP13.86□□□□□ -0.19
PTCD1-205ENST00000485746 AXLP30530 894 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 POU5F1BQ06416 359 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 RESTQ13127 1097 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 PPP2R5AQ15172 486 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 PCBP1Q15365 356 aaKnown RBP eCLIP13.86□□□□□ -0.19
PTCD1-205ENST00000485746 FOXD4L5Q5VV16 416 aaPredicted RBP13.86□□□□□ -0.19
PTCD1-205ENST00000485746 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.86□□□□□ -0.19
PTCD1-205ENST00000485746 CRIPAKQ8N1N5 446 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 HELQQ8TDG4 1101 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 FOXD4L4Q8WXT5 416 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms