RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 TJP2Q9UDY2 1190 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 PCDHA4Q9UN74 947 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 CSADQ9Y600 493 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 COL4A4P53420 1690 aaPredicted RBP3.91□□□□□ -1.78
SMC6-208ENST00000481708 ANP32CO43423 234 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 MTA2O94776 668 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 DLGAP3O95886 979 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 TBX18O95935 607 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 ALBP02768 609 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 PTPRAP18433 802 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 LSSP48449 732 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 CACNB2Q08289 660 aaPredicted RBP3.91□□□□□ -1.78
SMC6-208ENST00000481708 TAF5Q15542 800 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 TAF11Q15544 211 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 LRRFIP1Q32MZ4 808 aaKnown RBP3.91□□□□□ -1.78
SMC6-208ENST00000481708 LCE2CQ5TA81 110 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 OVCH1Q7RTY7 1134 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 GRAMD1CQ8IYS0 662 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 VWCEQ96DN2 955 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 COL25A1Q9BXS0 654 aaPredicted RBP3.91□□□□□ -1.78
SMC6-208ENST00000481708 SEMA4AQ9H3S1 761 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 OXSMQ9NWU1 459 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 ITGB1BP2Q9UKP3 347 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 KMT2EQ8IZD2 1858 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 SYNDIG1LA6NDD5 238 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 DCDC2CA8MYV0 355 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 ARVCFO00192 962 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 GSTP1P09211 210 aaKnown RBP3.91□□□□□ -1.78
SMC6-208ENST00000481708 PLCG1P19174 1290 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 CCND1P24385 295 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 LIFRP42702 1097 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 KIAA0753Q2KHM9 967 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 C12orf40Q86WS4 652 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 CPOQ8IVL8 374 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 TRMT2AQ8IZ69 625 aaKnown RBP3.91□□□□□ -1.78
SMC6-208ENST00000481708 PRR18Q8N4B5 295 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 STON2Q8WXE9 905 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 CWC25Q9NXE8 425 aaPredicted RBP3.91□□□□□ -1.78
SMC6-208ENST00000481708 B3GALT2O43825 422 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 EPXP11678 715 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 OSMP13725 252 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 TSHRP16473 764 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 CNTFP26441 200 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 OAS2P29728 719 aaKnown RBP3.91□□□□□ -1.78
SMC6-208ENST00000481708 TERF2Q15554 542 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 NPNTQ6UXI9 565 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 SNX32Q86XE0 403 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 MICALL1Q8N3F8 863 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 RPGRQ92834 1020 aaKnown RBP3.91□□□□□ -1.78
SMC6-208ENST00000481708 TTC14Q96N46 770 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 SORBS1Q9BX66 1292 aaKnown RBP3.91□□□□□ -1.78
SMC6-208ENST00000481708 GJB4Q9NTQ9 266 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 CGGBP1Q9UFW8 167 aaPredicted RBP3.91□□□□□ -1.78
SMC6-208ENST00000481708 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.91□□□□□ -1.78
SMC6-208ENST00000481708 MINPP1Q9UNW1 487 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 PCDHA11Q9Y5I1 949 aa3.91□□□□□ -1.78
SMC6-208ENST00000481708 IGSF1Q8N6C5 1336 aa3.9□□□□□ -1.78
SMC6-208ENST00000481708 EIF3FO00303 357 aaPredicted RBP3.9□□□□□ -1.78
SMC6-208ENST00000481708 LCP1P13796 627 aa3.9□□□□□ -1.78
SMC6-208ENST00000481708 GRK4P32298 578 aa3.9□□□□□ -1.78
SMC6-208ENST00000481708 IKBKEQ14164 716 aa3.9□□□□□ -1.78
SMC6-208ENST00000481708 POSTNQ15063 836 aa3.9□□□□□ -1.78
SMC6-208ENST00000481708 SLC14A2Q15849 920 aa3.9□□□□□ -1.78
SMC6-208ENST00000481708 DDB1Q16531 1140 aa3.9□□□□□ -1.78
SMC6-208ENST00000481708 TMEM177Q53S58 311 aa3.9□□□□□ -1.78
SMC6-208ENST00000481708 PDZD4Q76G19 769 aaPredicted RBP3.9□□□□□ -1.78
SMC6-208ENST00000481708 CCT6BQ92526 530 aa3.9□□□□□ -1.78
SMC6-208ENST00000481708 SLC5A5Q92911 643 aa3.9□□□□□ -1.78
SMC6-208ENST00000481708 ACDQ96AP0 544 aa3.9□□□□□ -1.78
SMC6-208ENST00000481708 RNF38Q9H0F5 515 aa3.9□□□□□ -1.78
SMC6-208ENST00000481708 TMEM60Q9H2L4 133 aa3.9□□□□□ -1.78
SMC6-208ENST00000481708 PRO3102Q9H379 93 aa3.9□□□□□ -1.78
SMC6-208ENST00000481708 NAV1Q8NEY1 1877 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 PRAMEF27A3QJZ7 478 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 CNOT4O95628 575 aaKnown RBP3.9□□□□□ -1.79
SMC6-208ENST00000481708 PFKPQ01813 784 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 PKN2Q16513 984 aaKnown RBP3.9□□□□□ -1.79
SMC6-208ENST00000481708 HIBCHQ6NVY1 386 aaPredicted RBP3.9□□□□□ -1.79
SMC6-208ENST00000481708 SLCO4C1Q6ZQN7 724 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 CDH24Q86UP0 819 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 ESX1Q8N693 406 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 ZMAT2Q96NC0 199 aaKnown RBP3.9□□□□□ -1.79
SMC6-208ENST00000481708 TSPAN18Q96SJ8 248 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 SYT17Q9BSW7 474 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 C22orf23Q9BZE7 217 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 CSRNP2Q9H175 543 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 KIAA1586Q9HCI6 787 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 JPH1Q9HDC5 661 aaPredicted RBP3.9□□□□□ -1.79
SMC6-208ENST00000481708 MKS1Q9NXB0 559 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 CORO2BQ9UQ03 480 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 B4E171 279 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 K7ENM7 598 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 DDX3XO00571 662 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMC6-208ENST00000481708 TIPRLO75663 272 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 TM4SF1P30408 202 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 PPP2R3AQ06190 1150 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 TBX2Q13207 712 aaPredicted RBP3.9□□□□□ -1.79
SMC6-208ENST00000481708 COL9A3Q14050 684 aaPredicted RBP3.9□□□□□ -1.79
SMC6-208ENST00000481708 CCDC30Q5VVM6 783 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 GTF2IRD2BQ6EKJ0 949 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms