RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 COL4A6Q14031 1691 aa23.06■■□□□ 1.28
PKP4-209ENST00000479398 SFPQP23246 707 aaKnown RBP eCLIP23.06■■□□□ 1.283e-6■□□□□ 9.6
PKP4-209ENST00000479398 ARL2P36404 184 aa23.06■■□□□ 1.28
PKP4-209ENST00000479398 ECM1Q16610 540 aa23.06■■□□□ 1.28
PKP4-209ENST00000479398 POTEGQ6S5H5 508 aa23.06■■□□□ 1.28
PKP4-209ENST00000479398 BRAPQ7Z569 592 aa23.06■■□□□ 1.28
PKP4-209ENST00000479398 SRGAP1Q7Z6B7 1085 aa23.06■■□□□ 1.28
PKP4-209ENST00000479398 CMTR2Q8IYT2 770 aaKnown RBP23.06■■□□□ 1.28
PKP4-209ENST00000479398 PPM1EQ8WY54 764 aa23.06■■□□□ 1.28
PKP4-209ENST00000479398 TMEM161AQ9NX61 479 aa23.06■■□□□ 1.28
PKP4-209ENST00000479398 LMCD1Q9NZU5 365 aa23.06■■□□□ 1.28
PKP4-209ENST00000479398 VPS37CA5D8V6 355 aaPredicted RBP23.05■■□□□ 1.28
PKP4-209ENST00000479398 SYT1P21579 422 aa23.05■■□□□ 1.28
PKP4-209ENST00000479398 CCDC85BQ15834 202 aaPredicted RBP23.05■■□□□ 1.28
PKP4-209ENST00000479398 FAM102BQ5T8I3 360 aa23.05■■□□□ 1.28
PKP4-209ENST00000479398 RNF149Q8NC42 400 aa23.05■■□□□ 1.28
PKP4-209ENST00000479398 CLP1Q92989 425 aaKnown RBP23.05■■□□□ 1.28
PKP4-209ENST00000479398 FOXD4L1Q9NU39 408 aa23.05■■□□□ 1.28
PKP4-209ENST00000479398 DACT1Q9NYF0 836 aa23.05■■□□□ 1.28
PKP4-209ENST00000479398 PRRC2BQ5JSZ5 2229 aaKnown RBP23.04■■□□□ 1.28
PKP4-209ENST00000479398 A0A0U1RQF3 1178 aa23.04■■□□□ 1.28
PKP4-209ENST00000479398 LINC00271P0C7V0 271 aa23.04■■□□□ 1.28
PKP4-209ENST00000479398 BMPR1AP36894 532 aa23.04■■□□□ 1.28
PKP4-209ENST00000479398 GATMP50440 423 aa23.04■■□□□ 1.28
PKP4-209ENST00000479398 POU5F1BQ06416 359 aa23.04■■□□□ 1.28
PKP4-209ENST00000479398 ARL6IP4Q66PJ3 421 aaKnown RBP23.04■■□□□ 1.28
PKP4-209ENST00000479398 CATSPER4Q7RTX7 472 aa23.04■■□□□ 1.28
PKP4-209ENST00000479398 ECHDC2Q86YB7 292 aa23.04■■□□□ 1.28
PKP4-209ENST00000479398 SNX29Q8TEQ0 813 aa23.04■■□□□ 1.28
PKP4-209ENST00000479398 GDPD5Q8WTR4 605 aa23.04■■□□□ 1.28
PKP4-209ENST00000479398 KIAA1024Q9UPX6 916 aa23.04■■□□□ 1.28
PKP4-209ENST00000479398 NLRC5Q86WI3 1866 aa23.04■■□□□ 1.28
PKP4-209ENST00000479398 H3BNC9 293 aa23.03■■□□□ 1.28
PKP4-209ENST00000479398 USO1O60763 962 aaKnown RBP23.03■■□□□ 1.28
PKP4-209ENST00000479398 RB1P06400 928 aa23.03■■□□□ 1.28
PKP4-209ENST00000479398 CDC25AP30304 524 aa23.03■■□□□ 1.28
PKP4-209ENST00000479398 TFDP1Q14186 410 aa23.03■■□□□ 1.28
PKP4-209ENST00000479398 PAN2Q504Q3 1202 aaKnown RBP23.03■■□□□ 1.28
PKP4-209ENST00000479398 KRT79Q5XKE5 535 aa23.03■■□□□ 1.28
PKP4-209ENST00000479398 MINDY3Q9H8M7 445 aa23.03■■□□□ 1.28
PKP4-209ENST00000479398 RWDD3Q9Y3V2 267 aa23.03■■□□□ 1.28
PKP4-209ENST00000479398 RALGAPA2Q2PPJ7 1873 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 FNDC1Q4ZHG4 1894 aaPredicted RBP23.02■■□□□ 1.28
PKP4-209ENST00000479398 TRANK1O15050 2925 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 ARHGEF35A5YM69 484 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 PP2D1A8MPX8 630 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 C5orf67F2Z3F1 127 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 EOMESO95936 686 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 CYP11B2P19099 503 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 GLRA2P23416 452 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 PHKA2P46019 1235 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 PTENP60484 403 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 GPM6BQ13491 265 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 PADI6Q6TGC4 694 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 MAEAQ7L5Y9 396 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 MICALL1Q8N3F8 863 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 MCPH1Q8NEM0 835 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 ASAP3Q8TDY4 903 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 TRAIPQ9BWF2 469 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 DDX19AQ9NUU7 478 aaKnown RBP23.02■■□□□ 1.28
PKP4-209ENST00000479398 MRPL42Q9Y6G3 142 aaKnown RBP23.02■■□□□ 1.28
PKP4-209ENST00000479398 EYSQ5T1H1 3165 aa23.02■■□□□ 1.28
PKP4-209ENST00000479398 FGFR1P11362 822 aa23.01■■□□□ 1.27
PKP4-209ENST00000479398 CTNNB1P35222 781 aa23.01■■□□□ 1.27
PKP4-209ENST00000479398 IFNLR1Q8IU57 520 aaPredicted RBP23.01■■□□□ 1.27
PKP4-209ENST00000479398 MMTAG2Q9BU76 263 aaKnown RBP23.01■■□□□ 1.27
PKP4-209ENST00000479398 POLR3FQ9H1D9 316 aaPredicted RBP23.01■■□□□ 1.27
PKP4-209ENST00000479398 PIN4Q9Y237 131 aaKnown RBP23.01■■□□□ 1.27
PKP4-209ENST00000479398 VWA3AA6NCI4 1184 aa23■■□□□ 1.27
PKP4-209ENST00000479398 TBKBP1A7MCY6 615 aa23■■□□□ 1.27
PKP4-209ENST00000479398 HOXA2O43364 376 aa23■■□□□ 1.27
PKP4-209ENST00000479398 CAPSQ13938 189 aa23■■□□□ 1.27
PKP4-209ENST00000479398 TWF2Q6IBS0 349 aaKnown RBP23■■□□□ 1.27
PKP4-209ENST00000479398 ZNF598Q86UK7 904 aaKnown RBP23■■□□□ 1.27
PKP4-209ENST00000479398 HSCBQ8IWL3 235 aa23■■□□□ 1.27
PKP4-209ENST00000479398 PLVAPQ9BX97 442 aa23■■□□□ 1.27
PKP4-209ENST00000479398 BHMT2Q9H2M3 363 aa23■■□□□ 1.27
PKP4-209ENST00000479398 GPRC5CQ9NQ84 441 aa23■■□□□ 1.27
PKP4-209ENST00000479398 AGPAT5Q9NUQ2 364 aa23■■□□□ 1.27
PKP4-209ENST00000479398 RNF19AQ9NV58 838 aa23■■□□□ 1.27
PKP4-209ENST00000479398 DNM3Q9UQ16 869 aa23■■□□□ 1.27
PKP4-209ENST00000479398 BMP15O95972 392 aa22.99■■□□□ 1.27
PKP4-209ENST00000479398 SKIP12755 728 aa22.99■■□□□ 1.27
PKP4-209ENST00000479398 HOXA11P31270 313 aaPredicted RBP22.99■■□□□ 1.27
PKP4-209ENST00000479398 RESTQ13127 1097 aa22.99■■□□□ 1.27
PKP4-209ENST00000479398 PCBP1Q15365 356 aaKnown RBP eCLIP22.99■■□□□ 1.276e-6■■■■□ 21.3
PKP4-209ENST00000479398 SF3A1Q15459 793 aaKnown RBP22.99■■□□□ 1.27
PKP4-209ENST00000479398 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.99■■□□□ 1.276e-6■□□□□ 8.7
PKP4-209ENST00000479398 CASD1Q96PB1 797 aa22.99■■□□□ 1.27
PKP4-209ENST00000479398 NFKBIZQ9BYH8 718 aa22.99■■□□□ 1.27
PKP4-209ENST00000479398 TMEM117Q9H0C3 514 aa22.99■■□□□ 1.27
PKP4-209ENST00000479398 MTMR6Q9Y217 621 aa22.99■■□□□ 1.27
PKP4-209ENST00000479398 COL4A4P53420 1690 aaPredicted RBP22.99■■□□□ 1.27
PKP4-209ENST00000479398 PRUNE2Q8WUY3 3088 aa22.98■■□□□ 1.27
PKP4-209ENST00000479398 E9PMD0 336 aa22.98■■□□□ 1.27
PKP4-209ENST00000479398 ZNF623O75123 536 aa22.98■■□□□ 1.27
PKP4-209ENST00000479398 EYA4O95677 639 aa22.98■■□□□ 1.27
PKP4-209ENST00000479398 RNF169Q8NCN4 708 aa22.98■■□□□ 1.27
PKP4-209ENST00000479398 MRPL38Q96DV4 380 aaKnown RBP22.98■■□□□ 1.27
PKP4-209ENST00000479398 C11orf84Q9BUA3 381 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms