RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 WDR78Q5VTH9 848 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 LRCH2Q5VUJ6 765 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 RRAGBQ5VZM2 374 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 SASS6Q6UVJ0 657 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 KRBA2Q6ZNG9 492 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 RBM43Q6ZSC3 357 aaKnown RBP7.42□□□□□ -1.22
VAMP3-202ENST00000470357 NECAB2Q7Z6G3 386 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 CABP7Q86V35 215 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.42□□□□□ -1.22
VAMP3-202ENST00000470357 TDHQ8IZJ6 230 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 ANKRD13CQ8N6S4 541 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 FAM133AQ8N9E0 248 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 GIMAP8Q8ND71 665 aaPredicted RBP7.42□□□□□ -1.22
VAMP3-202ENST00000470357 CNNM3Q8NE01 707 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 RDM1Q8NG50 284 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 NEK9Q8TD19 979 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 HAS1Q92839 578 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 SLC5A5Q92911 643 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 LENG9Q96B70 501 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 GUCD1Q96NT3 240 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 ZNF577Q9BSK1 485 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 TEKT3Q9BXF9 490 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 GTPBP4Q9BZE4 634 aaKnown RBP7.42□□□□□ -1.22
VAMP3-202ENST00000470357 GZF1Q9H116 711 aaPredicted RBP7.42□□□□□ -1.22
VAMP3-202ENST00000470357 GOLPH3LQ9H4A5 285 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 TXNRD2Q9NNW7 524 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 DISC1Q9NRI5 854 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 COL20A1Q9P218 1284 aa7.42□□□□□ -1.22
VAMP3-202ENST00000470357 DIS3Q9Y2L1 958 aaKnown RBP7.42□□□□□ -1.22
VAMP3-202ENST00000470357 DOCK3Q8IZD9 2030 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 DNAJC25-GNG10A0A024R161 153 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 SLC15A5A6NIM6 579 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 MSH4O15457 936 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 BNIP3LO60238 219 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 DKC1O60832 514 aaKnown RBP eCLIP7.41□□□□□ -1.22
VAMP3-202ENST00000470357 SMC2O95347 1197 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 TGFB3P10600 412 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 SYN1P17600 705 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 SFNP31947 248 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 MRPS9P82933 396 aaKnown RBP7.41□□□□□ -1.22
VAMP3-202ENST00000470357 GRIN1Q05586 938 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 IL17AQ16552 155 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 PLEKHH3Q7Z736 793 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 NLRP8Q86W28 1048 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 C7orf61Q8IZ16 206 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 MSL3Q8N5Y2 521 aaKnown RBP7.41□□□□□ -1.22
VAMP3-202ENST00000470357 SNX29Q8TEQ0 813 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 CCDC47Q96A33 483 aaKnown RBP7.41□□□□□ -1.22
VAMP3-202ENST00000470357 PBXIP1Q96AQ6 731 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 ABHD17AQ96GS6 310 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 EPSTI1Q96J88 318 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 INPP4AQ96PE3 977 aaPredicted RBP7.41□□□□□ -1.22
VAMP3-202ENST00000470357 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.41□□□□□ -1.22
VAMP3-202ENST00000470357 KCNH7Q9NS40 1196 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 GJD2Q9UKL4 321 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 ZMIZ1Q9ULJ6 1067 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 MRVI1Q9Y6F6 885 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 NFASCO94856 1347 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 DNAH12Q6ZR08 3092 aa7.41□□□□□ -1.22
VAMP3-202ENST00000470357 SYCE3A1L190 88 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 PSMD10O75832 226 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 ATG7O95352 703 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 ITGB5P18084 799 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 MX2P20592 715 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 EDNRBP24530 442 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 RPA1P27694 616 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 ICAM3P32942 547 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 CCT6AP40227 531 aaKnown RBP7.4□□□□□ -1.22
VAMP3-202ENST00000470357 JAK3P52333 1124 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 SRSF11Q05519 484 aaKnown RBP7.4□□□□□ -1.22
VAMP3-202ENST00000470357 ELOAQ14241 798 aaKnown RBP7.4□□□□□ -1.22
VAMP3-202ENST00000470357 POSTNQ15063 836 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 EPHA7Q15375 998 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 LONRF3Q496Y0 759 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 SPECC1Q5M775 1068 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 HYIQ5T013 277 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 FAM109BQ6ICB4 259 aaPredicted RBP7.4□□□□□ -1.22
VAMP3-202ENST00000470357 ZNF746Q6NUN9 644 aaPredicted RBP7.4□□□□□ -1.22
VAMP3-202ENST00000470357 LRSAM1Q6UWE0 723 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 LRRC69Q6ZNQ3 347 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 GPR142Q7Z601 462 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 DPP9Q86TI2 863 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 SMAP1Q8IYB5 467 aaPredicted RBP7.4□□□□□ -1.22
VAMP3-202ENST00000470357 PDILTQ8N807 584 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 TRIML1Q8N9V2 468 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 IL31RAQ8NI17 732 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 CYP2W1Q8TAV3 490 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 MORC4Q8TE76 937 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 WHAMMQ8TF30 809 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 STK32AQ8WU08 396 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 SOCS4Q8WXH5 440 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 DHX58Q96C10 678 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 SENP7Q9BQF6 1050 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 POLR3CQ9BUI4 534 aaPredicted RBP7.4□□□□□ -1.22
VAMP3-202ENST00000470357 C2orf49Q9BVC5 232 aaPredicted RBP7.4□□□□□ -1.22
VAMP3-202ENST00000470357 PHACTR1Q9C0D0 580 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 PORCNQ9H237 461 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 AGO4Q9HCK5 861 aaKnown RBP7.4□□□□□ -1.22
VAMP3-202ENST00000470357 TUFT1Q9NNX1 390 aa7.4□□□□□ -1.22
VAMP3-202ENST00000470357 ANO10Q9NW15 660 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms