RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 SRBD1Q8N5C6 995 aaKnown RBP16.87■□□□□ 0.29
BRAT1-204ENST00000469750 INTS2Q9H0H0 1204 aaKnown RBP16.87■□□□□ 0.29
BRAT1-204ENST00000469750 RPAP3Q9H6T3 665 aaPredicted RBP16.87■□□□□ 0.29
BRAT1-204ENST00000469750 TSPY1Q01534 308 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 EXOSC10Q01780 885 aaKnown RBP16.87■□□□□ 0.29
BRAT1-204ENST00000469750 SPATA33Q96N06 139 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 OSBPL5Q9H0X9 879 aaPredicted RBP16.87■□□□□ 0.29
BRAT1-204ENST00000469750 ABCB6Q9NP58 842 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 ARHGEF40Q8TER5 1519 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 CASP2P42575 452 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 STRIP1Q5VSL9 837 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 TRIM68Q6AZZ1 485 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 GDAP1Q8TB36 358 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 DHX38Q92620 1227 aaKnown RBP16.87■□□□□ 0.29
BRAT1-204ENST00000469750 PCDHA10Q9Y5I2 948 aa16.87■□□□□ 0.29
BRAT1-204ENST00000469750 CA4P22748 312 aa16.86■□□□□ 0.29
BRAT1-204ENST00000469750 GFPT1Q06210 699 aaPredicted RBP16.86■□□□□ 0.29
BRAT1-204ENST00000469750 SHC4Q6S5L8 630 aa16.86■□□□□ 0.29
BRAT1-204ENST00000469750 USP42Q9H9J4 1324 aaKnown RBP16.86■□□□□ 0.29
BRAT1-204ENST00000469750 NR1D1P20393 614 aa16.86■□□□□ 0.29
BRAT1-204ENST00000469750 DNAJC17Q9NVM6 304 aaKnown RBP16.86■□□□□ 0.29
BRAT1-204ENST00000469750 MADDQ8WXG6 1647 aa16.86■□□□□ 0.29
BRAT1-204ENST00000469750 F8W8V4 182 aa16.86■□□□□ 0.29
BRAT1-204ENST00000469750 ACSL3O95573 720 aa16.86■□□□□ 0.29
BRAT1-204ENST00000469750 CHMP6Q96FZ7 201 aa16.86■□□□□ 0.29
BRAT1-204ENST00000469750 VPS39Q96JC1 886 aa16.86■□□□□ 0.29
BRAT1-204ENST00000469750 TRIM4Q9C037 500 aa16.86■□□□□ 0.29
BRAT1-204ENST00000469750 ZNRF3Q9ULT6 936 aa16.86■□□□□ 0.29
BRAT1-204ENST00000469750 SETBP1Q9Y6X0 1596 aa16.86■□□□□ 0.29
BRAT1-204ENST00000469750 OPHN1O60890 802 aa16.86■□□□□ 0.29
BRAT1-204ENST00000469750 NFKBIAP25963 317 aa16.86■□□□□ 0.29
BRAT1-204ENST00000469750 PPARGP37231 505 aaPredicted RBP16.86■□□□□ 0.29
BRAT1-204ENST00000469750 DRAP1Q14919 205 aaPredicted RBP16.86■□□□□ 0.29
BRAT1-204ENST00000469750 CEP55Q53EZ4 464 aa16.86■□□□□ 0.29
BRAT1-204ENST00000469750 TMTC4Q5T4D3 741 aa16.86■□□□□ 0.29
BRAT1-204ENST00000469750 TTC39CQ8N584 583 aa16.86■□□□□ 0.29
BRAT1-204ENST00000469750 RRP15Q9Y3B9 282 aaKnown RBP16.86■□□□□ 0.29
BRAT1-204ENST00000469750 CHRNA5P30532 468 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 ARL4CP56559 192 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 EN1Q05925 392 aaPredicted RBP16.85■□□□□ 0.29
BRAT1-204ENST00000469750 MTMR4Q9NYA4 1195 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 SPDYE2BA6NHP3 402 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 ASB14A6NK59 587 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 HMGB1P1B2RPK0 211 aaPredicted RBP16.85■□□□□ 0.29
BRAT1-204ENST00000469750 SPDYE6P0CI01 402 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 COG7P83436 770 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 VPS72Q15906 364 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 SBK1Q52WX2 424 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 FASTKD5Q7L8L6 764 aaKnown RBP16.85■□□□□ 0.29
BRAT1-204ENST00000469750 SAAL1Q96ER3 474 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 EPS15L1Q9UBC2 864 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 CAMTA2O94983 1202 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 EYA4O95677 639 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 PRR5LQ6MZQ0 368 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 SCN4BQ8IWT1 228 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 ZBED2Q9BTP6 218 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 HEMGNQ9BXL5 484 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 GCOM2Q9BZD3 368 aaPredicted RBP16.85■□□□□ 0.29
BRAT1-204ENST00000469750 SAYSD1Q9NPB0 183 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 LMCD1Q9NZU5 365 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 KLHL8Q9P2G9 620 aaPredicted RBP16.85■□□□□ 0.29
BRAT1-204ENST00000469750 SLC9A2Q9UBY0 812 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 SNX24Q9Y343 169 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 FIS1Q9Y3D6 152 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 BNIP3LO60238 219 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 KRT37O76014 449 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 SDC4P31431 198 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 SOX5P35711 763 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 HMGCS2P54868 508 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 PDIA5Q14554 519 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 KLC3Q6P597 504 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 ZNF564Q8TBZ8 553 aaPredicted RBP16.85■□□□□ 0.29
BRAT1-204ENST00000469750 ABCA6Q8N139 1617 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 FLT1P17948 1338 aa16.85■□□□□ 0.29
BRAT1-204ENST00000469750 GUCY1A2P33402 732 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 SNCBQ16143 134 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 ENOSF1Q7L5Y1 443 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 NDUFAF2Q8N183 169 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 GPD1LQ8N335 351 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 SLITRK6Q9H5Y7 841 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 M0QYV0 167 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 GNA15P30679 374 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 TUFT1Q9NNX1 390 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 ZNF543Q08ER8 600 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 ZBTB17Q13105 803 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 HAUS6Q7Z4H7 955 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 TUBB6Q9BUF5 446 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 STAP1Q9ULZ2 295 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 CSF1RP07333 972 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 PAMP19021 973 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 SLC12A1Q13621 1099 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 KCNB1Q14721 858 aa16.84■□□□□ 0.29
BRAT1-204ENST00000469750 ZNF512BQ96KM6 892 aaPredicted RBP16.84■□□□□ 0.29
BRAT1-204ENST00000469750 ATG16L1Q676U5 607 aa16.83■□□□□ 0.29
BRAT1-204ENST00000469750 KCNV1Q6PIU1 500 aa16.83■□□□□ 0.29
BRAT1-204ENST00000469750 DDX27Q96GQ7 796 aaKnown RBP16.83■□□□□ 0.29
BRAT1-204ENST00000469750 NUP85Q9BW27 656 aa16.83■□□□□ 0.29
BRAT1-204ENST00000469750 RBAKQ9NYW8 714 aaPredicted RBP16.83■□□□□ 0.29
BRAT1-204ENST00000469750 WDR91A4D1P6 747 aa16.83■□□□□ 0.29
BRAT1-204ENST00000469750 AP3M2P53677 418 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms