RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 A0A1W2PQC6 194 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 A0A1W2PQD8 194 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 A0A1W2PQU0 124 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 ANKRD34BA5PLL1 514 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 VIL1P09327 827 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 NAT2P11245 290 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 TRIM27P14373 513 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 CD247P20963 164 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 L1CAMP32004 1257 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 ZNF200P98182 395 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 SKOR2Q2VWA4 1001 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 NOL9Q5SY16 702 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 BEND3Q5T5X7 828 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 FOXB2Q5VYV0 432 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 UBE3BQ7Z3V4 1068 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 FRMD5Q7Z6J6 570 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 CNBD1Q8NA66 436 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 NINJ1Q92982 152 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 RCAN3Q9UKA8 241 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 SF3B6Q9Y3B4 125 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 CACNA1FO60840 1977 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 CACNA1SQ13698 1873 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 NRXN2Q9P2S2 1712 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 PXDNLA1KZ92 1463 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 C10orf71Q711Q0 1435 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 FFAR3O14843 346 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 NPHP1O15259 732 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 DDX58O95786 925 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 CELA3BP08861 270 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 NBPF7P0C2Y1 421 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 ITGA4P13612 1032 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 KCNA3P22001 575 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 CTCFP49711 727 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 NCKAP1LP55160 1127 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 GCKRQ14397 625 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 ALDH1L2Q3SY69 923 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 HEATR6Q6AI08 1181 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 CLEC4GQ6UXB4 293 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 KRT26Q7Z3Y9 468 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 C2CD5Q86YS7 1000 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 NIM1KQ8IY84 436 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 FIBCD1Q8N539 461 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 TMEM57Q8N5G2 664 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 SYT8Q8NBV8 401 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 PTCHD1Q96NR3 888 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 FCRL3Q96P31 734 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 CDC6Q99741 560 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 DHRS4Q9BTZ2 278 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 UTP14AQ9BVJ6 771 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 RNF38Q9H0F5 515 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 CWC25Q9NXE8 425 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 LRP2BPQ9P2M1 347 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 SUSD2Q9UGT4 822 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 ZNF652Q9Y2D9 606 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 LAMB2P55268 1798 aa5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 DDX60Q8IY21 1712 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-203ENST00000460928 SLX4Q8IY92 1834 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 CUL9Q8IWT3 2517 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 TRAV20A0A0B4J274 112 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 RFPL3O75679 317 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 TBC1D8O95759 1140 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 EPHX1P07099 455 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 POU4F1Q01851 419 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 PABPC4Q13310 644 aaKnown RBP eCLIP5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 TM4SF20Q53R12 229 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 FAM209AQ5JX71 171 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 DBX2Q6ZNG2 339 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 DHX37Q8IY37 1157 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 ANP32BQ92688 251 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 BRF1Q92994 677 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 KISS1RQ969F8 398 aaPredicted RBP5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 ZNF622Q969S3 477 aaKnown RBP eCLIP5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 PPP1R14AQ96A00 147 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 MFSD3Q96ES6 412 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 KAZALD1Q96I82 304 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 SUCLG2Q96I99 432 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 EXOC2Q96KP1 924 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 IPO9Q96P70 1041 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 MEIS3Q99687 375 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 HAUS7Q99871 368 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 ARHGEF4Q9NR80 690 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 DDX56Q9NY93 547 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 ZNF451Q9Y4E5 1061 aa5.83□□□□□ -1.48
ATPAF1-203ENST00000460928 CBFA2T2O43439 604 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 HSP90AA1P07900 732 aaKnown RBP5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 MYCLP1P12525 358 aaPredicted RBP5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 LIMS1P48059 325 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 KRTAP10-2P60368 255 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 PPP2R2AP63151 447 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 ST5P78524 1137 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 NEXNQ0ZGT2 675 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 VWA3BQ502W6 1294 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 HSP90AB3PQ58FF7 597 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 ZKSCAN2Q63HK3 967 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 RCSD1Q6JBY9 416 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 ATF7IPQ6VMQ6 1270 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 ADAT2Q7Z6V5 191 aaKnown RBP5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 SCUBE1Q8IWY4 988 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 ZDHHC14Q8IZN3 488 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 CCDC191Q8NCU4 936 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms