RNA–Protein interactions for RNA: ENST00000453040.5

CHL1-208, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 3,960 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-208ENST00000453040 ECE2O60344 883 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 PALMO75781 387 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 TJP3O95049 919 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 MMP13P45452 471 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 RHBDL3P58872 404 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 DYNC1I2Q13409 638 aaKnown RBP11.81□□□□□ -0.52
CHL1-208ENST00000453040 C2CD5Q86YS7 1000 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 DEPTORQ8TB45 409 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 TBC1D16Q8TBP0 767 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 CHMP6Q96FZ7 201 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 ECT2Q9H8V3 914 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 SNX3O60493 162 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 ADAM23O75077 832 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 GNAT2P19087 354 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 MCM7P33993 719 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 MARSP56192 900 aaKnown RBP11.81□□□□□ -0.52
CHL1-208ENST00000453040 PUM3Q15397 648 aaKnown RBP11.81□□□□□ -0.52
CHL1-208ENST00000453040 KIF6Q6ZMV9 814 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 CSGALNACT2Q8N6G5 542 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 SNX27Q96L92 541 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 CENPOQ9BU64 300 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 CIDEBQ9UHD4 219 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 SLC4A4Q9Y6R1 1079 aa11.81□□□□□ -0.52
CHL1-208ENST00000453040 GREB1LQ9C091 1923 aaPredicted RBP11.81□□□□□ -0.52
CHL1-208ENST00000453040 CYP2D7A0A087X1C5 515 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 WTIPA6NIX2 430 aaPredicted RBP11.8□□□□□ -0.52
CHL1-208ENST00000453040 USO1O60763 962 aaKnown RBP11.8□□□□□ -0.52
CHL1-208ENST00000453040 SCG2P13521 617 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 GTF2H1P32780 548 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 RTP1P59025 263 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 IFI16Q16666 785 aaKnown RBP11.8□□□□□ -0.52
CHL1-208ENST00000453040 SH3D19Q5HYK7 790 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 LRRC43Q8N309 656 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 SDR42E1Q8WUS8 393 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 DDX50Q9BQ39 737 aaKnown RBP11.8□□□□□ -0.52
CHL1-208ENST00000453040 CYP39A1Q9NYL5 469 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 VILLO15195 856 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 UQCRFS1P1P0C7P4 283 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 CDK4P11802 303 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 HARSP12081 509 aaKnown RBP11.8□□□□□ -0.52
CHL1-208ENST00000453040 TRIM21P19474 475 aaKnown RBP11.8□□□□□ -0.52
CHL1-208ENST00000453040 GUCY2FP51841 1108 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 LDHAL6AQ6ZMR3 332 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 KRT28Q7Z3Y7 464 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 FAM13CQ8NE31 585 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 EDEM3Q9BZQ6 932 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 RBM38Q9H0Z9 239 aaKnown RBP11.8□□□□□ -0.52
CHL1-208ENST00000453040 GANQ9H2C0 597 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 PACSIN2Q9UNF0 486 aaPredicted RBP11.8□□□□□ -0.52
CHL1-208ENST00000453040 NPHP3-ACAD11A0A0J9YXS1 232 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 RASSF7Q02833 373 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 SLC27A3Q5K4L6 730 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 IRGCQ6NXR0 463 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 DDX42Q86XP3 938 aaKnown RBP eCLIP11.8□□□□□ -0.52
CHL1-208ENST00000453040 STK32AQ8WU08 396 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 IRGQQ8WZA9 623 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 IL17RBQ9NRM6 502 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 AIPL1Q9NZN9 384 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 MYH11P35749 1972 aa11.8□□□□□ -0.52
CHL1-208ENST00000453040 SPDYE16A6NNV3 312 aaPredicted RBP11.79□□□□□ -0.52
CHL1-208ENST00000453040 BCRP11274 1271 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 BIRC3Q13489 604 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 CFAP221Q4G0U5 840 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 SPDYCQ5MJ68 293 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 CFAP58Q5T655 872 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 DCAF12L1Q5VU92 463 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 IRF2BP2Q7Z5L9 587 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 DNAJC1Q96KC8 554 aaKnown RBP11.79□□□□□ -0.52
CHL1-208ENST00000453040 CCDC42Q96M95 316 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 KRT12Q99456 494 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 SH3GLB2Q9NR46 395 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 CTNNAL1Q9UBT7 734 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 CLCN2P51788 898 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 KLC1Q07866 573 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 GKAP1Q5VSY0 366 aaPredicted RBP11.79□□□□□ -0.52
CHL1-208ENST00000453040 ANKRD13CQ8N6S4 541 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 ATP11CQ8NB49 1132 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 GAB3Q8WWW8 586 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 ANKS1AQ92625 1134 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 PNMA5Q96PV4 448 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 ARHGEF38Q9NXL2 777 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 BUB1O43683 1085 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 PLCG1P19174 1290 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 NEK3P51956 506 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 TBL3Q12788 808 aaKnown RBP11.79□□□□□ -0.52
CHL1-208ENST00000453040 OLFML1Q6UWY5 402 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 TUBGCP5Q96RT8 1024 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 DHX36Q9H2U1 1008 aaKnown RBP11.79□□□□□ -0.52
CHL1-208ENST00000453040 NR2E1Q9Y466 385 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 MROH5Q6ZUA9 1318 aa11.79□□□□□ -0.52
CHL1-208ENST00000453040 A0A087X0T9 212 aa11.78□□□□□ -0.52
CHL1-208ENST00000453040 OR6B1O95007 311 aa11.78□□□□□ -0.52
CHL1-208ENST00000453040 FAM228BP0C875 321 aa11.78□□□□□ -0.52
CHL1-208ENST00000453040 SLC5A1P13866 664 aa11.78□□□□□ -0.52
CHL1-208ENST00000453040 MATR3P43243 847 aaKnown RBP eCLIP11.78□□□□□ -0.52
CHL1-208ENST00000453040 COPS2P61201 443 aa11.78□□□□□ -0.52
CHL1-208ENST00000453040 TXNRD1Q16881 649 aa11.78□□□□□ -0.52
CHL1-208ENST00000453040 TREML1Q86YW5 311 aa11.78□□□□□ -0.52
CHL1-208ENST00000453040 SCUBE1Q8IWY4 988 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms