RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 MMP3P08254 477 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 RSPH10BP0C881 870 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 SRGAP2BP0DMP2 458 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 EEF2P13639 858 aaKnown RBP3.93□□□□□ -1.78
PMS1-215ENST00000447232 NFKB1P19838 968 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 USP5P45974 858 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 RBM25P49756 843 aaKnown RBP3.93□□□□□ -1.78
PMS1-215ENST00000447232 ITIH3Q06033 890 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 PSAPL1Q6NUJ1 521 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 CERS3Q8IU89 383 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 NACC1Q96RE7 527 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 APOL5Q9BWW9 433 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 TBC1D17Q9HA65 648 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 JPH1Q9HDC5 661 aaPredicted RBP3.93□□□□□ -1.78
PMS1-215ENST00000447232 RXFP3Q9NSD7 469 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 ZFATQ9P243 1243 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 HDAC6Q9UBN7 1215 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 FBXL21Q9UKT6 434 aa3.93□□□□□ -1.78
PMS1-215ENST00000447232 MRPL42Q9Y6G3 142 aaKnown RBP3.93□□□□□ -1.78
PMS1-215ENST00000447232 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.93□□□□□ -1.78
PMS1-215ENST00000447232 ZNF462Q96JM2 2506 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 TEP1Q99973 2627 aaKnown RBP3.92□□□□□ -1.78
PMS1-215ENST00000447232 GREB1LQ9C091 1923 aaPredicted RBP3.92□□□□□ -1.78
PMS1-215ENST00000447232 FSCN2O14926 492 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 ZBED4O75132 1171 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 IDH3AP50213 366 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 LIMK1P53667 647 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 BTG3Q14201 252 aaPredicted RBP3.92□□□□□ -1.78
PMS1-215ENST00000447232 SPECC1Q5M775 1068 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 PRR23CQ6ZRP0 262 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 PNMA5Q96PV4 448 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 NUP88Q99567 741 aaPredicted RBP3.92□□□□□ -1.78
PMS1-215ENST00000447232 COPRSQ9NQ92 184 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 CYP26B1Q9NR63 512 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 ZSCAN32Q9NX65 697 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 GMEB2Q9UKD1 530 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 LOC102724159A0A0B4J2E5 919 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 ZBTB42B2RXF5 422 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 HAS3O00219 553 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 DGKIO75912 1065 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 EOMESO95936 686 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 CYP2E1P05181 493 aaPredicted RBP3.92□□□□□ -1.78
PMS1-215ENST00000447232 TARSP26639 723 aaKnown RBP3.92□□□□□ -1.78
PMS1-215ENST00000447232 MTHFRP42898 656 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 UBE3AQ05086 875 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 PWP2Q15269 919 aaKnown RBP3.92□□□□□ -1.78
PMS1-215ENST00000447232 PDZD3Q86UT5 571 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 SERINC5Q86VE9 423 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 LRRC47Q8N1G4 583 aaKnown RBP3.92□□□□□ -1.78
PMS1-215ENST00000447232 ATRIPQ8WXE1 791 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 ZCCHC14Q8WYQ9 949 aaKnown RBP3.92□□□□□ -1.78
PMS1-215ENST00000447232 APBB2Q92870 758 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 COPS5Q92905 334 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 KCNK12Q9HB15 430 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 HOMER2Q9NSB8 354 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 SEMA4GQ9NTN9 838 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 CYP39A1Q9NYL5 469 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 SWAP70Q9UH65 585 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 PA2G4Q9UQ80 394 aaKnown RBP3.92□□□□□ -1.78
PMS1-215ENST00000447232 AKAP2Q9Y2D5 859 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 SIT1Q9Y3P8 196 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 FREM2Q5SZK8 3169 aa3.92□□□□□ -1.78
PMS1-215ENST00000447232 MYH7BA7E2Y1 1941 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 MIA3Q5JRA6 1907 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 C9orf172C9J069 976 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 NARSO43776 548 aaKnown RBP3.91□□□□□ -1.78
PMS1-215ENST00000447232 MICAL2O94851 1124 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 MAP3K6O95382 1288 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 POLR3DP05423 398 aaPredicted RBP3.91□□□□□ -1.78
PMS1-215ENST00000447232 THPOP40225 353 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 ERVFC1P60507 584 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 WDR43Q15061 677 aaKnown RBP eCLIP3.91□□□□□ -1.78
PMS1-215ENST00000447232 PPP2R5BQ15173 497 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 CCDC6Q16204 474 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 CSRP2Q16527 193 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 LARP1BQ659C4 914 aaKnown RBP3.91□□□□□ -1.78
PMS1-215ENST00000447232 PDE12Q6L8Q7 609 aaKnown RBP3.91□□□□□ -1.78
PMS1-215ENST00000447232 KIAA1841Q6NSI8 718 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 CES5AQ6NT32 575 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 CMTR2Q8IYT2 770 aaKnown RBP3.91□□□□□ -1.78
PMS1-215ENST00000447232 MIGA1Q8NAN2 632 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 GLIS3Q8NEA6 775 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 IFT43Q96FT9 208 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 CCDC17Q96LX7 622 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 KANSL2Q9H9L4 492 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 RNF146Q9NTX7 359 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 LRFN2Q9ULH4 789 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 SPTA1P02549 2419 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 KALRNO60229 2985 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 ANKRD17O75179 2603 aaKnown RBP3.91□□□□□ -1.78
PMS1-215ENST00000447232 PTPN13Q12923 2485 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 FANCIQ9NVI1 1328 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 OPLAHO14841 1288 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 DYRK3O43781 588 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 RGS9O75916 674 aaPredicted RBP3.91□□□□□ -1.78
PMS1-215ENST00000447232 KCNK5O95279 499 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 F2P00734 622 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 RETP07949 1114 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 UQCRFS1P1P0C7P4 283 aa3.91□□□□□ -1.78
PMS1-215ENST00000447232 EPB42P16452 691 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 278.7 ms