RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 BBS7Q8IWZ6 715 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 ANKRD13CQ8N6S4 541 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 MB21D1Q8N884 522 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 KLHL25Q9H0H3 589 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 SOX13Q9UN79 622 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 CLIC4Q9Y696 253 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 GCC2Q8IWJ2 1684 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 TEX14Q8IWB6 1497 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 SNTNA6NMZ2 147 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 ASNA1O43681 348 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 VCPP55072 806 aaKnown RBP12.24□□□□□ -0.45
PTCH1-209ENST00000437951 KLHL12Q53G59 568 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 CYGBQ8WWM9 190 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 CLEC4MQ9H2X3 399 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-209ENST00000437951 CDK13Q14004 1512 aaKnown RBP12.24□□□□□ -0.45
PTCH1-209ENST00000437951 CCNE1P24864 410 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 ZCWPW2Q504Y3 356 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 C11orf57Q6ZUT1 292 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-209ENST00000437951 GAS2L3Q86XJ1 694 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 KSR1Q8IVT5 923 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 AGBL1Q96MI9 1066 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 CCT8L2Q96SF2 557 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 PRAG1Q86YV5 1406 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 TRPM2O94759 1503 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 PRR23AA6NEV1 266 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 BFSP2Q13515 415 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 ODR4Q5SWX8 454 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 METTL23Q86XA0 190 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 PARD3BQ8TEW8 1205 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 DCAF5Q96JK2 942 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 APPL1Q9UKG1 709 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 ARL6IP4Q66PJ3 421 aaKnown RBP12.24□□□□□ -0.45
PTCH1-209ENST00000437951 CDH24Q86UP0 819 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 HPS5Q9UPZ3 1129 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 KIAA0232Q92628 1395 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 PALMO75781 387 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 TAP1Q03518 808 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 AARS2Q5JTZ9 985 aaKnown RBP12.24□□□□□ -0.45
PTCH1-209ENST00000437951 ARMC3Q5W041 872 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 PLA2G4DQ86XP0 818 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 CLEC4FQ8N1N0 589 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 TEKT4Q8WW24 435 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 DCTN4Q9UJW0 460 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 RCOR1Q9UKL0 485 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 PCDHA4Q9UN74 947 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 TCOF1Q13428 1488 aaKnown RBP12.24□□□□□ -0.45
PTCH1-209ENST00000437951 ZSCAN9O15535 394 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-209ENST00000437951 NAALADL2Q58DX5 795 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 ARHGAP22Q7Z5H3 698 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 ZNF532Q9HCE3 1301 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 CTDSPL2Q05D32 466 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 SFSWAPQ12872 951 aaKnown RBP12.24□□□□□ -0.45
PTCH1-209ENST00000437951 ITIH4Q14624 930 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 FAM192AQ9GZU8 254 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 AURKCQ9UQB9 309 aa12.24□□□□□ -0.45
PTCH1-209ENST00000437951 CFBP00751 764 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 ANXA13P27216 316 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 USH1GQ495M9 461 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 NDST4Q9H3R1 872 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 SELENONQ9NZV5 590 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 FAM32AQ9Y421 112 aaKnown RBP12.23□□□□□ -0.45
PTCH1-209ENST00000437951 IMPDH2P12268 514 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 ITGA6P23229 1130 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 ARMCX2Q7L311 632 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 JARID2Q92833 1246 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-209ENST00000437951 ZFYVE1Q9HBF4 777 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 KITP10721 976 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 EAPPQ56P03 285 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-209ENST00000437951 DLGAP2Q9P1A6 1054 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 TCP11X1B4DZS4 312 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 GFPT2O94808 682 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 KRT31Q15323 416 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 CSADQ9Y600 493 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 WDR17Q8IZU2 1322 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 H0YIN7 160 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 HNRNPDLO14979 420 aaKnown RBP12.23□□□□□ -0.45
PTCH1-209ENST00000437951 AKAP10O43572 662 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 TRAPPC3LQ5T215 181 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 MFN1Q8IWA4 741 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 SUPT20HQ8NEM7 779 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 PPP1R2P1Q96PQ5 205 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 SYTL2Q9HCH5 934 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 PCDHGB4Q9UN71 923 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 TNNQ9UQP3 1299 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 SRPRBQ9Y5M8 271 aaKnown RBP12.23□□□□□ -0.45
PTCH1-209ENST00000437951 PCDH11XQ9BZA7 1347 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 PCDH11YQ9BZA8 1340 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 ZFRQ96KR1 1074 aaKnown RBP12.23□□□□□ -0.45
PTCH1-209ENST00000437951 NACC1Q96RE7 527 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 PRMT1Q99873 361 aaKnown RBP12.23□□□□□ -0.45
PTCH1-209ENST00000437951 CD209Q9NNX6 404 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 UBE2TQ9NPD8 197 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-209ENST00000437951 ITM2BQ9Y287 266 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 TSPOAP1O95153 1857 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 ATP10DQ9P241 1426 aa12.23□□□□□ -0.45
PTCH1-209ENST00000437951 MAPKBP1O60336 1514 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 PDZK1P1A8MUH7 402 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 RIMBP2O15034 1052 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 PDE9AO76083 593 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 GPR162Q16538 588 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms