RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 HSP90AA4PQ58FG1 418 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 RNF220Q5VTB9 566 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 SNX30Q5VWJ9 437 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 NFRKBQ6P4R8 1299 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 PDXDC1Q6P996 788 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 CCDC62Q6P9F0 684 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 LRRC74BQ6ZQY2 392 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 TRMT10CQ7L0Y3 403 aaKnown RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 SH3RF1Q7Z6J0 888 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 PATL1Q86TB9 770 aaKnown RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 LRRC34Q8IZ02 419 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 ANKRD35Q8N283 1001 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 STAG2Q8N3U4 1231 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 SYT2Q8N9I0 419 aaPredicted RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 TERB1Q8NA31 727 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 SEC14L1Q92503 715 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 USP6NLQ92738 828 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 GATA6Q92908 595 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 SLC35B4Q969S0 331 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 EFHD2Q96C19 240 aaPredicted RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 PAGE5Q96GU1 130 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 TRIM47Q96LD4 638 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 MAGEB18Q96M61 343 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 SERPINB12Q96P63 405 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 HNRNPABQ99729 332 aaKnown RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 REPIN1Q9BWE0 567 aaKnown RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 YIPF2Q9BWQ6 316 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 NACA2Q9H009 215 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 DRC3Q9H069 523 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 ASCC2Q9H1I8 757 aaPredicted RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 CNNM2Q9H8M5 875 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 TMEM165Q9HC07 324 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 PALMDQ9NP74 551 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 UBN1Q9NPG3 1134 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 STRN4Q9NRL3 753 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 NMRK1Q9NWW6 199 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 RHBDL2Q9NX52 303 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 TAB2Q9NYJ8 693 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 SENP1Q9P0U3 644 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 DBF4Q9UBU7 674 aaPredicted RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 LRWD1Q9UFC0 647 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 SEC63Q9UGP8 760 aaKnown RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 HERC5Q9UII4 1024 aaKnown RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 FBXO2Q9UK22 296 aaPredicted RBP6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 FBXL5Q9UKA1 691 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 DMTF1Q9Y222 760 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 STARD13Q9Y3M8 1113 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 ATP6V0A2Q9Y487 856 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 MYO5BQ9ULV0 1848 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 COL15A1P39059 1388 aa6.03□□□□□ -1.44
VTI1BP4-201ENST00000427516 UTYO14607 1347 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 HTR3EA5X5Y0 456 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 RASGRF2O14827 1237 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 AREL1O15033 823 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZBTB43O43298 467 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 FKBP6O75344 327 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 DGAT1O75907 488 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 DEXIO95424 95 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 GGPS1O95749 300 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 MMP1P03956 469 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 LYNP07948 512 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 VAV1P15498 845 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZNF12P17014 697 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 CDC27P30260 824 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 STIP1P31948 543 aaKnown RBP6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 STX2P32856 288 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 HOXD12P35452 270 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 MTIF2P46199 727 aaKnown RBP6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 HSPA13P48723 471 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 MMP16P51512 607 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 INHBCP55103 352 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 NUP107P57740 925 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 TUBA1BP68363 451 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 AMPD3Q01432 767 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 GRIN1Q05586 938 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 MED21Q13503 144 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 RCN1Q15293 331 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 MTFR1Q15390 333 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 TBCCQ15814 346 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 TRMT5Q32P41 509 aaKnown RBP6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 Q3C1V9 767 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 SOGA3Q5TF21 947 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 MEI1Q5TIA1 1274 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 RWDD4Q6NW29 188 aaKnown RBP6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 TMEM53Q6P2H8 277 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 BORAQ6PGQ7 559 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 BARGINQ6ZT62 677 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 TUBA1AQ71U36 451 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 MCM10Q7L590 875 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 G2E3Q7L622 706 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 NANOGNBQ7Z5D8 188 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZNF589Q86UQ0 364 aaPredicted RBP6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 LONP2Q86WA8 852 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 CATSPER1Q8NEC5 780 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 SKA1Q96BD8 255 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 SNX27Q96L92 541 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 DHRS1Q96LJ7 313 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 LRGUKQ96M69 825 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 632.8 ms