RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 PPP1R9AQ9ULJ8 1098 aa7.24□□□□□ -1.25
NIF3L1-207ENST00000426253 SYNPO2Q9UMS6 1093 aa7.24□□□□□ -1.25
NIF3L1-207ENST00000426253 STX8Q9UNK0 236 aa7.24□□□□□ -1.25
NIF3L1-207ENST00000426253 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.24□□□□□ -1.25
NIF3L1-207ENST00000426253 PCDHB5Q9Y5E4 795 aa7.24□□□□□ -1.25
NIF3L1-207ENST00000426253 SLC4A7Q9Y6M7 1214 aa7.24□□□□□ -1.25
NIF3L1-207ENST00000426253 MYH7P12883 1935 aa7.24□□□□□ -1.25
NIF3L1-207ENST00000426253 CCDC171Q6TFL3 1326 aa7.24□□□□□ -1.25
NIF3L1-207ENST00000426253 COL4A4P53420 1690 aaPredicted RBP7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 FAM221AA4D161 298 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 TMEM232C9JQI7 657 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 LINC01387J3KSC0 135 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 FSCN2O14926 492 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 ORC4O43929 436 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 NMT2O60551 498 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 COBLO75128 1261 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 CYP11A1P05108 521 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 HOXC6P09630 235 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 FCER1AP12319 257 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 BMP3P12645 472 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 MCCP23508 829 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 ADORA2AP29274 412 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 GTF2F1P35269 517 aaKnown RBP eCLIP7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 SOX9P48436 509 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 HAND2P61296 217 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 GRB10Q13322 594 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 GRB14Q14449 540 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 TMEM67Q5HYA8 995 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 RCSD1Q6JBY9 416 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 BMP8AQ7Z5Y6 402 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 PDZD3Q86UT5 571 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 CPXCR1Q8N123 301 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 LRRC47Q8N1G4 583 aaKnown RBP7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 KLHL23Q8NBE8 558 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 GMCL1P1Q8NEA9 526 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 STK35Q8TDR2 534 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 CHURC1Q8WUH1 139 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 NKD1Q969G9 470 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 CHAMP1Q96JM3 812 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 IL23AQ9NPF7 189 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 TCP11L1Q9NUJ3 509 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 CACNA2D2Q9NY47 1150 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 ISY1Q9ULR0 285 aaKnown RBP7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 MYO15AQ9UKN7 3530 aa7.23□□□□□ -1.25
NIF3L1-207ENST00000426253 A0A1W2PQ45 241 aaPredicted RBP7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 A0A1W2PQY0 241 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 PGK2P07205 417 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 GSTP1P09211 210 aaKnown RBP7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 PCP11498 1178 aaKnown RBP7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 CYBAP13498 195 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 ATP2A2P16615 1042 aaKnown RBP7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 COPB2P35606 906 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 SLC1A4P43007 532 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 GSTM4Q03013 218 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 ZP2Q05996 745 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 APOBRQ0VD83 1088 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 IKQ13123 557 aaPredicted RBP7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 MPP2Q14168 576 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 PRAMEF19Q5SWL8 479 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 TTC22Q5TAA0 569 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 BNC2Q6ZN30 1099 aaPredicted RBP7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 MAP4K3Q8IVH8 894 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 ABRAQ8N0Z2 381 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 FBXL6Q8N531 539 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 REPS2Q8NFH8 660 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 GRIN3AQ8TCU5 1115 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 STAG1Q8WVM7 1258 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 DHX38Q92620 1227 aaKnown RBP7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 EDAQ92838 391 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 NKD2Q969F2 451 aaPredicted RBP7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 TTC14Q96N46 770 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 MMP19Q99542 508 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 RNF41Q9H4P4 317 aaPredicted RBP7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 CBX8Q9HC52 389 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 RAVER2Q9HCJ3 691 aaKnown RBP7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 UBP1Q9NZI7 540 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 CTNNA3Q9UI47 895 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 TBX21Q9UL17 535 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 ZNF214Q9UL59 606 aaPredicted RBP7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 STRIP2Q9ULQ0 834 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 FAM50BQ9Y247 325 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 EFR3BQ9Y2G0 817 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 RIPK3Q9Y572 518 aa7.22□□□□□ -1.25
NIF3L1-207ENST00000426253 CHD6Q8TD26 2715 aa7.21□□□□□ -1.25
NIF3L1-207ENST00000426253 TRANK1O15050 2925 aa7.21□□□□□ -1.25
NIF3L1-207ENST00000426253 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.21□□□□□ -1.26
NIF3L1-207ENST00000426253 SHISA8B8ZZ34 492 aa7.21□□□□□ -1.26
NIF3L1-207ENST00000426253 H3BQ06 376 aaPredicted RBP7.21□□□□□ -1.26
NIF3L1-207ENST00000426253 ATP2A1O14983 1001 aa7.21□□□□□ -1.26
NIF3L1-207ENST00000426253 SEPT4O43236 478 aa7.21□□□□□ -1.26
NIF3L1-207ENST00000426253 CILPO75339 1184 aa7.21□□□□□ -1.26
NIF3L1-207ENST00000426253 F13A1P00488 732 aa7.21□□□□□ -1.26
NIF3L1-207ENST00000426253 CELA2BP08218 269 aaPredicted RBP7.21□□□□□ -1.26
NIF3L1-207ENST00000426253 TOP1P11387 765 aaKnown RBP7.21□□□□□ -1.26
NIF3L1-207ENST00000426253 GSPT1P15170 499 aaKnown RBP7.21□□□□□ -1.26
NIF3L1-207ENST00000426253 CDC25BP30305 580 aa7.21□□□□□ -1.26
NIF3L1-207ENST00000426253 NOVP48745 357 aa7.21□□□□□ -1.26
NIF3L1-207ENST00000426253 STAT2P52630 851 aa7.21□□□□□ -1.26
NIF3L1-207ENST00000426253 VCPP55072 806 aaKnown RBP7.21□□□□□ -1.26
NIF3L1-207ENST00000426253 COL9A3Q14050 684 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms