RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 EEF2KMTQ96G04 330 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 EPSTI1Q96J88 318 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 TRIM47Q96LD4 638 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 CATSPER2Q96P56 530 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 TIPINQ9BVW5 301 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 DHX36Q9H2U1 1008 aaKnown RBP8.43□□□□□ -1.06
SIK3-203ENST00000415541 EXOC1Q9NV70 894 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 CYP39A1Q9NYL5 469 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 ZBTB21Q9ULJ3 1066 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 NUP188Q5SRE5 1749 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 HOXA10P31260 410 aaPredicted RBP8.43□□□□□ -1.06
SIK3-203ENST00000415541 VHLP40337 213 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 SKIV2L2P42285 1042 aaKnown RBP8.43□□□□□ -1.06
SIK3-203ENST00000415541 AMPD3Q01432 767 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 BNIP1Q12981 228 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 UBE2SQ16763 222 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 SBK1Q52WX2 424 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 ARL10Q8N8L6 244 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 NEDD1Q8NHV4 660 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 SYMPKQ92797 1274 aaKnown RBP8.43□□□□□ -1.06
SIK3-203ENST00000415541 MAML3Q96JK9 1138 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 PYM1Q9BRP8 204 aaKnown RBP8.43□□□□□ -1.06
SIK3-203ENST00000415541 TUBA8Q9NY65 449 aaPredicted RBP8.43□□□□□ -1.06
SIK3-203ENST00000415541 KLHL14Q9P2G3 628 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 ARL2BPQ9Y2Y0 163 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 PKD1L3Q7Z443 1732 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 LAMB4A4D0S4 1761 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 FOXP2O15409 715 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 ONECUT3O60422 494 aaPredicted RBP8.42□□□□□ -1.06
SIK3-203ENST00000415541 COBLO75128 1261 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 MOCS3O95396 460 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 CHN1P15882 459 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 PTPREP23469 700 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 TNIP1Q15025 636 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 TTBK2Q6IQ55 1244 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 GALNT17Q6IS24 598 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 KLC3Q6P597 504 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 NSMFQ6X4W1 530 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 INTS8Q75QN2 995 aaKnown RBP8.42□□□□□ -1.06
SIK3-203ENST00000415541 TAOK1Q7L7X3 1001 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 NME8Q8N427 588 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 CFAP61Q8NHU2 1237 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 CLMNQ96JQ2 1002 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 DDX23Q9BUQ8 820 aaKnown RBP8.42□□□□□ -1.06
SIK3-203ENST00000415541 RTFDC1Q9BY42 306 aaPredicted RBP8.42□□□□□ -1.06
SIK3-203ENST00000415541 SH2D4AQ9H788 454 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 AGAP1Q9UPQ3 857 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 NWD2Q9ULI1 1742 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 EEF2P13639 858 aaKnown RBP8.42□□□□□ -1.06
SIK3-203ENST00000415541 UBXN2AP68543 259 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 MCL1Q07820 350 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 TROAPQ12815 778 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 CALCRLQ16602 461 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 OLFML1Q6UWY5 402 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 DYMQ7RTS9 669 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 ZNF554Q86TJ5 538 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 CCDC84Q86UT8 332 aaPredicted RBP8.42□□□□□ -1.06
SIK3-203ENST00000415541 ABTB1Q969K4 478 aaPredicted RBP8.42□□□□□ -1.06
SIK3-203ENST00000415541 GFM2Q969S9 779 aaKnown RBP8.42□□□□□ -1.06
SIK3-203ENST00000415541 FERMT2Q96AC1 680 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 PBKQ96KB5 322 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 AGAP3Q96P47 875 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 NAP1L3Q99457 506 aaPredicted RBP8.42□□□□□ -1.06
SIK3-203ENST00000415541 ETNK1Q9HBU6 452 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 FAM114A2Q9NRY5 505 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 ABCF3Q9NUQ8 709 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 IL1RAPL1Q9NZN1 696 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 CNOT8Q9UFF9 292 aaKnown RBP8.42□□□□□ -1.06
SIK3-203ENST00000415541 PCDHA13Q9Y5I0 950 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 USH1CQ9Y6N9 552 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 DDX60Q8IY21 1712 aaKnown RBP8.42□□□□□ -1.06
SIK3-203ENST00000415541 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.42□□□□□ -1.06
SIK3-203ENST00000415541 GNAZP19086 355 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 MAGEA1P43355 309 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 MTIF2P46199 727 aaKnown RBP8.42□□□□□ -1.06
SIK3-203ENST00000415541 PPP4CP60510 307 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 USP46P62068 366 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 SF3A3Q12874 501 aaKnown RBP eCLIP8.42□□□□□ -1.063e-7■■■■□ 23.5
SIK3-203ENST00000415541 MEA1Q16626 185 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 WASHC2DQ5SRD0 308 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 VSIG1Q86XK7 387 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 FBXL16Q8N461 479 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 ATP11CQ8NB49 1132 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 OR2W6PQ8NHA6 318 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.42□□□□□ -1.06
SIK3-203ENST00000415541 LRRC8CQ8TDW0 803 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 SH3TC2Q8TF17 1288 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 PPP2R3CQ969Q6 453 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 MAP3K14Q99558 947 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 BARX2Q9UMQ3 279 aaPredicted RBP8.42□□□□□ -1.06
SIK3-203ENST00000415541 PCDHA4Q9UN74 947 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 TFR2Q9UP52 801 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 CHMP2BQ9UQN3 213 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 PCDHAC2Q9Y5I4 1007 aa8.42□□□□□ -1.06
SIK3-203ENST00000415541 AHDC1Q5TGY3 1603 aaPredicted RBP8.42□□□□□ -1.06
SIK3-203ENST00000415541 LGALS16A8MUM7 142 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 RGS16O15492 202 aaPredicted RBP8.41□□□□□ -1.06
SIK3-203ENST00000415541 CYP11B2P19099 503 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 EEF1GP26641 437 aaKnown RBP8.41□□□□□ -1.06
SIK3-203ENST00000415541 CASP1P29466 404 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms