RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 NPEPPSP55786 919 aa13.98□□□□□ -0.17
NCKIPSD-203ENST00000415281 PLA2G4FQ68DD2 849 aa13.98□□□□□ -0.17
NCKIPSD-203ENST00000415281 TMEM173Q86WV6 379 aaPredicted RBP13.98□□□□□ -0.17
NCKIPSD-203ENST00000415281 TRIM22Q8IYM9 498 aa13.98□□□□□ -0.17
NCKIPSD-203ENST00000415281 SLC39A11Q8N1S5 342 aa13.98□□□□□ -0.17
NCKIPSD-203ENST00000415281 HELQQ8TDG4 1101 aa13.98□□□□□ -0.17
NCKIPSD-203ENST00000415281 BCL7CQ8WUZ0 217 aaPredicted RBP13.98□□□□□ -0.17
NCKIPSD-203ENST00000415281 IFT122Q9HBG6 1241 aa13.98□□□□□ -0.17
NCKIPSD-203ENST00000415281 CDH22Q9UJ99 828 aa13.98□□□□□ -0.17
NCKIPSD-203ENST00000415281 LZTS1Q9Y250 596 aa13.98□□□□□ -0.17
NCKIPSD-203ENST00000415281 DDX11L8A8MPP1 907 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 NT5C1B-RDH14C9J2C7 533 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 WNT7AO00755 349 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 EOMESO95936 686 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 LAG3P18627 525 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 TMOD1P28289 359 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 PHKA2P46019 1235 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 AFF1P51825 1210 aaKnown RBP13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 TBC1D8BQ0IIM8 1120 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 PPP2R5CQ13362 524 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 NONOQ15233 471 aaKnown RBP eCLIP13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 SPOUT1Q5T280 376 aaKnown RBP13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 PPP4R3AQ6IN85 833 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 GALNT17Q6IS24 598 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 HFE2Q6ZVN8 426 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 THNSL1Q8IYQ7 743 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 LPPQ93052 612 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 MAP7D2Q96T17 732 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 VN1R3Q9BXE9 311 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 MINDY3Q9H8M7 445 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 SEPT9Q9UHD8 586 aaPredicted RBP13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 DDX25Q9UHL0 483 aaKnown RBP13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 FAM50BQ9Y247 325 aa13.97□□□□□ -0.17
NCKIPSD-203ENST00000415281 MUC6Q6W4X9 2439 aa13.96□□□□□ -0.17
NCKIPSD-203ENST00000415281 STK36Q9NRP7 1315 aa13.96□□□□□ -0.17
NCKIPSD-203ENST00000415281 USP34Q70CQ2 3546 aa13.96□□□□□ -0.17
NCKIPSD-203ENST00000415281 ZSCAN20P17040 1043 aaPredicted RBP13.96□□□□□ -0.17
NCKIPSD-203ENST00000415281 HOXA11P31270 313 aaPredicted RBP13.96□□□□□ -0.17
NCKIPSD-203ENST00000415281 ST3GAL1Q11201 340 aa13.96□□□□□ -0.17
NCKIPSD-203ENST00000415281 LETM2Q2VYF4 491 aa13.96□□□□□ -0.17
NCKIPSD-203ENST00000415281 UBXN11Q5T124 520 aa13.96□□□□□ -0.17
NCKIPSD-203ENST00000415281 PLPP4Q5VZY2 271 aa13.96□□□□□ -0.17
NCKIPSD-203ENST00000415281 FAM177A1Q8N128 213 aaPredicted RBP13.96□□□□□ -0.17
NCKIPSD-203ENST00000415281 ZNF710Q8N1W2 664 aa13.96□□□□□ -0.17
NCKIPSD-203ENST00000415281 MICAL1Q8TDZ2 1067 aa13.96□□□□□ -0.17
NCKIPSD-203ENST00000415281 C22orf23Q9BZE7 217 aa13.96□□□□□ -0.17
NCKIPSD-203ENST00000415281 DHX33Q9H6R0 707 aaKnown RBP13.96□□□□□ -0.17
NCKIPSD-203ENST00000415281 AAASQ9NRG9 546 aa13.96□□□□□ -0.17
NCKIPSD-203ENST00000415281 SUCLA2Q9P2R7 463 aaPredicted RBP13.96□□□□□ -0.17
NCKIPSD-203ENST00000415281 CPLX1O14810 134 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 ZNF623O75123 536 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 OFD1O75665 1012 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 AK2P54819 239 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 BCAR1P56945 870 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 ANAPC15P60006 121 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 PSMC5P62195 406 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 NR5A1Q13285 461 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 ME3Q16798 604 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 LONRF3Q496Y0 759 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 PDE12Q6L8Q7 609 aaKnown RBP13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 ANKRD54Q6NXT1 300 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 KRT25Q7Z3Z0 450 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 RHPN2Q8IUC4 686 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 MRPL43Q8N983 215 aaKnown RBP13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 NECAB1Q8N987 351 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 RNF169Q8NCN4 708 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 NLRP7Q8WX94 980 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 EDAQ92838 391 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 ZNF558Q96NG5 402 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 TCF25Q9BQ70 676 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 GCOM2Q9BZD3 368 aaPredicted RBP13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 NRDE2Q9H7Z3 1164 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 CYP26B1Q9NR63 512 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 CHST12Q9NRB3 414 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 RNF216Q9NWF9 866 aaPredicted RBP13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 SPG21Q9NZD8 308 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 RGL1Q9NZL6 768 aa13.95□□□□□ -0.18
NCKIPSD-203ENST00000415281 C2orf71A6NGG8 1288 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 SLITRK3O94933 977 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 DMDP11532 3685 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 QARSP47897 775 aaKnown RBP13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 CSPP1Q1MSJ5 1256 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 KANK3Q6NY19 840 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 AGMOQ6ZNB7 445 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 PIK3AP1Q6ZUJ8 805 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 MRPL10Q7Z7H8 261 aaKnown RBP13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 NEK8Q86SG6 692 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 ZNF280BQ86YH2 543 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 POTEDQ86YR6 584 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 KMT2EQ8IZD2 1858 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 LRRC43Q8N309 656 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 PRPF31Q8WWY3 499 aaKnown RBP13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 FAM20AQ96MK3 541 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 CDCA3Q99618 268 aaPredicted RBP13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 PHF7Q9BWX1 381 aaPredicted RBP13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 DNAJB4Q9UDY4 337 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 TCEAL9Q9UHQ7 104 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 HCN4Q9Y3Q4 1203 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 MYO10Q9HD67 2058 aa13.94□□□□□ -0.18
NCKIPSD-203ENST00000415281 HOXA2O43364 376 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms