RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ST3GAL5Q9UNP4 418 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 NOC2LQ9Y3T9 749 aaKnown RBP10.75□□□□□ -0.69
NEDD9-203ENST00000397378 NFASCO94856 1347 aa10.75□□□□□ -0.69
NEDD9-203ENST00000397378 COL4A3Q01955 1670 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 GPR182O15218 404 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 KIF5BP33176 963 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 ALDH7A1P49419 539 aaKnown RBP10.74□□□□□ -0.69
NEDD9-203ENST00000397378 GNAQP50148 359 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 SLC26A2P50443 739 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 STAT5BP51692 787 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 STARD6P59095 220 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 AAMPQ13685 434 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 UNQ6494/PRO21346Q6UXR6 183 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 PRR23CQ6ZRP0 262 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 RALYLQ86SE5 291 aaKnown RBP10.74□□□□□ -0.69
NEDD9-203ENST00000397378 RNF169Q8NCN4 708 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 NCOA7Q8NI08 942 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 CTCFLQ8NI51 663 aaPredicted RBP10.74□□□□□ -0.69
NEDD9-203ENST00000397378 IGDCC4Q8TDY8 1250 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 TMEM40Q8WWA1 233 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 MYADMQ96S97 322 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 LZTS2Q9BRK4 669 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 PKD2L1Q9P0L9 805 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 EPS15L1Q9UBC2 864 aa10.74□□□□□ -0.69
NEDD9-203ENST00000397378 KANSL1LA0AUZ9 987 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 SPDYE3A6NKU9 549 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 E7EWF7 191 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 HBP1O60381 514 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 GDF9O60383 454 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 DDAH1O94760 285 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 ATG7O95352 703 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 ZIC2O95409 532 aaPredicted RBP10.73□□□□□ -0.69
NEDD9-203ENST00000397378 CTSAP10619 480 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 KLRC1P26715 233 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 KLRC2P26717 231 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 BCAR1P56945 870 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 ACTR2P61160 394 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 NUCB1Q02818 461 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 SNW1Q13573 536 aaKnown RBP10.73□□□□□ -0.69
NEDD9-203ENST00000397378 LAIR1Q6GTX8 287 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 B4GALNT3Q6L9W6 998 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 PRR23BQ6ZRT6 265 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 KIAA0319LQ8IZA0 1049 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 ZNF654Q8IZM8 581 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 ST13P5Q8NFI4 369 aaPredicted RBP10.73□□□□□ -0.69
NEDD9-203ENST00000397378 PPP1R16BQ96T49 567 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 MXRA8Q9BRK3 442 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 SDF4Q9BRK5 362 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 MTA3Q9BTC8 594 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 CDHR5Q9HBB8 845 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 SLC2A4RGQ9NR83 387 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 KCNH7Q9NS40 1196 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 SEMA4GQ9NTN9 838 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 RNF19AQ9NV58 838 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 PCDHA6Q9UN73 950 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 PCDHA8Q9Y5H6 950 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 CLUHO75153 1309 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 COL1A2P08123 1366 aa10.73□□□□□ -0.69
NEDD9-203ENST00000397378 RALGAPA1Q6GYQ0 2036 aa10.72□□□□□ -0.69
NEDD9-203ENST00000397378 IGKV6D-21A0A0A0MT36 114 aa10.72□□□□□ -0.69
NEDD9-203ENST00000397378 FAM170BA6NMN3 283 aa10.72□□□□□ -0.69
NEDD9-203ENST00000397378 LRP3O75074 770 aa10.72□□□□□ -0.69
NEDD9-203ENST00000397378 CRYBB1P53674 252 aaPredicted RBP10.72□□□□□ -0.69
NEDD9-203ENST00000397378 ANTXR2P58335 489 aa10.72□□□□□ -0.69
NEDD9-203ENST00000397378 DSC3Q14574 896 aa10.72□□□□□ -0.69
NEDD9-203ENST00000397378 UBE2SQ16763 222 aa10.72□□□□□ -0.69
NEDD9-203ENST00000397378 LRSAM1Q6UWE0 723 aa10.72□□□□□ -0.69
NEDD9-203ENST00000397378 TEX2Q8IWB9 1127 aa10.72□□□□□ -0.69
NEDD9-203ENST00000397378 MB21D2Q8IYB1 491 aaPredicted RBP10.72□□□□□ -0.69
NEDD9-203ENST00000397378 SRBD1Q8N5C6 995 aaKnown RBP10.72□□□□□ -0.69
NEDD9-203ENST00000397378 BBXQ8WY36 941 aaPredicted RBP10.72□□□□□ -0.69
NEDD9-203ENST00000397378 NELL1Q92832 810 aa10.72□□□□□ -0.69
NEDD9-203ENST00000397378 MYL10Q9BUA6 226 aa10.72□□□□□ -0.69
NEDD9-203ENST00000397378 EMILIN2Q9BXX0 1053 aa10.72□□□□□ -0.69
NEDD9-203ENST00000397378 RWDD1Q9H446 243 aaPredicted RBP10.72□□□□□ -0.69
NEDD9-203ENST00000397378 WDR6Q9NNW5 1121 aaKnown RBP10.72□□□□□ -0.69
NEDD9-203ENST00000397378 LHX6Q9UPM6 363 aa10.72□□□□□ -0.69
NEDD9-203ENST00000397378 MTF2Q9Y483 593 aaPredicted RBP10.72□□□□□ -0.69
NEDD9-203ENST00000397378 IRAK3Q9Y616 596 aa10.72□□□□□ -0.69
NEDD9-203ENST00000397378 NUMBLQ9Y6R0 609 aa10.72□□□□□ -0.69
NEDD9-203ENST00000397378 MYH15Q9Y2K3 1946 aa10.72□□□□□ -0.69
NEDD9-203ENST00000397378 SETXQ7Z333 2677 aaKnown RBP10.71□□□□□ -0.69
NEDD9-203ENST00000397378 CCDC195A0A1B0GUA6 201 aa10.71□□□□□ -0.69
NEDD9-203ENST00000397378 ZC3H11AO75152 810 aaKnown RBP eCLIP10.71□□□□□ -0.69
NEDD9-203ENST00000397378 PLEKHA8P1O95397 391 aa10.71□□□□□ -0.69
NEDD9-203ENST00000397378 RETP07949 1114 aa10.71□□□□□ -0.69
NEDD9-203ENST00000397378 MAGEA9P43362 315 aa10.71□□□□□ -0.69
NEDD9-203ENST00000397378 CLCN4P51793 760 aa10.71□□□□□ -0.69
NEDD9-203ENST00000397378 POLGP54098 1239 aaPredicted RBP10.71□□□□□ -0.69
NEDD9-203ENST00000397378 PTH1RQ03431 593 aa10.71□□□□□ -0.69
NEDD9-203ENST00000397378 ZNF484Q5JVG2 852 aa10.71□□□□□ -0.69
NEDD9-203ENST00000397378 ZFYVE26Q68DK2 2539 aa10.71□□□□□ -0.69
NEDD9-203ENST00000397378 GET4Q7L5D6 327 aaPredicted RBP10.71□□□□□ -0.69
NEDD9-203ENST00000397378 FAM228AQ86W67 206 aa10.71□□□□□ -0.69
NEDD9-203ENST00000397378 TMEM173Q86WV6 379 aaPredicted RBP10.71□□□□□ -0.69
NEDD9-203ENST00000397378 DOCK8Q8NF50 2099 aa10.71□□□□□ -0.69
NEDD9-203ENST00000397378 HELQQ8TDG4 1101 aa10.71□□□□□ -0.69
NEDD9-203ENST00000397378 OSMRQ99650 979 aa10.71□□□□□ -0.69
NEDD9-203ENST00000397378 LY9Q9HBG7 655 aa10.71□□□□□ -0.69
NEDD9-203ENST00000397378 MAN1C1Q9NR34 630 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms