RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 NR3C2P08235 984 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 TCP1P17987 556 aaKnown RBP11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 YWHABP31946 246 aaKnown RBP11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 CASP4P49662 377 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 HMGCS2P54868 508 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 BAATQ14032 418 aaPredicted RBP11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 ZC2HC1CQ53FD0 456 aaPredicted RBP11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 PRAMEF18Q5VWM3 479 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 VPS36Q86VN1 386 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 SYCP3Q8IZU3 236 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 DAW1Q8N136 415 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 HNRNPLLQ8WVV9 542 aaKnown RBP11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 ZKSCAN4Q969J2 545 aaPredicted RBP11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 INPP4AQ96PE3 977 aaPredicted RBP11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 NOX5Q96PH1 765 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 PARD6BQ9BYG5 372 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 ARFGAP3Q9NP61 516 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 HOXC10Q9NYD6 342 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 PKD2L1Q9P0L9 805 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 GCNT4Q9P109 453 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 ZNF214Q9UL59 606 aaPredicted RBP11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 SSC5DA1L4H1 1573 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 WDR81Q562E7 1941 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 TESPA1A2RU30 521 aaPredicted RBP11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 P4HA2O15460 535 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 CCDC172P0C7W6 258 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 KRT13P13646 458 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 FERP16591 822 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 ZSCAN20P17040 1043 aaPredicted RBP11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 SLC9A1P19634 815 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 ABCD1P33897 745 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 GTF2BQ00403 316 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 ITIH3Q06033 890 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 GFPT1Q06210 699 aaPredicted RBP11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 KCNA1Q09470 495 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 CC2D1AQ6P1N0 951 aaPredicted RBP11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 INTS8Q75QN2 995 aaKnown RBP11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 OTUD6AQ7L8S5 288 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 SULF1Q8IWU6 871 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 FAM133AQ8N9E0 248 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 ATP6V0A1Q93050 837 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 MOV10L1Q9BXT6 1211 aaKnown RBP11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 C17orf75Q9HAS0 396 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 SIX2Q9NPC8 291 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 ZNF446Q9NWS9 450 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 SNX12Q9UMY4 172 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 EXOC7Q9UPT5 735 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 HYOU1Q9Y4L1 999 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 AFG3L2Q9Y4W6 797 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 PCDHA10Q9Y5I2 948 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 A0A0G2JMZ2 1700 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 PAPPA2Q9BXP8 1791 aa11.43□□□□□ -0.58
POLR2J3-201ENST00000379340 ARID2Q68CP9 1835 aa11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 GPR25O00155 361 aa11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 FMO5P49326 533 aa11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 NCKAP1LP55160 1127 aa11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 JAM2P57087 298 aa11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 BFSP1Q12934 665 aa11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 MKRN3Q13064 507 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 PKN2Q16513 984 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 IFI16Q16666 785 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 GNPTABQ3T906 1256 aa11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 FBXO46Q6PJ61 603 aaPredicted RBP11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 ZNF572Q7Z3I7 529 aaPredicted RBP11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 CHST13Q8NET6 341 aa11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 RUBCNQ92622 972 aa11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 ANKZF1Q9H8Y5 726 aa11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 RNF14Q9UBS8 474 aa11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 KCNG1Q9UIX4 513 aa11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 TFR2Q9UP52 801 aa11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 RIPK3Q9Y572 518 aa11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 FHOD1Q9Y613 1164 aa11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 KIAA1217Q5T5P2 1943 aa11.42□□□□□ -0.58
POLR2J3-201ENST00000379340 TARSL2A2RTX5 802 aaKnown RBP11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 ENC1O14682 589 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 EXOC3O60645 756 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 MOCS3O95396 460 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 PSAPP07602 524 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 STAT1P42224 750 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 CYP2J2P51589 502 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 SMTNP53814 917 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 MCCD1P59942 119 aaPredicted RBP11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 CETN1Q12798 172 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 TMEM132BQ14DG7 1078 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 NAB2Q15742 525 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 XKR9Q5GH70 373 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 CCDC70Q6NSX1 233 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 WDR93Q6P2C0 686 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 IRF2BP2Q7Z5L9 587 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 DNERQ8NFT8 737 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 CAGE1Q8TC20 777 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 KIFAP3Q92845 792 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 ARID3AQ99856 593 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 BCAS3Q9H6U6 928 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 MLXIPQ9HAP2 919 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 POLD4Q9HCU8 107 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 FBXO40Q9UH90 709 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 INTUQ9ULD6 942 aa11.41□□□□□ -0.58
POLR2J3-201ENST00000379340 CAPN6Q9Y6Q1 641 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms