RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 PDCD2Q16342 344 aaPredicted RBP15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 ALKBH2Q6NS38 261 aa15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 ALKBH5Q6P6C2 394 aaKnown RBP15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 RASSF3Q86WH2 238 aa15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 CDHR1Q96JP9 859 aa15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 THAP9Q9H5L6 903 aa15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 GABBR1Q9UBS5 961 aa15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 GCFC2P16383 781 aaKnown RBP15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 CENPUQ71F23 418 aa15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 TAS2R42Q7RTR8 314 aa15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 EPC1Q9H2F5 836 aa15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 E2F6O75461 281 aa15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 HMBSP08397 361 aa15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 PCP11498 1178 aaKnown RBP15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 RABGGTAQ92696 567 aa15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 ATP6V0A4Q9HBG4 840 aa15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 NDFIP2Q9NV92 336 aa15.72■□□□□ 0.11
NOTCH4-201ENST00000375023 SPP2Q13103 211 aa15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 ATP11BQ9Y2G3 1177 aa15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 PLXNC1O60486 1568 aa15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 CEP95Q96GE4 821 aa15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 HACL1Q9UJ83 578 aa15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 BLMP54132 1417 aaPredicted RBP15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 PALLDQ8WX93 1383 aa15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 UBE4BO95155 1302 aa15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 KRT10P13645 584 aa15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 CCNE1P24864 410 aa15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 LRRC14Q15048 493 aa15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 STXBP2Q15833 593 aa15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 TDRD7Q8NHU6 1098 aaKnown RBP15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 ARHGEF1Q92888 912 aaKnown RBP15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 E5RI56 91 aa15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 SLC8A1P32418 973 aa15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 RWDD2BP57060 319 aa15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 PADI6Q6TGC4 694 aa15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 TRPV6Q9H1D0 765 aa15.71■□□□□ 0.11
NOTCH4-201ENST00000375023 ESYT3A0FGR9 886 aa15.71■□□□□ 0.1
NOTCH4-201ENST00000375023 PRPF4O43172 522 aaKnown RBP eCLIP15.71■□□□□ 0.1
NOTCH4-201ENST00000375023 SYF2O95926 243 aaKnown RBP15.71■□□□□ 0.1
NOTCH4-201ENST00000375023 CHEK2O96017 543 aa15.71■□□□□ 0.1
NOTCH4-201ENST00000375023 DAB2P98082 770 aa15.71■□□□□ 0.1
NOTCH4-201ENST00000375023 RESTQ13127 1097 aa15.71■□□□□ 0.1
NOTCH4-201ENST00000375023 TTLL11Q8NHH1 800 aa15.71■□□□□ 0.1
NOTCH4-201ENST00000375023 PBKQ96KB5 322 aa15.71■□□□□ 0.1
NOTCH4-201ENST00000375023 HPCAL4Q9UM19 191 aa15.71■□□□□ 0.1
NOTCH4-201ENST00000375023 SPATA33Q96N06 139 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 ZNF302Q9NR11 478 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 ABCC2Q92887 1545 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 HUS1O60921 280 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 SETSIPP0DME0 302 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 NR1D1P20393 614 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 GPSM2P81274 684 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 E2F4Q16254 413 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 EPHA10Q5JZY3 1008 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 HPS3Q969F9 1004 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 MASTLQ96GX5 879 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 EGFL8Q99944 293 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 CAPN10Q9HC96 672 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 FAM135BQ49AJ0 1406 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 CIITAP33076 1130 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 FOXR1Q6PIV2 292 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 RGS9BPQ6ZS82 235 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 GOLPH3LQ9H4A5 285 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 LRRC53A6NM62 1247 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 CCDC85BQ15834 202 aaPredicted RBP15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 MAPK6Q16659 721 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 SH3KBP1Q96B97 665 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 NUP85Q9BW27 656 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 KIF24Q5T7B8 1368 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 CDC25BP30305 580 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 PRCPP42785 496 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 PRELPP51888 382 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 RC3H1Q5TC82 1133 aaKnown RBP15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 VSTM4Q8IW00 320 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 NEK9Q8TD19 979 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 HDAC6Q9UBN7 1215 aa15.7■□□□□ 0.1
NOTCH4-201ENST00000375023 IQANK1A0A1B0GTG1 560 aa15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 COPEO14579 308 aa15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 ZSCAN9O15535 394 aaPredicted RBP15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 TJP3O95049 919 aa15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 CYP2E1P05181 493 aaPredicted RBP15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 CCDC90BQ9GZT6 254 aa15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 CYP4F11Q9HBI6 524 aa15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 ATXN3P54252 364 aaPredicted RBP15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 ARHGEF25Q86VW2 580 aa15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 TMEM47Q9BQJ4 181 aa15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 POLR3CQ9BUI4 534 aaPredicted RBP15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 POLR3FQ9H1D9 316 aaPredicted RBP15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 HLA-DPA1P20036 260 aa15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 CLCN6P51797 869 aa15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 TAF1BQ53T94 588 aaPredicted RBP15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 HIBCHQ6NVY1 386 aaPredicted RBP15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 PDIK1LQ8N165 341 aa15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 FBXO41Q8TF61 875 aa15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 CELF1Q92879 486 aaKnown RBP15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 NNMTP40261 264 aa15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 KIAA1755Q5JYT7 1200 aa15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 FAM160B2Q86V87 743 aa15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 ZC3H18Q86VM9 953 aaKnown RBP15.69■□□□□ 0.1
NOTCH4-201ENST00000375023 CRLF3Q8IUI8 442 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms