RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 IRX5P78411 483 aaPredicted RBP16.14■□□□□ 0.17
CBX3-201ENST00000337620 DRP2Q13474 957 aa16.14■□□□□ 0.17
CBX3-201ENST00000337620 HS1BP3Q53T59 392 aa16.14■□□□□ 0.17
CBX3-201ENST00000337620 ZC3H3Q8IXZ2 948 aaKnown RBP16.14■□□□□ 0.17
CBX3-201ENST00000337620 LRRC71Q8N4P6 559 aa16.14■□□□□ 0.17
CBX3-201ENST00000337620 TRPV1Q8NER1 839 aa16.14■□□□□ 0.17
CBX3-201ENST00000337620 IMPACTQ9P2X3 320 aa16.14■□□□□ 0.17
CBX3-201ENST00000337620 TBX20Q9UMR3 447 aa16.14■□□□□ 0.17
CBX3-201ENST00000337620 GNA14O95837 355 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 HOXD8P13378 290 aaPredicted RBP16.13■□□□□ 0.17
CBX3-201ENST00000337620 AKR1A1P14550 325 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 GLRA2P23416 452 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 CNGA1P29973 690 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 ZNF484Q5JVG2 852 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 CEP135Q66GS9 1140 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 SPECC1LQ69YQ0 1117 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 GOLGA5Q8TBA6 731 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 ZBTB10Q96DT7 871 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 JPH2Q9BR39 696 aaPredicted RBP16.13■□□□□ 0.17
CBX3-201ENST00000337620 AGPAT3Q9NRZ7 376 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 KCNG1Q9UIX4 513 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 ADGRA3Q8IWK6 1321 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 LRRIQ4A6NIV6 560 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 LGALS16A8MUM7 142 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 GPR25O00155 361 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 HOXD10P28358 340 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 TRIM32Q13049 653 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 PPP2R5AQ15172 486 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 IER5Q5VY09 327 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 METTL13Q8N6R0 699 aa16.13■□□□□ 0.17
CBX3-201ENST00000337620 PRPF31Q8WWY3 499 aaKnown RBP16.13■□□□□ 0.17
CBX3-201ENST00000337620 GAS2O43903 313 aaKnown RBP16.12■□□□□ 0.17
CBX3-201ENST00000337620 ELNP15502 786 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 NAMPTP43490 491 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 CPT1AP50416 773 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 CYP2J2P51589 502 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 BRDTQ58F21 947 aaPredicted RBP16.12■□□□□ 0.17
CBX3-201ENST00000337620 EFCAB12Q6NXP0 572 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 DEPTORQ8TB45 409 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 TCP11Q8WWU5 503 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 SRRDQ9UH36 339 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 EXOC7Q9UPT5 735 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 Q9Y3F1 56 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 IGKV6-21A0A0C4DH24 114 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 TISP43B9A030 160 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 H0YCG3 227 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 CYBAP13498 195 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 BEX3Q00994 111 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 MKRN4PQ13434 485 aaPredicted RBP16.12■□□□□ 0.17
CBX3-201ENST00000337620 ARID5BQ14865 1188 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 MAN2A1Q16706 1144 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 VWA3BQ502W6 1294 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 MIIPQ5JXC2 388 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 HVCN1Q96D96 273 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 ARHGAP28Q9P2N2 729 aa16.12■□□□□ 0.17
CBX3-201ENST00000337620 SUCLA2Q9P2R7 463 aaPredicted RBP16.12■□□□□ 0.17
CBX3-201ENST00000337620 AKAP3O75969 853 aa16.11■□□□□ 0.17
CBX3-201ENST00000337620 MYL3P08590 195 aa16.11■□□□□ 0.17
CBX3-201ENST00000337620 KLRC1P26715 233 aa16.11■□□□□ 0.17
CBX3-201ENST00000337620 PBX1P40424 430 aa16.11■□□□□ 0.17
CBX3-201ENST00000337620 CASP4P49662 377 aa16.11■□□□□ 0.17
CBX3-201ENST00000337620 DNM2P50570 870 aa16.11■□□□□ 0.17
CBX3-201ENST00000337620 CACNB2Q08289 660 aaPredicted RBP16.11■□□□□ 0.17
CBX3-201ENST00000337620 NFIL3Q16649 462 aa16.11■□□□□ 0.17
CBX3-201ENST00000337620 MAP4K3Q8IVH8 894 aa16.11■□□□□ 0.17
CBX3-201ENST00000337620 RETREG2Q8NC44 543 aa16.11■□□□□ 0.17
CBX3-201ENST00000337620 PSPC1Q8WXF1 523 aaKnown RBP16.11■□□□□ 0.17
CBX3-201ENST00000337620 NDST4Q9H3R1 872 aa16.11■□□□□ 0.17
CBX3-201ENST00000337620 PCIF1Q9H4Z3 704 aa16.11■□□□□ 0.17
CBX3-201ENST00000337620 DUSP11O75319 330 aaKnown RBP16.1■□□□□ 0.17
CBX3-201ENST00000337620 C22orf31O95567 290 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 SRGAP2CP0DJJ0 459 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 EPB41P11171 864 aaKnown RBP16.1■□□□□ 0.17
CBX3-201ENST00000337620 CLCN3P51790 818 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 GSDMDP57764 484 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 LAMTOR4Q0VGL1 99 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 PPFIA1Q13136 1202 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 CAPSQ13938 189 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 RHPN2Q8IUC4 686 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 ARMCX3Q9UH62 379 aaPredicted RBP16.1■□□□□ 0.17
CBX3-201ENST00000337620 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.1■□□□□ 0.172e-8■□□□□ 8.9
CBX3-201ENST00000337620 K7ERI5 159 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 MARSP56192 900 aaKnown RBP16.1■□□□□ 0.17
CBX3-201ENST00000337620 STRN3Q13033 797 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 MXD4Q14582 209 aaPredicted RBP16.1■□□□□ 0.17
CBX3-201ENST00000337620 GRIK4Q16099 956 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 FSCN1Q16658 493 aaKnown RBP16.1■□□□□ 0.17
CBX3-201ENST00000337620 KIAA0753Q2KHM9 967 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 FKBP15Q5T1M5 1219 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 FRMD5Q7Z6J6 570 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 CACTINQ8WUQ7 758 aaKnown RBP16.1■□□□□ 0.17
CBX3-201ENST00000337620 BICD1Q96G01 975 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 DMAC2Q9NW81 257 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 CGNQ9P2M7 1197 aaKnown RBP16.1■□□□□ 0.17
CBX3-201ENST00000337620 FRMD4BQ9Y2L6 1034 aa16.1■□□□□ 0.17
CBX3-201ENST00000337620 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.1■□□□□ 0.17
CBX3-201ENST00000337620 SLC16A3O15427 465 aaKnown RBP16.09■□□□□ 0.17
CBX3-201ENST00000337620 MAGEB2O15479 319 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 ADCY3O60266 1144 aa16.09■□□□□ 0.17
CBX3-201ENST00000337620 EXOC3O60645 756 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms