RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 PSMC1P62191 440 aaKnown RBP3.67□□□□□ -1.82
NEB-201ENST00000172853 DHX9Q08211 1270 aaKnown RBP3.67□□□□□ -1.82
NEB-201ENST00000172853 TFCP2Q12800 502 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 TAF1CQ15572 869 aaPredicted RBP3.67□□□□□ -1.82
NEB-201ENST00000172853 ZCCHC8Q6NZY4 707 aaKnown RBP3.67□□□□□ -1.82
NEB-201ENST00000172853 KCNV1Q6PIU1 500 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 ZNF653Q96CK0 615 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 FHDC1Q9C0D6 1143 aaPredicted RBP3.67□□□□□ -1.82
NEB-201ENST00000172853 HACL1Q9UJ83 578 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 HS6ST1O60243 411 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 LZTS3O60299 673 aaPredicted RBP3.67□□□□□ -1.82
NEB-201ENST00000172853 U2AF2P26368 475 aaKnown RBP eCLIP3.67□□□□□ -1.82
NEB-201ENST00000172853 NUDCD3Q8IVD9 361 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 CEP170P1Q96L14 293 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 LSM14BQ9BX40 385 aaKnown RBP3.67□□□□□ -1.82
NEB-201ENST00000172853 TRIM31Q9BZY9 425 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 KCNN2Q9H2S1 579 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 EDARQ9UNE0 448 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 LEMD3Q9Y2U8 911 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 HMOX2P30519 316 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 MMRN1Q13201 1228 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 SLC27A3Q5K4L6 730 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 STAG1Q8WVM7 1258 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 PHACTR1Q9C0D0 580 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 ASB14A6NK59 587 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 PIK3CDO00329 1044 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 HOXA2O43364 376 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 GAP43P17677 238 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 RCN1Q15293 331 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 PTPROQ16827 1216 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 PACS1Q6VY07 963 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 DCP1BQ8IZD4 617 aaKnown RBP3.66□□□□□ -1.82
NEB-201ENST00000172853 ARRDC4Q8NCT1 418 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 YME1L1Q96TA2 773 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 PARK7Q99497 189 aaKnown RBP3.66□□□□□ -1.82
NEB-201ENST00000172853 ELAC2Q9BQ52 826 aaKnown RBP3.66□□□□□ -1.82
NEB-201ENST00000172853 CCDC3Q9BQI4 270 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 SMARCAL1Q9NZC9 954 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 KLHL8Q9P2G9 620 aaPredicted RBP3.66□□□□□ -1.82
NEB-201ENST00000172853 NDOR1Q9UHB4 597 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 FBXL5Q9UKA1 691 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 AP3B1O00203 1094 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 WWP2O00308 870 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 HNRNPDLO14979 420 aaKnown RBP3.66□□□□□ -1.82
NEB-201ENST00000172853 CCT8P50990 548 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 COPB1P53618 953 aaKnown RBP3.66□□□□□ -1.82
NEB-201ENST00000172853 TFAP4Q01664 338 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 HABP4Q5JVS0 413 aaKnown RBP3.66□□□□□ -1.82
NEB-201ENST00000172853 GLT1D1Q96MS3 346 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 COLEC11Q9BWP8 271 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 C1QTNF7Q9BXJ2 289 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 COQ6Q9Y2Z9 468 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 MYO1FO00160 1098 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 MAN1A2O60476 641 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 ABCB4P21439 1286 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 HDLBPQ00341 1268 aaKnown RBP3.66□□□□□ -1.82
NEB-201ENST00000172853 PLD1Q13393 1074 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 IYDQ6PHW0 289 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 ANKRD42Q8N9B4 389 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 LRRC39Q96DD0 335 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 RUBCNLQ9H714 662 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 PSTPIP2Q9H939 334 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 HOMER3Q9NSC5 361 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 NCOA1Q15788 1441 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 SERPINB4P48594 390 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 ZSCAN1Q8NBB4 408 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 NAPGQ99747 312 aaPredicted RBP3.66□□□□□ -1.82
NEB-201ENST00000172853 UVRAGQ9P2Y5 699 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 ACSL4O60488 711 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 IFNAR2P48551 515 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 INAVAQ3KP66 663 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 PDXDC2PQ6P474 469 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 ASNSD1Q9NWL6 643 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 TTC41PQ6P2S7 1318 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 PEX14O75381 377 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 PRAMEP78395 509 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 BFSP2Q13515 415 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 KIAA0825Q8IV33 1275 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 WDR35Q9P2L0 1181 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 INTUQ9ULD6 942 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 PCDHA5Q9Y5H7 936 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 USP17L3A6NCW0 530 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 USP17L4A6NCW7 530 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 DTNBO60941 627 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 BBOX1O75936 387 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 SNX4O95219 450 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 PTPN1P18031 435 aaKnown RBP3.66□□□□□ -1.82
NEB-201ENST00000172853 ITGA6P23229 1130 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 ACADLP28330 430 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 RGS4P49798 205 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 ARHGDIBP52566 201 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 STAT2P52630 851 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 TRIM72Q6ZMU5 477 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 ANO5Q75V66 913 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 EEPD1Q7L9B9 569 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 USP17L1Q7RTZ2 530 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 PEG10Q86TG7 708 aaKnown RBP3.66□□□□□ -1.82
NEB-201ENST00000172853 MYOCDQ8IZQ8 938 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 STAMQ92783 540 aa3.66□□□□□ -1.82
NEB-201ENST00000172853 PPP1R2P1Q96PQ5 205 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms