RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Ccdc6D3YZP9 469 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Chrna9G3X8Z7 479 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Folh1O35409 752 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 CaluO35887 315 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Neurog2P70447 263 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Nsun2Q1HFZ0 757 aaKnown RBP10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Ccdc40Q8BI79 1192 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Sap130Q8BIH0 1057 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Afg3l2Q8JZQ2 802 aaKnown RBP10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Znf654Q9DAU9 571 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Rasgrp1Q9Z1S3 795 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Gm15262A0A140LIQ5 728 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Hnrnph2P70333 449 aaKnown RBP10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Palb2Q3U0P1 1104 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Lamc2Q61092 1191 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Senp6Q6P7W0 1132 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 LnpkQ7TQ95 425 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Klhl29Q80T74 875 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 P3h4Q8K2B0 443 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Vps37bQ8R0J7 285 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Apbb1ipQ8R5A3 670 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Pde6cQ91ZQ1 861 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Fmnl1Q9JL26 1094 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Capn15Q9JLG8 1095 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Tmed2Q9R0Q3 201 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Adam22Q9R1V6 904 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Adamtsl3G3UXC7 1706 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Orc4O88708 433 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 CopeO89079 308 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 CatspereP0DP43 985 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Rnf216P58283 853 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 SbdsP70122 250 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 StilQ60988 1262 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Ssxb10Q6XAR7 170 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Slc51aQ8R000 340 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Reep2Q8VCD6 254 aa10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 AticQ9CWJ9 592 aaKnown RBP10.18□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Zfyve9A2A8R0 1397 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Lmtk3Q5XJV6 1424 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Topaz1E5FYH1 1653 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Usp4P35123 962 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Akr1b8P45377 316 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Npdc1Q64322 332 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Myo6Q64331 1265 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Tas2r134Q7TQB0 298 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Serpinb13Q8CDC0 389 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 CpzQ8R4V4 654 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Aipl1Q924K1 328 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Tmco5aQ9D9D5 303 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Ccdc97Q9DBT3 340 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Stk4Q9JI11 487 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Lrrc38A2VDH3 298 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Kmt5aQ2YDW7 349 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Foxd4Q60688 444 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Mageb18Q8BQR7 327 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Champ1Q8K327 802 aaKnown RBP10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Ppp1r3aQ99MR9 1089 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Xab2Q9DCD2 855 aaKnown RBP10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Tmod2Q9JKK7 351 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Tlr2Q9QUN7 784 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Syngap1F6SEU4 1340 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 BcorQ8CGN4 1759 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Myh7bA2AQP0 1941 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Bfsp1A2AMT1 669 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 AoahO35298 574 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Fbxo10Q7TQF2 950 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Q8BGN9 141 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Aldh5a1Q8BWF0 523 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Zhx2Q8C0C0 836 aaKnown RBP10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Zfp449Q8CB76 518 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Ago4Q8CJF8 861 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 IntS13Q8QZV7 732 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Ddx39aQ8VDW0 427 aaKnown RBP10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 WaslQ91YD9 501 aa10.17□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Nav1Q8CH77 1875 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Apba1B2RUJ5 842 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Usp17lbE9Q9U0 468 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Krt13P08730 437 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 1810065E05RikQ5NC41 235 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Fbxo28Q8BIG4 368 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Dqx1Q924H9 718 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 ErmapQ9JLN5 566 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Slc26a4Q9R155 780 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Armc3A2AU72 881 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Hnrnph3D3Z3N4 346 aaKnown RBP10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 YdjcQ14BV6 310 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Muc3aQ3U5A2 218 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Ccdc84Q4VA36 332 aaKnown RBP10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Ppp1r1bQ60829 194 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Slc17a8Q8BFU8 601 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Dnajc28Q8VCE1 385 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Atp5c1Q91VR2 298 aaKnown RBP10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Ubxn6Q99PL6 442 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Cep83Q9D5R3 692 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Hsd3b7Q9EQC1 369 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Pnpla6Q3TRM4 1355 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Prss51A0A286YDY8 319 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Magea10A2AMW4 325 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Gm21962L7N280 338 aa10.16□□□□□ -0.78
Col6a1-201ENSMUST00000001147 Gm7995L7N2E4 160 aa10.16□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms