RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 HPF1Q05164 967 aa4.64□□□□□ -1.67
snR55snR55 ESS1P22696 170 aa4.63□□□□□ -1.67
snR55snR55 YJU3P28321 313 aa4.63□□□□□ -1.67
snR55snR55 AAD14P42884 376 aa4.63□□□□□ -1.67
snR55snR55 GLN1P32288 370 aaKnown RBP4.62□□□□□ -1.67
snR55snR55 RSC30P38781 883 aa4.62□□□□□ -1.67
snR55snR55 MTC5Q03897 1148 aa4.62□□□□□ -1.67
snR55snR55 ITT1Q04638 464 aa4.62□□□□□ -1.67
snR55snR55 ARG82P07250 355 aa4.6□□□□□ -1.67
snR55snR55 YJR098CP47139 656 aa4.6□□□□□ -1.67
snR55snR55 DLD1P32891 587 aa4.59□□□□□ -1.67
snR55snR55 LSC2P53312 427 aa4.59□□□□□ -1.67
snR55snR55 APP1P53933 587 aa4.59□□□□□ -1.67
snR55snR55 KTR1P27810 393 aaKnown RBP4.58□□□□□ -1.68
snR55snR55 EMW1P42842 904 aaKnown RBP4.58□□□□□ -1.68
snR55snR55 TCB1Q12466 1186 aa4.58□□□□□ -1.68
snR55snR55 CCP1P00431 361 aa4.57□□□□□ -1.68
snR55snR55 ROG3P43602 733 aa4.57□□□□□ -1.68
snR55snR55 ATF2P53296 535 aa4.57□□□□□ -1.68
snR55snR55 UBP2Q01476 1272 aa4.57□□□□□ -1.68
snR55snR55 GLC3P32775 704 aa4.56□□□□□ -1.68
snR55snR55 FIG4P42837 879 aa4.55□□□□□ -1.68
snR55snR55 YNR021WP53723 404 aaKnown RBP4.55□□□□□ -1.68
snR55snR55 TY1A-MR1Q04215 440 aa4.55□□□□□ -1.68
snR55snR55 OSH7P38755 437 aa4.54□□□□□ -1.68
snR55snR55 PKH3Q03306 898 aaPredicted RBP4.53□□□□□ -1.68
snR55snR55 DFG5Q05031 458 aa4.52□□□□□ -1.69
snR55snR55 YPR204WQ08995 1032 aa4.52□□□□□ -1.69
snR55snR55 YPR084WQ06821 456 aa4.51□□□□□ -1.69
snR55snR55 DPH6Q12429 685 aa4.51□□□□□ -1.69
snR55snR55 ARG8P18544 423 aa4.5□□□□□ -1.69
snR55snR55 MKS1P34072 584 aa4.5□□□□□ -1.69
snR55snR55 NAM8Q00539 523 aaKnown RBP4.5□□□□□ -1.69
snR55snR55 CDC19P00549 500 aaKnown RBP4.49□□□□□ -1.69
snR55snR55 ICP55P40051 511 aa4.49□□□□□ -1.69
snR55snR55 JJJ3P47138 172 aa4.49□□□□□ -1.69
snR55snR55 MDJ1P35191 511 aa4.48□□□□□ -1.69
snR55snR55 STE6P12866 1290 aa4.47□□□□□ -1.69
snR55snR55 FBP26P32604 452 aa4.47□□□□□ -1.69
snR55snR55 LYS5P50113 272 aa4.47□□□□□ -1.69
snR55snR55 AIM7Q12156 149 aa4.47□□□□□ -1.69
snR55snR55 RAD59Q12223 238 aa4.47□□□□□ -1.69
snR55snR55 TEC1P18412 486 aa4.46□□□□□ -1.7
snR55snR55 CSN12P47130 423 aa4.46□□□□□ -1.7
snR55snR55 BDS1Q08347 646 aa4.46□□□□□ -1.7
snR55snR55 PUS1Q12211 544 aaKnown RBP4.46□□□□□ -1.7
snR55snR55 LSB3P43603 459 aaKnown RBP4.45□□□□□ -1.7
snR55snR55 VTC4P47075 721 aa4.45□□□□□ -1.7
snR55snR55 PHM7Q12252 991 aa4.44□□□□□ -1.7
snR55snR55 YFL066CP43538 392 aa4.43□□□□□ -1.7
snR55snR55 CUZ1P53899 274 aa4.42□□□□□ -1.7
snR55snR55 MAK16P10962 306 aaPredicted RBP4.41□□□□□ -1.7
snR55snR55 NSG2P53898 299 aa4.41□□□□□ -1.7
snR55snR55 ISU1Q03020 165 aa4.41□□□□□ -1.7
snR55snR55 DAL1P32375 460 aa4.4□□□□□ -1.71
snR55snR55 GUT2P32191 649 aa4.39□□□□□ -1.71
snR55snR55 ATG20Q07528 640 aa4.39□□□□□ -1.71
snR55snR55 FRA1Q07825 749 aa4.38□□□□□ -1.71
snR55snR55 SLA1P32790 1244 aa4.37□□□□□ -1.71
snR55snR55 THI72Q08579 599 aa4.37□□□□□ -1.71
snR55snR55 TY1A-DR3Q12441 440 aa4.37□□□□□ -1.71
snR55snR55 AI1P03875 834 aa4.36□□□□□ -1.71
snR55snR55 CEM1P39525 442 aa4.36□□□□□ -1.71
snR55snR55 CCT8P47079 568 aaKnown RBP4.36□□□□□ -1.71
snR55snR55 NAF1P53919 492 aaKnown RBP4.36□□□□□ -1.71
snR55snR55 SSN3P39073 555 aa4.35□□□□□ -1.71
snR55snR55 SYT1Q06836 1226 aa4.35□□□□□ -1.71
snR55snR55 APL6P46682 809 aa4.34□□□□□ -1.71
snR55snR55 UBP15P50101 1230 aa4.34□□□□□ -1.71
snR55snR55 STE20Q03497 939 aaKnown RBP4.34□□□□□ -1.71
snR55snR55 WTM2Q12206 467 aa4.34□□□□□ -1.71
snR55snR55 SSA2P10592 639 aaKnown RBP4.33□□□□□ -1.72
snR55snR55 DIT1P21623 536 aa4.33□□□□□ -1.72
snR55snR55 DLD3P39976 496 aaKnown RBP4.33□□□□□ -1.72
snR55snR55 SBE2P42223 864 aaKnown RBP4.33□□□□□ -1.72
snR55snR55 MSN5P52918 1224 aa4.33□□□□□ -1.72
snR55snR55 YMR265CQ03508 461 aaKnown RBP4.32□□□□□ -1.72
snR55snR55 SPT2P06843 333 aaPredicted RBP4.31□□□□□ -1.72
snR55snR55 YDR461C-AQ2V2P7 80 aa4.31□□□□□ -1.72
snR55snR55 YPR053CQ6Q5F3 151 aa4.31□□□□□ -1.72
snR55snR55 RPP2BP02400 110 aaKnown RBP4.3□□□□□ -1.72
snR55snR55 ISF1P32488 338 aa4.3□□□□□ -1.72
snR55snR55 SKN7P38889 622 aa4.3□□□□□ -1.72
snR55snR55 HAL5P38970 855 aaKnown RBP4.3□□□□□ -1.72
snR55snR55 NRD1P53617 575 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
snR55snR55 KRE33P53914 1056 aaKnown RBP4.3□□□□□ -1.72
snR55snR55 ADE12P80210 433 aaKnown RBP4.3□□□□□ -1.72
snR55snR55 ISR1Q06098 443 aaKnown RBP4.3□□□□□ -1.72
snR55snR55 TDA6Q06466 467 aa4.3□□□□□ -1.72
snR55snR55 KIN1P13185 1064 aa4.29□□□□□ -1.72
snR55snR55 EMP47P43555 445 aa4.29□□□□□ -1.72
snR55snR55 MCM16Q12262 181 aa4.29□□□□□ -1.72
snR55snR55 UTR2P32623 467 aa4.28□□□□□ -1.72
snR55snR55 SHM1P37292 490 aaPredicted RBP4.27□□□□□ -1.73
snR55snR55 UTP7P40055 554 aaKnown RBP4.27□□□□□ -1.73
snR55snR55 MRX12P47084 519 aa4.27□□□□□ -1.73
snR55snR55 DAT1P13483 248 aaKnown RBP4.26□□□□□ -1.73
snR55snR55 CSE4P36012 229 aa4.26□□□□□ -1.73
snR55snR55 AHP1P38013 176 aaKnown RBP4.26□□□□□ -1.73
snR55snR55 SUM1P46676 1062 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms