RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeastyeast

Gene YDC1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDC1YPL087W GUT2P32191 649 aa8.35□□□□□ -1.07
YDC1YPL087W CST6P40535 587 aa8.35□□□□□ -1.07
YDC1YPL087W MRX12P47084 519 aa8.35□□□□□ -1.07
YDC1YPL087W RTG2P32608 588 aaKnown RBP8.33□□□□□ -1.08
YDC1YPL087W IXR1P33417 597 aa8.33□□□□□ -1.08
YDC1YPL087W FIG4P42837 879 aa8.33□□□□□ -1.08
YDC1YPL087W STE20Q03497 939 aaKnown RBP8.33□□□□□ -1.08
YDC1YPL087W HED1Q03937 162 aa8.33□□□□□ -1.08
YDC1YPL087W YDJ1P25491 409 aaKnown RBP8.32□□□□□ -1.08
YDC1YPL087W ATG3P40344 310 aa8.32□□□□□ -1.08
YDC1YPL087W MCM16Q12262 181 aa8.32□□□□□ -1.08
YDC1YPL087W RAS1P01119 309 aa8.31□□□□□ -1.08
YDC1YPL087W SIS2P36024 562 aa8.3□□□□□ -1.08
YDC1YPL087W PUS5Q06244 254 aa8.3□□□□□ -1.08
YDC1YPL087W ENO2P00925 437 aaKnown RBP8.29□□□□□ -1.08
YDC1YPL087W FRA1Q07825 749 aa8.29□□□□□ -1.08
YDC1YPL087W YPR204WQ08995 1032 aa8.27□□□□□ -1.09
YDC1YPL087W EMP47P43555 445 aa8.26□□□□□ -1.09
YDC1YPL087W RIM21P48565 533 aa8.26□□□□□ -1.09
YDC1YPL087W RTT106P40161 455 aa8.25□□□□□ -1.09
YDC1YPL087W YPR084WQ06821 456 aa8.25□□□□□ -1.09
YDC1YPL087W ENV9Q08651 330 aa8.25□□□□□ -1.09
YDC1YPL087W CDC4P07834 779 aa8.22□□□□□ -1.09
YDC1YPL087W UTP13Q05946 817 aaKnown RBP8.22□□□□□ -1.09
YDC1YPL087W ENO1P00924 437 aaKnown RBP8.21□□□□□ -1.1
YDC1YPL087W ISF1P32488 338 aa8.21□□□□□ -1.1
YDC1YPL087W TRK1P12685 1235 aa8.2□□□□□ -1.1
YDC1YPL087W SSA4P22202 642 aaKnown RBP8.2□□□□□ -1.1
YDC1YPL087W MRT4P33201 236 aaKnown RBP8.2□□□□□ -1.1
YDC1YPL087W MRX10Q05648 414 aa8.2□□□□□ -1.1
YDC1YPL087W RPP2BP02400 110 aaKnown RBP8.19□□□□□ -1.1
YDC1YPL087W EMW1P42842 904 aaKnown RBP8.19□□□□□ -1.1
YDC1YPL087W HST3P53687 447 aa8.19□□□□□ -1.1
YDC1YPL087W ATG20Q07528 640 aa8.18□□□□□ -1.1
YDC1YPL087W APP1P53933 587 aa8.16□□□□□ -1.1
YDC1YPL087W MKS1P34072 584 aa8.15□□□□□ -1.1
YDC1YPL087W APL6P46682 809 aa8.15□□□□□ -1.1
YDC1YPL087W AFT1P22149 690 aa8.14□□□□□ -1.11
YDC1YPL087W TTI1P36097 1038 aa8.14□□□□□ -1.11
YDC1YPL087W SOH1P38633 127 aa8.14□□□□□ -1.11
YDC1YPL087W CLA4P48562 842 aa8.14□□□□□ -1.11
YDC1YPL087W UGA3P26370 528 aa8.13□□□□□ -1.11
YDC1YPL087W MET32Q12041 191 aa8.13□□□□□ -1.11
YDC1YPL087W FBP26P32604 452 aa8.12□□□□□ -1.11
YDC1YPL087W AIR1P40507 360 aaKnown RBP8.12□□□□□ -1.11
YDC1YPL087W MSB3P48566 633 aaPredicted RBP8.12□□□□□ -1.11
YDC1YPL087W ISR1Q06098 443 aaKnown RBP8.12□□□□□ -1.11
YDC1YPL087W PEP12P32854 288 aa8.11□□□□□ -1.11
YDC1YPL087W ASH1P34233 588 aa8.11□□□□□ -1.11
YDC1YPL087W YBL086CP38177 466 aa8.11□□□□□ -1.11
YDC1YPL087W YFL034WP43564 1073 aa8.11□□□□□ -1.11
YDC1YPL087W RDS2P19541 446 aaKnown RBP8.1□□□□□ -1.11
YDC1YPL087W CPS1P27614 576 aa8.1□□□□□ -1.11
YDC1YPL087W GCR2Q01722 534 aa8.1□□□□□ -1.11
YDC1YPL087W ITT1Q04638 464 aa8.1□□□□□ -1.11
YDC1YPL087W ISU1Q03020 165 aa8.09□□□□□ -1.11
YDC1YPL087W BDS1Q08347 646 aa8.09□□□□□ -1.11
YDC1YPL087W SRF1Q12516 437 aa8.08□□□□□ -1.12
YDC1YPL087W TBS1P38114 1094 aa8.07□□□□□ -1.12
YDC1YPL087W RGA1P39083 1007 aa8.07□□□□□ -1.12
YDC1YPL087W TGL4P36165 910 aa8.06□□□□□ -1.12
YDC1YPL087W ARG82P07250 355 aa8.05□□□□□ -1.12
YDC1YPL087W STE6P12866 1290 aa8.05□□□□□ -1.12
YDC1YPL087W HAP4P14064 554 aa8.05□□□□□ -1.12
YDC1YPL087W UTR2P32623 467 aa8.05□□□□□ -1.12
YDC1YPL087W DLD3P39976 496 aaKnown RBP8.05□□□□□ -1.12
YDC1YPL087W KTR7P40504 517 aa8.05□□□□□ -1.12
YDC1YPL087W DFG5Q05031 458 aa8.05□□□□□ -1.12
YDC1YPL087W SUB2Q07478 446 aaKnown RBP8.05□□□□□ -1.12
YDC1YPL087W SPT2P06843 333 aaPredicted RBP8.04□□□□□ -1.12
YDC1YPL087W PHO87P25360 923 aa8.04□□□□□ -1.12
YDC1YPL087W TSC13Q99190 310 aa8.04□□□□□ -1.12
YDC1YPL087W GAL2P13181 574 aa8.03□□□□□ -1.12
YDC1YPL087W MIP1P15801 1254 aa8.03□□□□□ -1.12
YDC1YPL087W BRE2P43132 505 aa8.03□□□□□ -1.12
YDC1YPL087W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
YDC1YPL087W SSA1P10591 642 aaKnown RBP8.02□□□□□ -1.13
YDC1YPL087W DAT1P13483 248 aaKnown RBP8.02□□□□□ -1.13
YDC1YPL087W HAL5P38970 855 aaKnown RBP8.02□□□□□ -1.13
YDC1YPL087W AIM9P40053 627 aaKnown RBP8.02□□□□□ -1.13
YDC1YPL087W HDA3Q06623 655 aa8.02□□□□□ -1.13
YDC1YPL087W DNA2P38859 1522 aa8.02□□□□□ -1.13
YDC1YPL087W RGA2Q06407 1009 aa8.01□□□□□ -1.13
YDC1YPL087W PTK2P47116 818 aaKnown RBP8□□□□□ -1.13
YDC1YPL087W GAS4Q08271 471 aa8□□□□□ -1.13
YDC1YPL087W PUP1P25043 261 aa7.99□□□□□ -1.13
YDC1YPL087W YJR115WP47152 169 aa7.99□□□□□ -1.13
YDC1YPL087W RPL34AP87262 121 aaPredicted RBP7.99□□□□□ -1.13
YDC1YPL087W ECM23Q02710 187 aa7.99□□□□□ -1.13
YDC1YPL087W AAD14P42884 376 aa7.98□□□□□ -1.13
YDC1YPL087W PDI1P17967 522 aaKnown RBP7.97□□□□□ -1.13
YDC1YPL087W WTM2Q12206 467 aa7.97□□□□□ -1.13
YDC1YPL087W NUP85P46673 744 aa7.96□□□□□ -1.14
YDC1YPL087W ACS2P52910 683 aaKnown RBP7.96□□□□□ -1.14
YDC1YPL087W YLR346CQ06139 101 aa7.96□□□□□ -1.14
YDC1YPL087W SLX8P40072 274 aa7.95□□□□□ -1.14
YDC1YPL087W NTH2P35172 780 aa7.94□□□□□ -1.14
YDC1YPL087W UBX7P38349 436 aa7.94□□□□□ -1.14
YDC1YPL087W LSC2P53312 427 aa7.94□□□□□ -1.14
YDC1YPL087W NOB1Q08444 459 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms