RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W RDS2P19541 446 aaKnown RBP4.1□□□□□ -1.75
BRO1YPL084W SIS2P36024 562 aa4.1□□□□□ -1.75
BRO1YPL084W NOB1Q08444 459 aaKnown RBP4.1□□□□□ -1.75
BRO1YPL084W MOD5P07884 428 aa4.09□□□□□ -1.75
BRO1YPL084W GUT2P32191 649 aa4.09□□□□□ -1.75
BRO1YPL084W GEF1P37020 779 aa4.09□□□□□ -1.75
BRO1YPL084W RRD1P40454 393 aaKnown RBP4.09□□□□□ -1.76
BRO1YPL084W KTR7P40504 517 aa4.09□□□□□ -1.76
BRO1YPL084W YPR084WQ06821 456 aa4.09□□□□□ -1.76
BRO1YPL084W FRA1Q07825 749 aa4.09□□□□□ -1.76
BRO1YPL084W PUP1P25043 261 aa4.08□□□□□ -1.76
BRO1YPL084W VAC17P25591 423 aa4.08□□□□□ -1.76
BRO1YPL084W MRF1P30775 413 aaPredicted RBP4.08□□□□□ -1.76
BRO1YPL084W TPD3P31383 635 aa4.08□□□□□ -1.76
BRO1YPL084W TGL4P36165 910 aa4.08□□□□□ -1.76
BRO1YPL084W PEP12P32854 288 aa4.07□□□□□ -1.76
BRO1YPL084W YML083CQ04526 418 aa4.07□□□□□ -1.76
BRO1YPL084W RPL34AP87262 121 aaPredicted RBP4.07□□□□□ -1.76
BRO1YPL084W ITT1Q04638 464 aa4.07□□□□□ -1.76
BRO1YPL084W MRX12P47084 519 aa4.06□□□□□ -1.76
BRO1YPL084W ECM23Q02710 187 aa4.06□□□□□ -1.76
BRO1YPL084W SDH2P21801 266 aa4.05□□□□□ -1.76
BRO1YPL084W KIP2P28743 706 aa4.05□□□□□ -1.76
BRO1YPL084W BDP1P46678 594 aa4.05□□□□□ -1.76
BRO1YPL084W PUS5Q06244 254 aa4.05□□□□□ -1.76
BRO1YPL084W SOH1P38633 127 aa4.05□□□□□ -1.76
BRO1YPL084W FRK1Q03002 865 aaPredicted RBP4.05□□□□□ -1.76
BRO1YPL084W BCK2P33306 851 aa4.04□□□□□ -1.76
BRO1YPL084W ATG3P40344 310 aa4.04□□□□□ -1.76
BRO1YPL084W IXR1P33417 597 aa4.04□□□□□ -1.76
BRO1YPL084W SLX8P40072 274 aa4.03□□□□□ -1.76
BRO1YPL084W APL6P46682 809 aa4.03□□□□□ -1.76
BRO1YPL084W GAL2P13181 574 aa4.03□□□□□ -1.76
BRO1YPL084W CST6P40535 587 aa4.03□□□□□ -1.76
BRO1YPL084W UBX7P38349 436 aa4.02□□□□□ -1.77
BRO1YPL084W APP1P53933 587 aa4.02□□□□□ -1.77
BRO1YPL084W SYH1Q02875 849 aaKnown RBP4.02□□□□□ -1.77
BRO1YPL084W UTP13Q05946 817 aaKnown RBP4.02□□□□□ -1.77
BRO1YPL084W ISR1Q06098 443 aaKnown RBP4.02□□□□□ -1.77
BRO1YPL084W ATG20Q07528 640 aa4.01□□□□□ -1.77
BRO1YPL084W HAL5P38970 855 aaKnown RBP4.01□□□□□ -1.77
BRO1YPL084W YEL077CQ3E7X8 1277 aa4.01□□□□□ -1.77
BRO1YPL084W XDJ1P39102 459 aa4□□□□□ -1.77
BRO1YPL084W YML020WQ03722 664 aa4□□□□□ -1.77
BRO1YPL084W CBC2Q08920 208 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
BRO1YPL084W PDI1P17967 522 aaKnown RBP4□□□□□ -1.77
BRO1YPL084W PHO87P25360 923 aa4□□□□□ -1.77
BRO1YPL084W CDC3P32457 520 aaKnown RBP4□□□□□ -1.77
BRO1YPL084W ACS2P52910 683 aaKnown RBP4□□□□□ -1.77
BRO1YPL084W MIP1P15801 1254 aa3.99□□□□□ -1.77
BRO1YPL084W HAP4P14064 554 aa3.99□□□□□ -1.77
BRO1YPL084W EMW1P42842 904 aaKnown RBP3.99□□□□□ -1.77
BRO1YPL084W TSC13Q99190 310 aa3.99□□□□□ -1.77
BRO1YPL084W HDA3Q06623 655 aa3.98□□□□□ -1.77
BRO1YPL084W AMS1P22855 1083 aa3.97□□□□□ -1.77
BRO1YPL084W AIM9P40053 627 aaKnown RBP3.97□□□□□ -1.77
BRO1YPL084W ROM1P53046 1155 aa3.97□□□□□ -1.77
BRO1YPL084W HED1Q03937 162 aa3.96□□□□□ -1.77
BRO1YPL084W HAT1Q12341 374 aa3.96□□□□□ -1.77
BRO1YPL084W FBP26P32604 452 aa3.96□□□□□ -1.78
BRO1YPL084W MKS1P34072 584 aa3.96□□□□□ -1.78
BRO1YPL084W YFL034WP43564 1073 aa3.96□□□□□ -1.78
BRO1YPL084W ISU1Q03020 165 aa3.96□□□□□ -1.78
BRO1YPL084W GAS4Q08271 471 aa3.96□□□□□ -1.78
BRO1YPL084W RAS1P01119 309 aa3.95□□□□□ -1.78
BRO1YPL084W MRT4P33201 236 aaKnown RBP3.95□□□□□ -1.78
BRO1YPL084W NTH2P35172 780 aa3.95□□□□□ -1.78
BRO1YPL084W TPS3P38426 1054 aaKnown RBP3.95□□□□□ -1.78
BRO1YPL084W CLA4P48562 842 aa3.95□□□□□ -1.78
BRO1YPL084W PUF6Q04373 656 aaKnown RBP3.95□□□□□ -1.78
BRO1YPL084W DAT1P13483 248 aaKnown RBP3.94□□□□□ -1.78
BRO1YPL084W CWC15Q03772 175 aaKnown RBP3.94□□□□□ -1.78
BRO1YPL084W NOP8Q08287 484 aaPredicted RBP3.94□□□□□ -1.78
BRO1YPL084W UTR2P32623 467 aa3.94□□□□□ -1.78
BRO1YPL084W YBL086CP38177 466 aa3.94□□□□□ -1.78
BRO1YPL084W PUN1Q06991 263 aa3.94□□□□□ -1.78
BRO1YPL084W VAN1P23642 535 aa3.93□□□□□ -1.78
BRO1YPL084W DFG5Q05031 458 aa3.93□□□□□ -1.78
BRO1YPL084W SWI5P08153 709 aa3.93□□□□□ -1.78
BRO1YPL084W SPT2P06843 333 aaPredicted RBP3.92□□□□□ -1.78
BRO1YPL084W RPS6AP0CX37 236 aaKnown RBP3.92□□□□□ -1.78
BRO1YPL084W RPS6BP0CX38 236 aaPredicted RBP3.92□□□□□ -1.78
BRO1YPL084W STE6P12866 1290 aa3.92□□□□□ -1.78
BRO1YPL084W SSF1P38789 453 aaPredicted RBP3.92□□□□□ -1.78
BRO1YPL084W PNP1Q05788 311 aa3.92□□□□□ -1.78
BRO1YPL084W BDS1Q08347 646 aa3.92□□□□□ -1.78
BRO1YPL084W MET32Q12041 191 aa3.92□□□□□ -1.78
BRO1YPL084W SLD2P34252 453 aa3.92□□□□□ -1.78
BRO1YPL084W TBS1P38114 1094 aa3.92□□□□□ -1.78
BRO1YPL084W AIR1P40507 360 aaKnown RBP3.92□□□□□ -1.78
BRO1YPL084W KAR5Q04746 504 aa3.92□□□□□ -1.78
BRO1YPL084W CYT1P07143 309 aa3.91□□□□□ -1.78
BRO1YPL084W TRS33Q99394 268 aa3.91□□□□□ -1.78
BRO1YPL084W SRS2P12954 1174 aa3.91□□□□□ -1.78
BRO1YPL084W WTM2Q12206 467 aa3.91□□□□□ -1.78
BRO1YPL084W RPP2BP02400 110 aaKnown RBP3.9□□□□□ -1.78
BRO1YPL084W YBL113CQ7M4S9 792 aa3.9□□□□□ -1.78
BRO1YPL084W DPS1P04802 557 aaKnown RBP3.9□□□□□ -1.79
BRO1YPL084W UGA3P26370 528 aa3.9□□□□□ -1.79
BRO1YPL084W ALD4P46367 519 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms