RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C RTS3P53289 263 aa11.79□□□□□ -0.52
SSN3YPL042C APP1P53933 587 aa11.79□□□□□ -0.52
SSN3YPL042C MPP10P47083 593 aaKnown RBP11.78□□□□□ -0.52
SSN3YPL042C BUB1P41695 1021 aaKnown RBP RIP-Chip data11.78□□□□□ -0.52not detected
SSN3YPL042C RSF2P46974 1380 aa11.77□□□□□ -0.52
SSN3YPL042C PRD1P25375 712 aa11.77□□□□□ -0.53
SSN3YPL042C CDC45Q08032 650 aa11.77□□□□□ -0.53
SSN3YPL042C AKL1P38080 1108 aaKnown RBP11.76□□□□□ -0.53
SSN3YPL042C ENV9Q08651 330 aa11.76□□□□□ -0.53
SSN3YPL042C YRF1-4O13559 1382 aa11.76□□□□□ -0.53
SSN3YPL042C XKS1P42826 600 aa11.75□□□□□ -0.53
SSN3YPL042C DSD1P53095 428 aa11.74□□□□□ -0.53
SSN3YPL042C BRN1P38170 754 aa11.73□□□□□ -0.53
SSN3YPL042C THI22Q06490 572 aa11.73□□□□□ -0.53
SSN3YPL042C NOP8Q08287 484 aaPredicted RBP11.73□□□□□ -0.53
SSN3YPL042C NHA1Q99271 985 aa11.72□□□□□ -0.53
SSN3YPL042C SIR4P11978 1358 aa11.72□□□□□ -0.53
SSN3YPL042C SUI2P20459 304 aaKnown RBP11.71□□□□□ -0.53
SSN3YPL042C TIF4632P39936 914 aaKnown RBP11.71□□□□□ -0.54
SSN3YPL042C RCR1P38212 213 aa11.7□□□□□ -0.54
SSN3YPL042C OSW7P43611 510 aa11.7□□□□□ -0.54
SSN3YPL042C ENV11P53246 860 aa11.7□□□□□ -0.54
SSN3YPL042C RVB2Q12464 471 aaKnown RBP11.7□□□□□ -0.54
SSN3YPL042C RPS0AP32905 252 aaKnown RBP11.69□□□□□ -0.54
SSN3YPL042C IES2P40154 320 aa11.69□□□□□ -0.54
SSN3YPL042C JSN1P47135 1091 aaKnown RBP RIP-Chip data11.69□□□□□ -0.54not detected
SSN3YPL042C IMH1Q06704 911 aaKnown RBP11.69□□□□□ -0.54
SSN3YPL042C SAP155P43612 1002 aa11.68□□□□□ -0.54
SSN3YPL042C YRF1-3P0CX14 1859 aa11.68□□□□□ -0.54
SSN3YPL042C YRF1-7P0CX15 1859 aa11.68□□□□□ -0.54
SSN3YPL042C YRF1-6P53819 1859 aa11.68□□□□□ -0.54
SSN3YPL042C HSP104P31539 908 aaKnown RBP11.68□□□□□ -0.54
SSN3YPL042C HEF3P53978 1044 aaKnown RBP11.68□□□□□ -0.54
SSN3YPL042C NTH2P35172 780 aa11.67□□□□□ -0.54
SSN3YPL042C CTF4Q01454 927 aa11.67□□□□□ -0.54
SSN3YPL042C TPD3P31383 635 aa11.66□□□□□ -0.54
SSN3YPL042C YJR008WP47085 338 aa11.66□□□□□ -0.54
SSN3YPL042C SSA1P10591 642 aaKnown RBP11.65□□□□□ -0.54
SSN3YPL042C SSA2P10592 639 aaKnown RBP11.65□□□□□ -0.54
SSN3YPL042C SPT16P32558 1035 aaKnown RBP11.65□□□□□ -0.54
SSN3YPL042C YNL050CP53952 270 aa11.65□□□□□ -0.54
SSN3YPL042C RTT109Q07794 436 aa11.65□□□□□ -0.54
SSN3YPL042C ISW1P38144 1129 aa11.64□□□□□ -0.55
SSN3YPL042C FAR11P53917 953 aa11.64□□□□□ -0.55
SSN3YPL042C AOS1Q06624 347 aa11.64□□□□□ -0.55
SSN3YPL042C TLG1Q03322 224 aa11.63□□□□□ -0.55
SSN3YPL042C ROM2P51862 1356 aaKnown RBP11.63□□□□□ -0.55
SSN3YPL042C FPR3P38911 411 aaKnown RBP11.62□□□□□ -0.55
SSN3YPL042C MEC3Q02574 474 aa11.62□□□□□ -0.55
SSN3YPL042C INP54Q08227 384 aaKnown RBP11.62□□□□□ -0.55
SSN3YPL042C YKL133CP36066 463 aa11.61□□□□□ -0.55
SSN3YPL042C SSP1P38871 571 aa11.61□□□□□ -0.55
SSN3YPL042C YIL055CP40523 627 aaKnown RBP11.61□□□□□ -0.55
SSN3YPL042C PLP2Q12017 286 aa11.61□□□□□ -0.55
SSN3YPL042C NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.6□□□□□ -0.55not detected
SSN3YPL042C ZDS1P50111 915 aaKnown RBP11.59□□□□□ -0.55
SSN3YPL042C ADE16P54113 591 aaKnown RBP11.59□□□□□ -0.55
SSN3YPL042C NUP145P49687 1317 aa11.59□□□□□ -0.55
SSN3YPL042C MAM1P40065 302 aa11.59□□□□□ -0.55
SSN3YPL042C HSP82P02829 709 aaKnown RBP11.57□□□□□ -0.56
SSN3YPL042C GEF1P37020 779 aa11.57□□□□□ -0.56
SSN3YPL042C FUN12P39730 1002 aaKnown RBP11.57□□□□□ -0.56
SSN3YPL042C GYP7P48365 746 aa11.57□□□□□ -0.56
SSN3YPL042C SSF1P38789 453 aaPredicted RBP11.56□□□□□ -0.56
SSN3YPL042C KCC4P25389 1037 aa11.55□□□□□ -0.56
SSN3YPL042C RRT14P40470 206 aa11.55□□□□□ -0.56
SSN3YPL042C DOT5P40553 215 aa11.55□□□□□ -0.56
SSN3YPL042C FRK1Q03002 865 aaPredicted RBP11.55□□□□□ -0.56
SSN3YPL042C YPR148CQ06523 435 aa11.55□□□□□ -0.56
SSN3YPL042C EDE1P34216 1381 aa11.55□□□□□ -0.56
SSN3YPL042C UGA3P26370 528 aa11.55□□□□□ -0.56
SSN3YPL042C OSM1P21375 501 aaKnown RBP11.54□□□□□ -0.56
SSN3YPL042C FOX2Q02207 900 aaKnown RBP11.54□□□□□ -0.56
SSN3YPL042C NAB3P38996 802 aaKnown RBP RIP-Chip data11.53□□□□□ -0.56not detected
SSN3YPL042C PDR1P12383 1068 aa11.52□□□□□ -0.56
SSN3YPL042C SPC42P36094 363 aa11.52□□□□□ -0.56
SSN3YPL042C NSE3Q05541 303 aa11.52□□□□□ -0.56
SSN3YPL042C BMS1Q08965 1183 aaKnown RBP11.52□□□□□ -0.56
SSN3YPL042C MAK21Q12176 1025 aaKnown RBP11.52□□□□□ -0.56
SSN3YPL042C LYS2P07702 1392 aa11.52□□□□□ -0.57
SSN3YPL042C SPT2P06843 333 aaPredicted RBP11.52□□□□□ -0.57
SSN3YPL042C ATG13Q06628 738 aa11.52□□□□□ -0.57
SSN3YPL042C YIL092WP40497 633 aa11.51□□□□□ -0.57
SSN3YPL042C COQ4O13525 335 aa11.5□□□□□ -0.57
SSN3YPL042C COBP00163 385 aa11.5□□□□□ -0.57
SSN3YPL042C RAD2P07276 1031 aa11.5□□□□□ -0.57
SSN3YPL042C SRT1Q03175 343 aa11.5□□□□□ -0.57
SSN3YPL042C SLX8P40072 274 aa11.49□□□□□ -0.57
SSN3YPL042C YBR287WP38355 427 aa11.49□□□□□ -0.57
SSN3YPL042C AIM21P40563 679 aa11.49□□□□□ -0.57
SSN3YPL042C DAL5P15365 543 aa11.48□□□□□ -0.57
SSN3YPL042C YKR075CP36155 307 aa11.48□□□□□ -0.57
SSN3YPL042C BUD27P43573 796 aaKnown RBP RIP-Chip data11.48□□□□□ -0.57not detected
SSN3YPL042C YBP2P53169 641 aa11.47□□□□□ -0.57
SSN3YPL042C ALE1Q08548 619 aa11.47□□□□□ -0.57
SSN3YPL042C YMR074CQ04773 145 aa11.46□□□□□ -0.58
SSN3YPL042C RIM15P43565 1770 aa11.45□□□□□ -0.58
SSN3YPL042C TY4A-JP47023 414 aa11.44□□□□□ -0.58
SSN3YPL042C DOS2P54858 310 aa11.44□□□□□ -0.58
SSN3YPL042C YOL057WQ08225 711 aa11.44□□□□□ -0.58
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms