RNA–Protein interactions for RNA: YOR124C

UBP2, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP2, Length 3,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP2YOR124C UBP9P39967 754 aa2.56□□□□□ -2
UBP2YOR124C BUD27P43573 796 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
UBP2YOR124C HEF3P53978 1044 aaKnown RBP2.56□□□□□ -2
UBP2YOR124C VPS72Q03388 795 aa2.56□□□□□ -2
UBP2YOR124C FKS3Q04952 1785 aa2.55□□□□□ -2
UBP2YOR124C FAS2P19097 1887 aaKnown RBP2.55□□□□□ -2
UBP2YOR124C RPS0BP46654 252 aaKnown RBP2.55□□□□□ -2
UBP2YOR124C VPS4P52917 437 aa2.55□□□□□ -2
UBP2YOR124C LYS2P07702 1392 aa2.55□□□□□ -2
UBP2YOR124C KIP3P53086 805 aaKnown RBP2.55□□□□□ -2
UBP2YOR124C EPS1P40557 701 aa2.55□□□□□ -2
UBP2YOR124C NOP58Q12499 511 aaKnown RBP2.55□□□□□ -2
UBP2YOR124C MSH1P25846 959 aa2.54□□□□□ -2
UBP2YOR124C YIL092WP40497 633 aa2.54□□□□□ -2
UBP2YOR124C YFR016CP43597 1233 aaKnown RBP2.54□□□□□ -2
UBP2YOR124C RRP46P53256 223 aaPredicted RBP2.54□□□□□ -2
UBP2YOR124C SPC110P32380 944 aa2.54□□□□□ -2
UBP2YOR124C BDF1P35817 686 aa2.54□□□□□ -2
UBP2YOR124C MNN4P36044 1178 aa2.54□□□□□ -2
UBP2YOR124C RKM3P38222 552 aa2.54□□□□□ -2
UBP2YOR124C IFH1P39520 1085 aa2.54□□□□□ -2
UBP2YOR124C SMC3P47037 1230 aa2.54□□□□□ -2
UBP2YOR124C PLP2Q12017 286 aa2.54□□□□□ -2
UBP2YOR124C KRI1P42846 591 aaKnown RBP2.53□□□□□ -2
UBP2YOR124C CIR1P42940 261 aa2.53□□□□□ -2
UBP2YOR124C ESL2P36168 1195 aa2.53□□□□□ -2
UBP2YOR124C MGA2P40578 1113 aa2.53□□□□□ -2
UBP2YOR124C NOP7P53261 605 aaKnown RBP2.53□□□□□ -2
UBP2YOR124C LEO1P38439 464 aa2.52□□□□□ -2.01
UBP2YOR124C MST1P07236 462 aa2.52□□□□□ -2.01
UBP2YOR124C ELM1P32801 640 aa2.52□□□□□ -2.01
UBP2YOR124C STU2P46675 888 aa2.52□□□□□ -2.01
UBP2YOR124C STE11P23561 717 aa2.52□□□□□ -2.01
UBP2YOR124C ARL1P38116 183 aaKnown RBP2.52□□□□□ -2.01
UBP2YOR124C PBY1P38254 753 aa2.52□□□□□ -2.01
UBP2YOR124C TCD1P38756 429 aa2.52□□□□□ -2.01
UBP2YOR124C RAD50P12753 1312 aa2.51□□□□□ -2.01
UBP2YOR124C SIC1P38634 284 aa2.51□□□□□ -2.01
UBP2YOR124C YJL171CP46992 396 aa2.51□□□□□ -2.01
UBP2YOR124C VPS70P47161 811 aa2.51□□□□□ -2.01
UBP2YOR124C RSF2P46974 1380 aa2.51□□□□□ -2.01
UBP2YOR124C CDC16P09798 840 aa2.51□□□□□ -2.01
UBP2YOR124C TRK1P12685 1235 aa2.51□□□□□ -2.01
UBP2YOR124C RAM2P29703 316 aa2.51□□□□□ -2.01
UBP2YOR124C PXL1P36166 706 aa2.51□□□□□ -2.01
UBP2YOR124C MED8P38304 223 aa2.51□□□□□ -2.01
UBP2YOR124C CEP3P40969 608 aa2.51□□□□□ -2.01
UBP2YOR124C POL32P47110 350 aa2.51□□□□□ -2.01
UBP2YOR124C LCD1Q04377 747 aa2.51□□□□□ -2.01
UBP2YOR124C MIF2P35201 549 aa2.5□□□□□ -2.01
UBP2YOR124C HST1P53685 503 aa2.5□□□□□ -2.01
UBP2YOR124C YDL144CQ07589 356 aa2.5□□□□□ -2.01
UBP2YOR124C SAP155P43612 1002 aa2.5□□□□□ -2.01
UBP2YOR124C PET111P08468 800 aa2.5□□□□□ -2.01
UBP2YOR124C NAP1P25293 417 aaKnown RBP2.5□□□□□ -2.01
UBP2YOR124C YAP3P38749 330 aa2.5□□□□□ -2.01
UBP2YOR124C MET10P39692 1035 aa2.5□□□□□ -2.01
UBP2YOR124C MRS2Q01926 470 aa2.5□□□□□ -2.01
UBP2YOR124C ECM16Q04217 1267 aaKnown RBP2.5□□□□□ -2.01
UBP2YOR124C TAP42Q04372 366 aa2.5□□□□□ -2.01
UBP2YOR124C BNI1P41832 1953 aa2.5□□□□□ -2.01
UBP2YOR124C SWI3P32591 825 aa2.49□□□□□ -2.01
UBP2YOR124C DMA2P53924 522 aa2.49□□□□□ -2.01
UBP2YOR124C YNL050CP53952 270 aa2.49□□□□□ -2.01
UBP2YOR124C THI22Q06490 572 aa2.49□□□□□ -2.01
UBP2YOR124C BUD21Q08492 214 aaPredicted RBP2.49□□□□□ -2.01
UBP2YOR124C TRL1P09880 827 aaKnown RBP2.49□□□□□ -2.01
UBP2YOR124C BMS1Q08965 1183 aaKnown RBP2.49□□□□□ -2.01
UBP2YOR124C KEX1P09620 729 aa2.49□□□□□ -2.01
UBP2YOR124C TAF13P11747 167 aa2.49□□□□□ -2.01
UBP2YOR124C SPB4P25808 606 aaPredicted RBP2.49□□□□□ -2.01
UBP2YOR124C VPS8P39702 1274 aa2.49□□□□□ -2.01
UBP2YOR124C ECM1P39715 212 aa2.49□□□□□ -2.01
UBP2YOR124C HOS3Q02959 697 aaKnown RBP2.49□□□□□ -2.01
UBP2YOR124C HRQ1Q05549 1077 aa2.49□□□□□ -2.01
UBP2YOR124C CCC2P38995 1004 aa2.48□□□□□ -2.01
UBP2YOR124C BBC1P47068 1157 aa2.48□□□□□ -2.01
UBP2YOR124C PRD1P25375 712 aa2.48□□□□□ -2.01
UBP2YOR124C RPN12P32496 274 aa2.48□□□□□ -2.01
UBP2YOR124C LTV1P34078 463 aa2.48□□□□□ -2.01
UBP2YOR124C SAC3P46674 1301 aa2.48□□□□□ -2.01
UBP2YOR124C MVP1P40959 511 aaKnown RBP2.48□□□□□ -2.01
UBP2YOR124C ITC1P53125 1264 aa2.48□□□□□ -2.01
UBP2YOR124C GCR2Q01722 534 aa2.48□□□□□ -2.01
UBP2YOR124C VPS60Q03390 229 aa2.48□□□□□ -2.01
UBP2YOR124C SML1Q04964 104 aa2.48□□□□□ -2.01
UBP2YOR124C ABP140Q08641 628 aaKnown RBP2.48□□□□□ -2.01
UBP2YOR124C ADE6P38972 1358 aaKnown RBP2.48□□□□□ -2.01
UBP2YOR124C SRS2P12954 1174 aa2.47□□□□□ -2.01
UBP2YOR124C DJP1P40564 432 aa2.47□□□□□ -2.01
UBP2YOR124C RIM15P43565 1770 aa2.47□□□□□ -2.01
UBP2YOR124C RAD16P31244 790 aa2.47□□□□□ -2.01
UBP2YOR124C RTG3P38165 486 aa2.47□□□□□ -2.01
UBP2YOR124C NMD2P38798 1089 aaKnown RBP2.47□□□□□ -2.01
UBP2YOR124C RPO41P13433 1351 aaKnown RBP2.47□□□□□ -2.01
UBP2YOR124C RAD2P07276 1031 aa2.47□□□□□ -2.01
UBP2YOR124C MBR1P23493 339 aa2.47□□□□□ -2.01
UBP2YOR124C ENV11P53246 860 aa2.47□□□□□ -2.01
UBP2YOR124C MCM2P29469 868 aa2.46□□□□□ -2.02
UBP2YOR124C GCD7P32502 381 aaPredicted RBP2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms