RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	YPP1	P46951	817 aa		5.35	□□□□□ -1.55
VAM10	YOR068C	SUB2	Q07478	446 aa	Known RBP	5.35	□□□□□ -1.55
VAM10	YOR068C	EMP47	P43555	445 aa		5.33	□□□□□ -1.56
VAM10	YOR068C	FRA1	Q07825	749 aa		5.33	□□□□□ -1.56
VAM10	YOR068C	SSA4	P22202	642 aa	Known RBP	5.32	□□□□□ -1.56
VAM10	YOR068C	VAC17	P25591	423 aa		5.32	□□□□□ -1.56
VAM10	YOR068C	MRF1	P30775	413 aa	Predicted RBP	5.32	□□□□□ -1.56
VAM10	YOR068C	GUT2	P32191	649 aa		5.32	□□□□□ -1.56
VAM10	YOR068C	CST6	P40535	587 aa		5.32	□□□□□ -1.56
VAM10	YOR068C	BDP1	P46678	594 aa		5.32	□□□□□ -1.56
VAM10	YOR068C	PEP12	P32854	288 aa		5.31	□□□□□ -1.56
VAM10	YOR068C	STE20	Q03497	939 aa	Known RBP	5.31	□□□□□ -1.56
VAM10	YOR068C	SIS2	P36024	562 aa		5.3	□□□□□ -1.56
VAM10	YOR068C	ITT1	Q04638	464 aa		5.3	□□□□□ -1.56
VAM10	YOR068C	PUS5	Q06244	254 aa		5.3	□□□□□ -1.56
VAM10	YOR068C	XDJ1	P39102	459 aa		5.29	□□□□□ -1.56
VAM10	YOR068C	APL6	P46682	809 aa		5.29	□□□□□ -1.56
VAM10	YOR068C	FRK1	Q03002	865 aa	Predicted RBP	5.29	□□□□□ -1.56
VAM10	YOR068C	NOB1	Q08444	459 aa	Known RBP	5.29	□□□□□ -1.56
VAM10	YOR068C	SSA1	P10591	642 aa	Known RBP	5.28	□□□□□ -1.56
VAM10	YOR068C	PUP1	P25043	261 aa		5.28	□□□□□ -1.56
VAM10	YOR068C	MRX12	P47084	519 aa		5.28	□□□□□ -1.56
VAM10	YOR068C	YEL077C	Q3E7X8	1277 aa		5.28	□□□□□ -1.56
VAM10	YOR068C	TGL4	P36165	910 aa		5.27	□□□□□ -1.57
VAM10	YOR068C	YML083C	Q04526	418 aa		5.27	□□□□□ -1.57
VAM10	YOR068C	IXR1	P33417	597 aa		5.26	□□□□□ -1.57
VAM10	YOR068C	KTR7	P40504	517 aa		5.26	□□□□□ -1.57
VAM10	YOR068C	ENV9	Q08651	330 aa		5.26	□□□□□ -1.57
VAM10	YOR068C	KIP2	P28743	706 aa		5.25	□□□□□ -1.57
VAM10	YOR068C	SOH1	P38633	127 aa		5.25	□□□□□ -1.57
VAM10	YOR068C	AMS1	P22855	1083 aa		5.24	□□□□□ -1.57
VAM10	YOR068C	GEF1	P37020	779 aa		5.24	□□□□□ -1.57
VAM10	YOR068C	ATG3	P40344	310 aa		5.24	□□□□□ -1.57
VAM10	YOR068C	SYH1	Q02875	849 aa	Known RBP	5.24	□□□□□ -1.57
VAM10	YOR068C	UTP13	Q05946	817 aa	Known RBP	5.24	□□□□□ -1.57
VAM10	YOR068C	HAL5	P38970	855 aa	Known RBP	5.23	□□□□□ -1.57
VAM10	YOR068C	RAS1	P01119	309 aa		5.22	□□□□□ -1.57
VAM10	YOR068C	EMW1	P42842	904 aa	Known RBP	5.22	□□□□□ -1.57
VAM10	YOR068C	CLA4	P48562	842 aa		5.22	□□□□□ -1.57
VAM10	YOR068C	APP1	P53933	587 aa		5.22	□□□□□ -1.57
VAM10	YOR068C	ECM23	Q02710	187 aa		5.22	□□□□□ -1.57
VAM10	YOR068C	ISR1	Q06098	443 aa	Known RBP	5.22	□□□□□ -1.57
VAM10	YOR068C	GAL2	P13181	574 aa		5.21	□□□□□ -1.58
VAM10	YOR068C	ATG20	Q07528	640 aa		5.2	□□□□□ -1.58
VAM10	YOR068C	PHO87	P25360	923 aa		5.19	□□□□□ -1.58
VAM10	YOR068C	MRT4	P33201	236 aa	Known RBP	5.19	□□□□□ -1.58
VAM10	YOR068C	HED1	Q03937	162 aa		5.19	□□□□□ -1.58
VAM10	YOR068C	MIP1	P15801	1254 aa		5.18	□□□□□ -1.58
VAM10	YOR068C	UBX7	P38349	436 aa		5.18	□□□□□ -1.58
VAM10	YOR068C	ACS2	P52910	683 aa	Known RBP	5.18	□□□□□ -1.58
VAM10	YOR068C	RPL34A	P87262	121 aa	Predicted RBP	5.18	□□□□□ -1.58
VAM10	YOR068C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
VAM10	YOR068C	MET32	Q12041	191 aa		5.18	□□□□□ -1.58
VAM10	YOR068C	MKS1	P34072	584 aa		5.17	□□□□□ -1.58
VAM10	YOR068C	PDI1	P17967	522 aa	Known RBP	5.16	□□□□□ -1.58
VAM10	YOR068C	FBP26	P32604	452 aa		5.16	□□□□□ -1.58
VAM10	YOR068C	YBL086C	P38177	466 aa		5.16	□□□□□ -1.58
VAM10	YOR068C	AIR1	P40507	360 aa	Known RBP	5.16	□□□□□ -1.58
VAM10	YOR068C	ROM1	P53046	1155 aa		5.16	□□□□□ -1.58
VAM10	YOR068C	HDA3	Q06623	655 aa		5.16	□□□□□ -1.58
VAM10	YOR068C	TSC13	Q99190	310 aa		5.16	□□□□□ -1.58
VAM10	YOR068C	DPS1	P04802	557 aa	Known RBP	5.15	□□□□□ -1.59
VAM10	YOR068C	HAP4	P14064	554 aa		5.15	□□□□□ -1.59
VAM10	YOR068C	AIM9	P40053	627 aa	Known RBP	5.15	□□□□□ -1.59
VAM10	YOR068C	ISU1	Q03020	165 aa		5.15	□□□□□ -1.59
VAM10	YOR068C	UTR2	P32623	467 aa		5.14	□□□□□ -1.59
VAM10	YOR068C	DFG5	Q05031	458 aa		5.14	□□□□□ -1.59
VAM10	YOR068C	GAS4	Q08271	471 aa		5.14	□□□□□ -1.59
VAM10	YOR068C	SPT2	P06843	333 aa	Predicted RBP	5.13	□□□□□ -1.59
VAM10	YOR068C	CDC4	P07834	779 aa		5.13	□□□□□ -1.59
VAM10	YOR068C	STE6	P12866	1290 aa		5.13	□□□□□ -1.59
VAM10	YOR068C	CDC3	P32457	520 aa	Known RBP	5.13	□□□□□ -1.59
VAM10	YOR068C	TPS3	P38426	1054 aa	Known RBP	5.13	□□□□□ -1.59
VAM10	YOR068C	YFL034W	P43564	1073 aa		5.13	□□□□□ -1.59
VAM10	YOR068C	SLX8	P40072	274 aa		5.12	□□□□□ -1.59
VAM10	YOR068C	YML020W	Q03722	664 aa		5.12	□□□□□ -1.59
VAM10	YOR068C	RPS6A	P0CX37	236 aa	Known RBP	5.11	□□□□□ -1.59
VAM10	YOR068C	RPS6B	P0CX38	236 aa	Predicted RBP	5.11	□□□□□ -1.59
VAM10	YOR068C	NTH2	P35172	780 aa		5.11	□□□□□ -1.59
VAM10	YOR068C	CWC15	Q03772	175 aa	Known RBP	5.11	□□□□□ -1.59
VAM10	YOR068C	SWI5	P08153	709 aa		5.1	□□□□□ -1.59
VAM10	YOR068C	BDS1	Q08347	646 aa		5.1	□□□□□ -1.59
VAM10	YOR068C	WTM2	Q12206	467 aa		5.1	□□□□□ -1.59
VAM10	YOR068C	DAT1	P13483	248 aa	Known RBP	5.09	□□□□□ -1.59
VAM10	YOR068C	AFT1	P22149	690 aa		5.09	□□□□□ -1.59
VAM10	YOR068C	UBP1	P25037	809 aa		5.09	□□□□□ -1.59
VAM10	YOR068C	ASH1	P34233	588 aa		5.09	□□□□□ -1.59
VAM10	YOR068C	MSB3	P48566	633 aa	Predicted RBP	5.09	□□□□□ -1.59
VAM10	YOR068C	PUF6	Q04373	656 aa	Known RBP	5.09	□□□□□ -1.59
VAM10	YOR068C	NOP8	Q08287	484 aa	Predicted RBP	5.09	□□□□□ -1.59
VAM10	YOR068C	CYT1	P07143	309 aa		5.08	□□□□□ -1.6
VAM10	YOR068C	VAN1	P23642	535 aa		5.08	□□□□□ -1.6
VAM10	YOR068C	TBS1	P38114	1094 aa		5.08	□□□□□ -1.6
VAM10	YOR068C	UGA3	P26370	528 aa		5.07	□□□□□ -1.6
VAM10	YOR068C	SUV3	P32580	737 aa		5.07	□□□□□ -1.6
VAM10	YOR068C	SSF1	P38789	453 aa	Predicted RBP	5.07	□□□□□ -1.6
VAM10	YOR068C	RTT106	P40161	455 aa		5.07	□□□□□ -1.6
VAM10	YOR068C	HST3	P53687	447 aa		5.07	□□□□□ -1.6
VAM10	YOR068C	HAT1	Q12341	374 aa		5.07	□□□□□ -1.6
VAM10	YOR068C	RPP2B	P02400	110 aa	Known RBP	5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 71.8 ms