RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W LAM6Q08001 693 aa18.35■□□□□ 0.53
SHR5YOL110W RPN11P43588 306 aaKnown RBP18.33■□□□□ 0.52
SHR5YOL110W SAP155P43612 1002 aa18.33■□□□□ 0.52
SHR5YOL110W EDE1P34216 1381 aa18.32■□□□□ 0.52
SHR5YOL110W SUI2P20459 304 aaKnown RBP18.32■□□□□ 0.52
SHR5YOL110W TPD3P31383 635 aa18.32■□□□□ 0.52
SHR5YOL110W RTT109Q07794 436 aa18.32■□□□□ 0.52
SHR5YOL110W OSM1P21375 501 aaKnown RBP18.31■□□□□ 0.52
SHR5YOL110W YJL181WP46987 611 aa18.31■□□□□ 0.52
SHR5YOL110W KCC4P25389 1037 aa18.3■□□□□ 0.52
SHR5YOL110W PRP40P33203 583 aaKnown RBP18.3■□□□□ 0.52
SHR5YOL110W YKR075CP36155 307 aa18.29■□□□□ 0.52
SHR5YOL110W HEF3P53978 1044 aaKnown RBP18.29■□□□□ 0.52
SHR5YOL110W ZDS1P50111 915 aaKnown RBP18.28■□□□□ 0.52
SHR5YOL110W UBP1P25037 809 aa18.27■□□□□ 0.52
SHR5YOL110W MAM1P40065 302 aa18.27■□□□□ 0.52
SHR5YOL110W BUD31P25337 157 aaPredicted RBP18.26■□□□□ 0.51
SHR5YOL110W UGA3P26370 528 aa18.26■□□□□ 0.51
SHR5YOL110W RVB2Q12464 471 aaKnown RBP18.26■□□□□ 0.51
SHR5YOL110W YBP2P53169 641 aa18.24■□□□□ 0.51
SHR5YOL110W NSE3Q05541 303 aa18.24■□□□□ 0.51
SHR5YOL110W GYP7P48365 746 aa18.23■□□□□ 0.51
SHR5YOL110W YRB30P53107 440 aaPredicted RBP18.23■□□□□ 0.51
SHR5YOL110W RIM15P43565 1770 aa18.22■□□□□ 0.51
SHR5YOL110W RRT14P40470 206 aa18.22■□□□□ 0.51
SHR5YOL110W ALE1Q08548 619 aa18.19■□□□□ 0.5
SHR5YOL110W GRX1P25373 110 aaKnown RBP18.17■□□□□ 0.5
SHR5YOL110W NPR2P39923 615 aa18.17■□□□□ 0.5
SHR5YOL110W RMT2Q03305 412 aa18.17■□□□□ 0.5
SHR5YOL110W BMS1Q08965 1183 aaKnown RBP18.17■□□□□ 0.5
SHR5YOL110W LYS2P07702 1392 aa18.17■□□□□ 0.5
SHR5YOL110W YBR287WP38355 427 aa18.15■□□□□ 0.5
SHR5YOL110W COQ4O13525 335 aa18.13■□□□□ 0.49
SHR5YOL110W MSB4Q12317 492 aa18.12■□□□□ 0.49
SHR5YOL110W YFR016CP43597 1233 aaKnown RBP18.11■□□□□ 0.49
SHR5YOL110W NAB6Q03735 1134 aaKnown RBP RIP-Chip data18.11■□□□□ 0.49not detected
SHR5YOL110W PRI1P10363 409 aa18.1■□□□□ 0.49
SHR5YOL110W MAK21Q12176 1025 aaKnown RBP18.1■□□□□ 0.49
SHR5YOL110W SRT1Q03175 343 aa18.09■□□□□ 0.49
SHR5YOL110W TUM1Q08686 304 aaKnown RBP18.08■□□□□ 0.48
SHR5YOL110W NOP53Q12080 455 aaKnown RBP18.07■□□□□ 0.48
SHR5YOL110W RAD4P14736 754 aa18.06■□□□□ 0.48
SHR5YOL110W LYS4P49367 693 aaPredicted RBP18.06■□□□□ 0.48
SHR5YOL110W FUN12P39730 1002 aaKnown RBP18.05■□□□□ 0.48
SHR5YOL110W YOL057WQ08225 711 aa18.04■□□□□ 0.48
SHR5YOL110W MDG1P53885 366 aa18.03■□□□□ 0.48
SHR5YOL110W GRE2Q12068 342 aaKnown RBP18.03■□□□□ 0.48
SHR5YOL110W RAD2P07276 1031 aa18.02■□□□□ 0.48
SHR5YOL110W SSP2Q08646 371 aa18.02■□□□□ 0.48
SHR5YOL110W DAL5P15365 543 aa18■□□□□ 0.47
SHR5YOL110W YIL092WP40497 633 aa17.99■□□□□ 0.47
SHR5YOL110W BUD27P43573 796 aaKnown RBP RIP-Chip data17.98■□□□□ 0.47not detected
SHR5YOL110W ALD2P47771 506 aa17.97■□□□□ 0.47
SHR5YOL110W ZDS2P54786 942 aa17.97■□□□□ 0.47
SHR5YOL110W BUG1Q12191 341 aa17.97■□□□□ 0.47
SHR5YOL110W PHM7Q12252 991 aa17.97■□□□□ 0.47
SHR5YOL110W BDF1P35817 686 aa17.96■□□□□ 0.47
SHR5YOL110W YBL086CP38177 466 aa17.96■□□□□ 0.47
SHR5YOL110W GTT3P39996 337 aa17.95■□□□□ 0.46
SHR5YOL110W TEA1P47988 759 aa17.95■□□□□ 0.46
SHR5YOL110W MRP7P12687 371 aa17.93■□□□□ 0.46
SHR5YOL110W YPP1P46951 817 aa17.93■□□□□ 0.46
SHR5YOL110W CTH1P47976 325 aa17.93■□□□□ 0.46
SHR5YOL110W DNM1P54861 757 aa17.93■□□□□ 0.46
SHR5YOL110W VPS64Q03944 604 aa17.93■□□□□ 0.46
SHR5YOL110W UGA2P38067 497 aa17.91■□□□□ 0.46
SHR5YOL110W NOP8Q08287 484 aaPredicted RBP17.91■□□□□ 0.46
SHR5YOL110W SSA2P10592 639 aaKnown RBP17.9■□□□□ 0.46
SHR5YOL110W YDR306CQ06640 478 aa17.9■□□□□ 0.46
SHR5YOL110W SER1P33330 395 aaKnown RBP17.89■□□□□ 0.45
SHR5YOL110W TFA1P36100 482 aa17.89■□□□□ 0.45
SHR5YOL110W NYV1Q12255 253 aa17.89■□□□□ 0.45
SHR5YOL110W APL2P36000 726 aaPredicted RBP17.88■□□□□ 0.45
SHR5YOL110W RPG1P38249 964 aaKnown RBP17.88■□□□□ 0.45
SHR5YOL110W CST6P40535 587 aa17.88■□□□□ 0.45
SHR5YOL110W UTP22P53254 1237 aaPredicted RBP17.88■□□□□ 0.45
SHR5YOL110W UTP10P42945 1769 aaKnown RBP17.87■□□□□ 0.45
SHR5YOL110W YGL082WP53155 381 aa17.87■□□□□ 0.45
SHR5YOL110W ALD3P54114 506 aa17.87■□□□□ 0.45
SHR5YOL110W NUP133P36161 1157 aa17.86■□□□□ 0.45
SHR5YOL110W CSI1Q04368 295 aa17.86■□□□□ 0.45
SHR5YOL110W YPR204WQ08995 1032 aa17.86■□□□□ 0.45
SHR5YOL110W SWI1P09547 1314 aa17.85■□□□□ 0.45
SHR5YOL110W ARG8P18544 423 aa17.85■□□□□ 0.45
SHR5YOL110W FPR3P38911 411 aaKnown RBP17.85■□□□□ 0.45
SHR5YOL110W RAD24P32641 659 aa17.84■□□□□ 0.45
SHR5YOL110W TRP5P00931 707 aaKnown RBP17.83■□□□□ 0.44
SHR5YOL110W YGR122WP53272 402 aa17.83■□□□□ 0.44
SHR5YOL110W RPS19AP07280 144 aaKnown RBP17.81■□□□□ 0.44
SHR5YOL110W RPS19BP07281 144 aaPredicted RBP17.81■□□□□ 0.44
SHR5YOL110W YJR008WP47085 338 aa17.81■□□□□ 0.44
SHR5YOL110W PKH1Q03407 766 aa17.81■□□□□ 0.44
SHR5YOL110W YLR271WQ06152 274 aa17.81■□□□□ 0.44
SHR5YOL110W POL32P47110 350 aa17.8■□□□□ 0.44
SHR5YOL110W DCD1P06773 312 aa17.79■□□□□ 0.44
SHR5YOL110W HPC2Q01448 625 aa17.78■□□□□ 0.44
SHR5YOL110W SWC3P31376 625 aa17.77■□□□□ 0.44
SHR5YOL110W PUF6Q04373 656 aaKnown RBP17.77■□□□□ 0.44
SHR5YOL110W LPD1P09624 499 aaKnown RBP17.76■□□□□ 0.43
SHR5YOL110W TOS1P38288 455 aa17.76■□□□□ 0.43
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms