RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeastyeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCL1YOL010W SPT16P32558 1035 aaKnown RBP8.33□□□□□ -1.08
RCL1YOL010W TY1A-JR2P47099 440 aa8.33□□□□□ -1.08
RCL1YOL010W FRK1Q03002 865 aaPredicted RBP8.33□□□□□ -1.08
RCL1YOL010W TY1A-DR1Q03856 440 aa8.33□□□□□ -1.08
RCL1YOL010W TY1A-ML1Q04706 440 aaKnown RBP8.33□□□□□ -1.08
RCL1YOL010W TY1A-BRQ12217 440 aa8.33□□□□□ -1.08
RCL1YOL010W TY1A-NL2Q12470 440 aa8.33□□□□□ -1.08
RCL1YOL010W TY1A-GR2Q12485 440 aa8.33□□□□□ -1.08
RCL1YOL010W DOP1Q03921 1698 aa8.32□□□□□ -1.08
RCL1YOL010W SPO14P36126 1683 aa8.31□□□□□ -1.08
RCL1YOL010W TSC11P40061 1430 aa8.31□□□□□ -1.08
RCL1YOL010W VTH1P40438 1549 aa8.31□□□□□ -1.08
RCL1YOL010W VTH2P40890 1549 aa8.31□□□□□ -1.08
RCL1YOL010W SEC2P17065 759 aa8.3□□□□□ -1.08
RCL1YOL010W SMC4Q12267 1418 aa8.29□□□□□ -1.08
RCL1YOL010W IFH1P39520 1085 aa8.29□□□□□ -1.08
RCL1YOL010W ORC6P38826 435 aa8.28□□□□□ -1.08
RCL1YOL010W ULS1Q08562 1619 aa8.26□□□□□ -1.09
RCL1YOL010W CDC4P07834 779 aa8.26□□□□□ -1.09
RCL1YOL010W RRN7P40992 514 aa8.26□□□□□ -1.09
RCL1YOL010W REF2P42073 533 aaPredicted RBP8.26□□□□□ -1.09
RCL1YOL010W BDP1P46678 594 aa8.26□□□□□ -1.09
RCL1YOL010W SNT2P53127 1403 aa8.26□□□□□ -1.09
RCL1YOL010W POL1P13382 1468 aa8.26□□□□□ -1.09
RCL1YOL010W YOR1P53049 1477 aa8.26□□□□□ -1.09
RCL1YOL010W MET22P32179 357 aa8.22□□□□□ -1.09
RCL1YOL010W MYO4P32492 1471 aa8.2□□□□□ -1.1
RCL1YOL010W MET10P39692 1035 aa8.2□□□□□ -1.1
RCL1YOL010W MVP1P40959 511 aaKnown RBP8.2□□□□□ -1.1
RCL1YOL010W TRM3Q07527 1436 aa8.2□□□□□ -1.1
RCL1YOL010W PAT1P25644 796 aaKnown RBP8.19□□□□□ -1.1
RCL1YOL010W ENV9Q08651 330 aa8.18□□□□□ -1.1
RCL1YOL010W HED1Q03937 162 aa8.17□□□□□ -1.1
RCL1YOL010W YPR109WQ06104 294 aa8.17□□□□□ -1.1
RCL1YOL010W STU1P38198 1513 aa8.17□□□□□ -1.1
RCL1YOL010W PDR10P51533 1564 aa8.16□□□□□ -1.1
RCL1YOL010W YPR148CQ06523 435 aa8.16□□□□□ -1.1
RCL1YOL010W SNQ2P32568 1501 aaKnown RBP8.15□□□□□ -1.1
RCL1YOL010W YDR444WQ04093 687 aa8.13□□□□□ -1.11
RCL1YOL010W IQG1Q12280 1495 aa8.13□□□□□ -1.11
RCL1YOL010W DNF3Q12674 1656 aa8.12□□□□□ -1.11
RCL1YOL010W KEX2P13134 814 aa8.12□□□□□ -1.11
RCL1YOL010W PDR15Q04182 1529 aaKnown RBP8.12□□□□□ -1.11
RCL1YOL010W COX6P00427 148 aa8.11□□□□□ -1.11
RCL1YOL010W RGR1P19263 1082 aa8.11□□□□□ -1.11
RCL1YOL010W PDR12Q02785 1511 aa8.1□□□□□ -1.11
RCL1YOL010W GDB1Q06625 1536 aa8.1□□□□□ -1.11
RCL1YOL010W ERF2Q06551 359 aa8.1□□□□□ -1.11
RCL1YOL010W MAK21Q12176 1025 aaKnown RBP8.09□□□□□ -1.11
RCL1YOL010W ARO1P08566 1588 aaKnown RBP8.09□□□□□ -1.11
RCL1YOL010W VPS70P47161 811 aa8.08□□□□□ -1.12
RCL1YOL010W ASH1P34233 588 aa8.07□□□□□ -1.12
RCL1YOL010W MET32Q12041 191 aa8.07□□□□□ -1.12
RCL1YOL010W PAC1P39946 494 aaKnown RBP8.05□□□□□ -1.12
RCL1YOL010W YTA7P40340 1379 aa8.05□□□□□ -1.12
RCL1YOL010W RTT106P40161 455 aa8.04□□□□□ -1.12
RCL1YOL010W LCB5Q06147 687 aaKnown RBP8.04□□□□□ -1.12
RCL1YOL010W NUP157P40064 1391 aaKnown RBP8.03□□□□□ -1.12
RCL1YOL010W HST3P53687 447 aa8.03□□□□□ -1.12
RCL1YOL010W YDL176WQ12027 708 aa8.03□□□□□ -1.12
RCL1YOL010W BUD3P25558 1636 aa8.03□□□□□ -1.12
RCL1YOL010W CHC1P22137 1653 aaKnown RBP8.02□□□□□ -1.13
RCL1YOL010W AFT1P22149 690 aa8.02□□□□□ -1.13
RCL1YOL010W PUS5Q06244 254 aa8.02□□□□□ -1.13
RCL1YOL010W STH1P32597 1359 aa8□□□□□ -1.13
RCL1YOL010W MOD5P07884 428 aa8□□□□□ -1.13
RCL1YOL010W MLP2P40457 1679 aa7.98□□□□□ -1.13
RCL1YOL010W YAP3P38749 330 aa7.96□□□□□ -1.14
RCL1YOL010W RRD1P40454 393 aaKnown RBP7.96□□□□□ -1.14
RCL1YOL010W TUB4P53378 473 aa7.96□□□□□ -1.14
RCL1YOL010W MAK10Q02197 733 aa7.96□□□□□ -1.14
RCL1YOL010W AGE1Q04412 482 aa7.96□□□□□ -1.14
RCL1YOL010W USO1P25386 1790 aa7.94□□□□□ -1.14
RCL1YOL010W YJR115WP47152 169 aa7.94□□□□□ -1.14
RCL1YOL010W BNR1P40450 1375 aa7.93□□□□□ -1.14
RCL1YOL010W TY3B-GQ99315 1547 aa7.92□□□□□ -1.14
RCL1YOL010W GLN1P32288 370 aaKnown RBP7.89□□□□□ -1.15
RCL1YOL010W YSP2Q06681 1438 aa7.88□□□□□ -1.15
RCL1YOL010W PSE1P32337 1089 aaKnown RBP7.88□□□□□ -1.15
RCL1YOL010W CLB5P30283 435 aa7.85□□□□□ -1.15
RCL1YOL010W RTF1P53064 558 aa7.84□□□□□ -1.15
RCL1YOL010W CAF120P53836 1060 aa7.84□□□□□ -1.15
RCL1YOL010W YNL115CP53925 644 aa7.84□□□□□ -1.15
RCL1YOL010W THI12P42883 340 aa7.83□□□□□ -1.16
RCL1YOL010W THI5P43534 340 aa7.83□□□□□ -1.16
RCL1YOL010W THI11P47183 340 aa7.83□□□□□ -1.16
RCL1YOL010W THI13Q07748 340 aa7.83□□□□□ -1.16
RCL1YOL010W PBS2P08018 668 aa7.82□□□□□ -1.16
RCL1YOL010W MSB3P48566 633 aaPredicted RBP7.82□□□□□ -1.16
RCL1YOL010W KXD1P53158 218 aa7.81□□□□□ -1.16
RCL1YOL010W SYH1Q02875 849 aaKnown RBP7.79□□□□□ -1.16
RCL1YOL010W SEC7P11075 2009 aaKnown RBP7.78□□□□□ -1.16
RCL1YOL010W YMR196WQ04336 1088 aa7.78□□□□□ -1.16
RCL1YOL010W TPD3P31383 635 aa7.77□□□□□ -1.17
RCL1YOL010W HXT10P43581 546 aa7.77□□□□□ -1.17
RCL1YOL010W UGA3P26370 528 aa7.76□□□□□ -1.17
RCL1YOL010W ACO2P39533 789 aa7.76□□□□□ -1.17
RCL1YOL010W OPT2Q06593 877 aa7.76□□□□□ -1.17
RCL1YOL010W PTK2P47116 818 aaKnown RBP7.75□□□□□ -1.17
RCL1YOL010W MTC5Q03897 1148 aa7.75□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms