RNA–Protein interactions for RNA: YNL308C

KRI1, Transcript of Essential nucleolar protein required for 40S ribosome biogenesis, yeast

Gene KRI1, Length 1,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRI1	YNL308C	MCM16	Q12262	181 aa		4.77	□□□□□ -1.65
KRI1	YNL308C	CPS1	P27614	576 aa		4.76	□□□□□ -1.65
KRI1	YNL308C	YPP1	P46951	817 aa		4.76	□□□□□ -1.65
KRI1	YNL308C	RIM21	P48565	533 aa		4.76	□□□□□ -1.65
KRI1	YNL308C	TEC1	P18412	486 aa		4.76	□□□□□ -1.65
KRI1	YNL308C	TTI1	P36097	1038 aa		4.76	□□□□□ -1.65
KRI1	YNL308C	ENP1	P38333	483 aa	Known RBP	4.76	□□□□□ -1.65
KRI1	YNL308C	CWC22	P53333	577 aa	Known RBP	4.76	□□□□□ -1.65
KRI1	YNL308C	MRX10	Q05648	414 aa		4.76	□□□□□ -1.65
KRI1	YNL308C	MOD5	P07884	428 aa		4.75	□□□□□ -1.65
KRI1	YNL308C	SSA4	P22202	642 aa	Known RBP	4.75	□□□□□ -1.65
KRI1	YNL308C	MRF1	P30775	413 aa	Predicted RBP	4.75	□□□□□ -1.65
KRI1	YNL308C	ISF1	P32488	338 aa		4.75	□□□□□ -1.65
KRI1	YNL308C	BCK2	P33306	851 aa		4.75	□□□□□ -1.65
KRI1	YNL308C	FIG4	P42837	879 aa		4.75	□□□□□ -1.65
KRI1	YNL308C	SUB2	Q07478	446 aa	Known RBP	4.75	□□□□□ -1.65
KRI1	YNL308C	TPD3	P31383	635 aa		4.74	□□□□□ -1.65
KRI1	YNL308C	RRD1	P40454	393 aa	Known RBP	4.74	□□□□□ -1.65
KRI1	YNL308C	EMP47	P43555	445 aa		4.74	□□□□□ -1.65
KRI1	YNL308C	TCB2	P48231	1178 aa		4.74	□□□□□ -1.65
KRI1	YNL308C	GUT2	P32191	649 aa		4.73	□□□□□ -1.65
KRI1	YNL308C	RPS0B	P46654	252 aa	Known RBP	4.73	□□□□□ -1.65
KRI1	YNL308C	STE20	Q03497	939 aa	Known RBP	4.73	□□□□□ -1.65
KRI1	YNL308C	SDH2	P21801	266 aa		4.72	□□□□□ -1.65
KRI1	YNL308C	YPR084W	Q06821	456 aa		4.72	□□□□□ -1.65
KRI1	YNL308C	FRA1	Q07825	749 aa		4.72	□□□□□ -1.65
KRI1	YNL308C	UFD4	P33202	1483 aa		4.72	□□□□□ -1.65
KRI1	YNL308C	MMS22	Q06164	1454 aa		4.72	□□□□□ -1.65
KRI1	YNL308C	VAC17	P25591	423 aa		4.71	□□□□□ -1.66
KRI1	YNL308C	STH1	P32597	1359 aa		4.71	□□□□□ -1.66
KRI1	YNL308C	SSA1	P10591	642 aa	Known RBP	4.7	□□□□□ -1.66
KRI1	YNL308C	RDS2	P19541	446 aa	Known RBP	4.7	□□□□□ -1.66
KRI1	YNL308C	BDP1	P46678	594 aa		4.7	□□□□□ -1.66
KRI1	YNL308C	ENV9	Q08651	330 aa		4.7	□□□□□ -1.66
KRI1	YNL308C	MRX12	P47084	519 aa		4.7	□□□□□ -1.66
KRI1	YNL308C	FRK1	Q03002	865 aa	Predicted RBP	4.7	□□□□□ -1.66
KRI1	YNL308C	PUS5	Q06244	254 aa		4.7	□□□□□ -1.66
KRI1	YNL308C	PEP12	P32854	288 aa		4.69	□□□□□ -1.66
KRI1	YNL308C	XDJ1	P39102	459 aa		4.69	□□□□□ -1.66
KRI1	YNL308C	CST6	P40535	587 aa		4.69	□□□□□ -1.66
KRI1	YNL308C	YML020W	Q03722	664 aa		4.69	□□□□□ -1.66
KRI1	YNL308C	SEC3	P33332	1336 aa	Known RBP	4.69	□□□□□ -1.66
KRI1	YNL308C	KIP2	P28743	706 aa		4.68	□□□□□ -1.66
KRI1	YNL308C	TGL4	P36165	910 aa		4.68	□□□□□ -1.66
KRI1	YNL308C	ATG3	P40344	310 aa		4.68	□□□□□ -1.66
KRI1	YNL308C	KTR7	P40504	517 aa		4.68	□□□□□ -1.66
KRI1	YNL308C	ITT1	Q04638	464 aa		4.68	□□□□□ -1.66
KRI1	YNL308C	NOB1	Q08444	459 aa	Known RBP	4.68	□□□□□ -1.66
KRI1	YNL308C	YEL077C	Q3E7X8	1277 aa		4.68	□□□□□ -1.66
KRI1	YNL308C	CHD1	P32657	1468 aa		4.68	□□□□□ -1.66
KRI1	YNL308C	PUP1	P25043	261 aa		4.68	□□□□□ -1.66
KRI1	YNL308C	IME2	P32581	645 aa		4.68	□□□□□ -1.66
KRI1	YNL308C	IXR1	P33417	597 aa		4.68	□□□□□ -1.66
KRI1	YNL308C	XRN1	P22147	1528 aa	Known RBP	4.67	□□□□□ -1.66
KRI1	YNL308C	NAP1	P25293	417 aa	Known RBP	4.67	□□□□□ -1.66
KRI1	YNL308C	GEF1	P37020	779 aa		4.67	□□□□□ -1.66
KRI1	YNL308C	SYH1	Q02875	849 aa	Known RBP	4.67	□□□□□ -1.66
KRI1	YNL308C	CLC1	P17891	233 aa		4.66	□□□□□ -1.66
KRI1	YNL308C	PRS1	P32895	427 aa	Known RBP	4.66	□□□□□ -1.66
KRI1	YNL308C	SOH1	P38633	127 aa		4.66	□□□□□ -1.66
KRI1	YNL308C	SLX8	P40072	274 aa		4.66	□□□□□ -1.66
KRI1	YNL308C	APL6	P46682	809 aa		4.66	□□□□□ -1.66
KRI1	YNL308C	YML083C	Q04526	418 aa		4.66	□□□□□ -1.66
KRI1	YNL308C	NOP8	Q08287	484 aa	Predicted RBP	4.66	□□□□□ -1.66
KRI1	YNL308C	SPT7	P35177	1332 aa		4.66	□□□□□ -1.66
KRI1	YNL308C	KRI1	P42846	591 aa	Known RBP	4.65	□□□□□ -1.66
KRI1	YNL308C	UTP13	Q05946	817 aa	Known RBP	4.65	□□□□□ -1.66
KRI1	YNL308C	ENV11	P53246	860 aa		4.65	□□□□□ -1.67
KRI1	YNL308C	DNA2	P38859	1522 aa		4.64	□□□□□ -1.67
KRI1	YNL308C	AMS1	P22855	1083 aa		4.64	□□□□□ -1.67
KRI1	YNL308C	APP1	P53933	587 aa		4.64	□□□□□ -1.67
KRI1	YNL308C	RPL34A	P87262	121 aa	Predicted RBP	4.64	□□□□□ -1.67
KRI1	YNL308C	ECM23	Q02710	187 aa		4.64	□□□□□ -1.67
KRI1	YNL308C	ISR1	Q06098	443 aa	Known RBP	4.63	□□□□□ -1.67
KRI1	YNL308C	GAL2	P13181	574 aa		4.63	□□□□□ -1.67
KRI1	YNL308C	ATG20	Q07528	640 aa		4.63	□□□□□ -1.67
KRI1	YNL308C	KOG1	P38873	1557 aa		4.62	□□□□□ -1.67
KRI1	YNL308C	ECM5	Q03214	1411 aa		4.62	□□□□□ -1.67
KRI1	YNL308C	EMW1	P42842	904 aa	Known RBP	4.62	□□□□□ -1.67
KRI1	YNL308C	CFT1	Q06632	1357 aa	Known RBP	4.62	□□□□□ -1.67
KRI1	YNL308C	RAS1	P01119	309 aa		4.61	□□□□□ -1.67
KRI1	YNL308C	OPY1	P38271	328 aa		4.61	□□□□□ -1.67
KRI1	YNL308C	HAL5	P38970	855 aa	Known RBP	4.61	□□□□□ -1.67
KRI1	YNL308C	ORC1	P54784	914 aa	Predicted RBP	4.61	□□□□□ -1.67
KRI1	YNL308C	TRM732	Q03496	1420 aa		4.61	□□□□□ -1.67
KRI1	YNL308C	PHO87	P25360	923 aa		4.6	□□□□□ -1.67
KRI1	YNL308C	UBX7	P38349	436 aa		4.6	□□□□□ -1.67
KRI1	YNL308C	YGR130C	P53278	816 aa		4.6	□□□□□ -1.67
KRI1	YNL308C	HED1	Q03937	162 aa		4.6	□□□□□ -1.67
KRI1	YNL308C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
KRI1	YNL308C	MIP1	P15801	1254 aa		4.6	□□□□□ -1.67
KRI1	YNL308C	ACS2	P52910	683 aa	Known RBP	4.6	□□□□□ -1.67
KRI1	YNL308C	SPP41	P38904	1435 aa		4.6	□□□□□ -1.67
KRI1	YNL308C	HAP4	P14064	554 aa		4.59	□□□□□ -1.67
KRI1	YNL308C	PDI1	P17967	522 aa	Known RBP	4.59	□□□□□ -1.67
KRI1	YNL308C	MRT4	P33201	236 aa	Known RBP	4.59	□□□□□ -1.67
KRI1	YNL308C	MKS1	P34072	584 aa		4.59	□□□□□ -1.67
KRI1	YNL308C	CLA4	P48562	842 aa		4.59	□□□□□ -1.67
KRI1	YNL308C	NOP7	P53261	605 aa	Known RBP	4.59	□□□□□ -1.67
KRI1	YNL308C	TSC13	Q99190	310 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms