RNA–Protein interactions for RNA: YNL207W

RIO2, Essential serine kinase involved in the processing of 20S pre-rRNA, yeast

Gene RIO2, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIO2	YNL207W	RPN1	P38764	993 aa	Known RBP	5.91	□□□□□ -1.46
RIO2	YNL207W	TBF1	Q02457	562 aa		5.91	□□□□□ -1.46
RIO2	YNL207W	ALR1	Q08269	859 aa		5.91	□□□□□ -1.46
RIO2	YNL207W	SLY41	P22215	453 aa		5.9	□□□□□ -1.46
RIO2	YNL207W	LSB3	P43603	459 aa	Known RBP	5.9	□□□□□ -1.46
RIO2	YNL207W	UBP2	Q01476	1272 aa		5.9	□□□□□ -1.46
RIO2	YNL207W	MMP1	Q12372	583 aa		5.89	□□□□□ -1.47
RIO2	YNL207W	ESS1	P22696	170 aa		5.88	□□□□□ -1.47
RIO2	YNL207W	GLN1	P32288	370 aa	Known RBP	5.88	□□□□□ -1.47
RIO2	YNL207W	LSC2	P53312	427 aa		5.88	□□□□□ -1.47
RIO2	YNL207W	MRT4	P33201	236 aa	Known RBP	5.87	□□□□□ -1.47
RIO2	YNL207W	DPH6	Q12429	685 aa		5.87	□□□□□ -1.47
RIO2	YNL207W	ARG82	P07250	355 aa		5.86	□□□□□ -1.47
RIO2	YNL207W	TRM1	P15565	570 aa	Known RBP	5.86	□□□□□ -1.47
RIO2	YNL207W	YJU3	P28321	313 aa		5.86	□□□□□ -1.47
RIO2	YNL207W	RPA14	P50106	137 aa		5.86	□□□□□ -1.47
RIO2	YNL207W	PHM7	Q12252	991 aa		5.86	□□□□□ -1.47
RIO2	YNL207W	CSN12	P47130	423 aa		5.85	□□□□□ -1.47
RIO2	YNL207W	RSC30	P38781	883 aa		5.84	□□□□□ -1.47
RIO2	YNL207W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.84	□□□□□ -1.47	not detected
RIO2	YNL207W	PUS6	P53294	404 aa		5.84	□□□□□ -1.47
RIO2	YNL207W	YDL206W	Q12424	762 aa		5.84	□□□□□ -1.47
RIO2	YNL207W	YPR097W	Q06839	1073 aa		5.82	□□□□□ -1.48
RIO2	YNL207W	AAD14	P42884	376 aa		5.81	□□□□□ -1.48
RIO2	YNL207W	ROG3	P43602	733 aa		5.81	□□□□□ -1.48
RIO2	YNL207W	PKH3	Q03306	898 aa	Predicted RBP	5.81	□□□□□ -1.48
RIO2	YNL207W	GUA1	P38625	525 aa	Known RBP	5.8	□□□□□ -1.48
RIO2	YNL207W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.79	□□□□□ -1.48	not detected
RIO2	YNL207W	YJR098C	P47139	656 aa		5.78	□□□□□ -1.48
RIO2	YNL207W	LYS5	P50113	272 aa		5.78	□□□□□ -1.48
RIO2	YNL207W	TCB1	Q12466	1186 aa		5.78	□□□□□ -1.48
RIO2	YNL207W	DLD1	P32891	587 aa		5.77	□□□□□ -1.49
RIO2	YNL207W	TY1A-MR1	Q04215	440 aa		5.77	□□□□□ -1.49
RIO2	YNL207W	RAD59	Q12223	238 aa		5.77	□□□□□ -1.49
RIO2	YNL207W	NSG2	P53898	299 aa		5.76	□□□□□ -1.49
RIO2	YNL207W	SSA2	P10592	639 aa	Known RBP	5.75	□□□□□ -1.49
RIO2	YNL207W	ARG8	P18544	423 aa		5.75	□□□□□ -1.49
RIO2	YNL207W	OSH7	P38755	437 aa		5.75	□□□□□ -1.49
RIO2	YNL207W	MDJ1	P35191	511 aa		5.73	□□□□□ -1.49
RIO2	YNL207W	YBL086C	P38177	466 aa		5.73	□□□□□ -1.49
RIO2	YNL207W	JJJ3	P47138	172 aa		5.73	□□□□□ -1.49
RIO2	YNL207W	HPC2	Q01448	625 aa		5.73	□□□□□ -1.49
RIO2	YNL207W	LEO1	P38439	464 aa		5.71	□□□□□ -1.5
RIO2	YNL207W	VAC17	P25591	423 aa		5.7	□□□□□ -1.5
RIO2	YNL207W	CCP1	P00431	361 aa		5.69	□□□□□ -1.5
RIO2	YNL207W	MAK16	P10962	306 aa	Predicted RBP	5.69	□□□□□ -1.5
RIO2	YNL207W	FIG4	P42837	879 aa		5.69	□□□□□ -1.5
RIO2	YNL207W	TFB3	Q03290	321 aa		5.69	□□□□□ -1.5
RIO2	YNL207W	SBP1	P10080	294 aa	Known RBP	5.68	□□□□□ -1.5
RIO2	YNL207W	APP1	P53933	587 aa		5.68	□□□□□ -1.5
RIO2	YNL207W	AI1	P03875	834 aa		5.67	□□□□□ -1.5
RIO2	YNL207W	PKC1	P24583	1151 aa		5.67	□□□□□ -1.5
RIO2	YNL207W	ITT1	Q04638	464 aa		5.67	□□□□□ -1.5
RIO2	YNL207W	YPR084W	Q06821	456 aa		5.67	□□□□□ -1.5
RIO2	YNL207W	THI72	Q08579	599 aa		5.67	□□□□□ -1.5
RIO2	YNL207W	CCT8	P47079	568 aa	Known RBP	5.64	□□□□□ -1.51
RIO2	YNL207W	TEC1	P18412	486 aa		5.63	□□□□□ -1.51
RIO2	YNL207W	CSE4	P36012	229 aa		5.63	□□□□□ -1.51
RIO2	YNL207W	BRL1	P38770	471 aa		5.63	□□□□□ -1.51
RIO2	YNL207W	EMW1	P42842	904 aa	Known RBP	5.63	□□□□□ -1.51
RIO2	YNL207W	YPR053C	Q6Q5F3	151 aa		5.63	□□□□□ -1.51
RIO2	YNL207W	BIO2	P32451	375 aa		5.62	□□□□□ -1.51
RIO2	YNL207W	NAF1	P53919	492 aa	Known RBP	5.62	□□□□□ -1.51
RIO2	YNL207W	MKS1	P34072	584 aa		5.61	□□□□□ -1.51
RIO2	YNL207W	YBL036C	P38197	257 aa		5.61	□□□□□ -1.51
RIO2	YNL207W	DFG5	Q05031	458 aa		5.59	□□□□□ -1.51
RIO2	YNL207W	BDS1	Q08347	646 aa		5.59	□□□□□ -1.51
RIO2	YNL207W	CDC19	P00549	500 aa	Known RBP	5.58	□□□□□ -1.52
RIO2	YNL207W	YDJ1	P25491	409 aa	Known RBP	5.58	□□□□□ -1.52
RIO2	YNL207W	SPT5	P27692	1063 aa	Known RBP	5.58	□□□□□ -1.52
RIO2	YNL207W	CEM1	P39525	442 aa		5.58	□□□□□ -1.52
RIO2	YNL207W	FRA1	Q07825	749 aa		5.58	□□□□□ -1.52
RIO2	YNL207W	NAM8	Q00539	523 aa	Known RBP	5.57	□□□□□ -1.52
RIO2	YNL207W	SUP45	P12385	437 aa	Known RBP	5.56	□□□□□ -1.52
RIO2	YNL207W	GUT2	P32191	649 aa		5.56	□□□□□ -1.52
RIO2	YNL207W	YFL066C	P43538	392 aa		5.56	□□□□□ -1.52
RIO2	YNL207W	CUZ1	P53899	274 aa		5.56	□□□□□ -1.52
RIO2	YNL207W	MCM16	Q12262	181 aa		5.56	□□□□□ -1.52
RIO2	YNL207W	APL6	P46682	809 aa		5.55	□□□□□ -1.52
RIO2	YNL207W	ADE12	P80210	433 aa	Known RBP	5.55	□□□□□ -1.52
RIO2	YNL207W	VTC4	P47075	721 aa		5.54	□□□□□ -1.52
RIO2	YNL207W	ISF1	P32488	338 aa		5.53	□□□□□ -1.52
RIO2	YNL207W	YNL108C	P53929	270 aa		5.53	□□□□□ -1.52
RIO2	YNL207W	STE20	Q03497	939 aa	Known RBP	5.53	□□□□□ -1.52
RIO2	YNL207W	ENO2	P00925	437 aa	Known RBP	5.52	□□□□□ -1.53
RIO2	YNL207W	FBP26	P32604	452 aa		5.52	□□□□□ -1.53
RIO2	YNL207W	EMP47	P43555	445 aa		5.52	□□□□□ -1.53
RIO2	YNL207W	YJL007C	P47080	104 aa		5.52	□□□□□ -1.53
RIO2	YNL207W	YMR187C	Q03236	431 aa		5.52	□□□□□ -1.53
RIO2	YNL207W	BIM1	P40013	344 aa		5.51	□□□□□ -1.53
RIO2	YNL207W	DMA2	P53924	522 aa		5.51	□□□□□ -1.53
RIO2	YNL207W	SKN7	P38889	622 aa		5.5	□□□□□ -1.53
RIO2	YNL207W	ATG32	P40458	529 aa		5.5	□□□□□ -1.53
RIO2	YNL207W	MRX12	P47084	519 aa		5.5	□□□□□ -1.53
RIO2	YNL207W	RIM21	P48565	533 aa		5.5	□□□□□ -1.53
RIO2	YNL207W	TDA6	Q06466	467 aa		5.5	□□□□□ -1.53
RIO2	YNL207W	STE6	P12866	1290 aa		5.49	□□□□□ -1.53
RIO2	YNL207W	ATG20	Q07528	640 aa		5.49	□□□□□ -1.53
RIO2	YNL207W	RPP2B	P02400	110 aa	Known RBP	5.48	□□□□□ -1.53
RIO2	YNL207W	RDS2	P19541	446 aa	Known RBP	5.48	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms