RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	TTI1	P36097	1038 aa		6.16	□□□□□ -1.42
TPM1	YNL079C	CST6	P40535	587 aa		6.16	□□□□□ -1.42
TPM1	YNL079C	BDP1	P46678	594 aa		6.16	□□□□□ -1.42
TPM1	YNL079C	FRA1	Q07825	749 aa		6.16	□□□□□ -1.42
TPM1	YNL079C	GUT2	P32191	649 aa		6.15	□□□□□ -1.42
TPM1	YNL079C	ISF1	P32488	338 aa		6.15	□□□□□ -1.42
TPM1	YNL079C	EMP47	P43555	445 aa		6.15	□□□□□ -1.42
TPM1	YNL079C	STE20	Q03497	939 aa	Known RBP	6.15	□□□□□ -1.42
TPM1	YNL079C	YEL077C	Q3E7X8	1277 aa		6.15	□□□□□ -1.42
TPM1	YNL079C	FRK1	Q03002	865 aa	Predicted RBP	6.14	□□□□□ -1.43
TPM1	YNL079C	RDS2	P19541	446 aa	Known RBP	6.13	□□□□□ -1.43
TPM1	YNL079C	CPS1	P27614	576 aa		6.13	□□□□□ -1.43
TPM1	YNL079C	PUS5	Q06244	254 aa		6.13	□□□□□ -1.43
TPM1	YNL079C	SSA4	P22202	642 aa	Known RBP	6.12	□□□□□ -1.43
TPM1	YNL079C	MRX12	P47084	519 aa		6.12	□□□□□ -1.43
TPM1	YNL079C	SUB2	Q07478	446 aa	Known RBP	6.12	□□□□□ -1.43
TPM1	YNL079C	AMS1	P22855	1083 aa		6.11	□□□□□ -1.43
TPM1	YNL079C	PEP12	P32854	288 aa		6.11	□□□□□ -1.43
TPM1	YNL079C	IXR1	P33417	597 aa		6.11	□□□□□ -1.43
TPM1	YNL079C	SIS2	P36024	562 aa		6.11	□□□□□ -1.43
TPM1	YNL079C	KIP2	P28743	706 aa		6.1	□□□□□ -1.43
TPM1	YNL079C	APL6	P46682	809 aa		6.1	□□□□□ -1.43
TPM1	YNL079C	SYH1	Q02875	849 aa	Known RBP	6.1	□□□□□ -1.43
TPM1	YNL079C	ITT1	Q04638	464 aa		6.1	□□□□□ -1.43
TPM1	YNL079C	ENV9	Q08651	330 aa		6.1	□□□□□ -1.43
TPM1	YNL079C	RAS1	P01119	309 aa		6.08	□□□□□ -1.44
TPM1	YNL079C	ATG3	P40344	310 aa		6.08	□□□□□ -1.44
TPM1	YNL079C	UTP13	Q05946	817 aa	Known RBP	6.07	□□□□□ -1.44
TPM1	YNL079C	TGL4	P36165	910 aa		6.06	□□□□□ -1.44
TPM1	YNL079C	HED1	Q03937	162 aa		6.06	□□□□□ -1.44
TPM1	YNL079C	PUP1	P25043	261 aa		6.05	□□□□□ -1.44
TPM1	YNL079C	SOH1	P38633	127 aa		6.05	□□□□□ -1.44
TPM1	YNL079C	EMW1	P42842	904 aa	Known RBP	6.05	□□□□□ -1.44
TPM1	YNL079C	NOB1	Q08444	459 aa	Known RBP	6.05	□□□□□ -1.44
TPM1	YNL079C	SSA1	P10591	642 aa	Known RBP	6.04	□□□□□ -1.44
TPM1	YNL079C	KTR7	P40504	517 aa		6.04	□□□□□ -1.44
TPM1	YNL079C	APP1	P53933	587 aa		6.04	□□□□□ -1.44
TPM1	YNL079C	MRT4	P33201	236 aa	Known RBP	6.03	□□□□□ -1.44
TPM1	YNL079C	CLA4	P48562	842 aa		6.03	□□□□□ -1.44
TPM1	YNL079C	ATG20	Q07528	640 aa		6.03	□□□□□ -1.44
TPM1	YNL079C	DPS1	P04802	557 aa	Known RBP	6.02	□□□□□ -1.45
TPM1	YNL079C	HAL5	P38970	855 aa	Known RBP	6.02	□□□□□ -1.45
TPM1	YNL079C	ISR1	Q06098	443 aa	Known RBP	6.02	□□□□□ -1.45
TPM1	YNL079C	YML083C	Q04526	418 aa		6.01	□□□□□ -1.45
TPM1	YNL079C	GAL2	P13181	574 aa		6	□□□□□ -1.45
TPM1	YNL079C	ECM23	Q02710	187 aa		6	□□□□□ -1.45
TPM1	YNL079C	GEF1	P37020	779 aa		5.99	□□□□□ -1.45
TPM1	YNL079C	MET32	Q12041	191 aa		5.99	□□□□□ -1.45
TPM1	YNL079C	MKS1	P34072	584 aa		5.98	□□□□□ -1.45
TPM1	YNL079C	YBL086C	P38177	466 aa		5.98	□□□□□ -1.45
TPM1	YNL079C	AIR1	P40507	360 aa	Known RBP	5.98	□□□□□ -1.45
TPM1	YNL079C	ISU1	Q03020	165 aa		5.98	□□□□□ -1.45
TPM1	YNL079C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.98	□□□□□ -1.45	not detected
TPM1	YNL079C	CDC4	P07834	779 aa		5.97	□□□□□ -1.45
TPM1	YNL079C	PHO87	P25360	923 aa		5.97	□□□□□ -1.45
TPM1	YNL079C	FBP26	P32604	452 aa		5.97	□□□□□ -1.45
TPM1	YNL079C	HDA3	Q06623	655 aa		5.97	□□□□□ -1.45
TPM1	YNL079C	TSC13	Q99190	310 aa		5.97	□□□□□ -1.45
TPM1	YNL079C	HAP4	P14064	554 aa		5.96	□□□□□ -1.46
TPM1	YNL079C	MIP1	P15801	1254 aa		5.96	□□□□□ -1.46
TPM1	YNL079C	ACS2	P52910	683 aa	Known RBP	5.96	□□□□□ -1.46
TPM1	YNL079C	SGS1	P35187	1447 aa		5.96	□□□□□ -1.46
TPM1	YNL079C	STE6	P12866	1290 aa		5.95	□□□□□ -1.46
TPM1	YNL079C	PDI1	P17967	522 aa	Known RBP	5.95	□□□□□ -1.46
TPM1	YNL079C	UBX7	P38349	436 aa		5.95	□□□□□ -1.46
TPM1	YNL079C	SPT2	P06843	333 aa	Predicted RBP	5.94	□□□□□ -1.46
TPM1	YNL079C	AIM9	P40053	627 aa	Known RBP	5.94	□□□□□ -1.46
TPM1	YNL079C	YFL034W	P43564	1073 aa		5.94	□□□□□ -1.46
TPM1	YNL079C	RPL34A	P87262	121 aa	Predicted RBP	5.94	□□□□□ -1.46
TPM1	YNL079C	DFG5	Q05031	458 aa		5.94	□□□□□ -1.46
TPM1	YNL079C	AFT1	P22149	690 aa		5.93	□□□□□ -1.46
TPM1	YNL079C	UTR2	P32623	467 aa		5.93	□□□□□ -1.46
TPM1	YNL079C	ASH1	P34233	588 aa		5.93	□□□□□ -1.46
TPM1	YNL079C	RTT106	P40161	455 aa		5.93	□□□□□ -1.46
TPM1	YNL079C	ROM1	P53046	1155 aa		5.93	□□□□□ -1.46
TPM1	YNL079C	GAS4	Q08271	471 aa		5.93	□□□□□ -1.46
TPM1	YNL079C	HST3	P53687	447 aa		5.92	□□□□□ -1.46
TPM1	YNL079C	BDS1	Q08347	646 aa		5.92	□□□□□ -1.46
TPM1	YNL079C	UGA3	P26370	528 aa		5.91	□□□□□ -1.46
TPM1	YNL079C	NTH2	P35172	780 aa		5.91	□□□□□ -1.46
TPM1	YNL079C	SLX8	P40072	274 aa		5.91	□□□□□ -1.46
TPM1	YNL079C	MSB3	P48566	633 aa	Predicted RBP	5.91	□□□□□ -1.46
TPM1	YNL079C	DAT1	P13483	248 aa	Known RBP	5.9	□□□□□ -1.46
TPM1	YNL079C	WTM2	Q12206	467 aa		5.9	□□□□□ -1.46
TPM1	YNL079C	RPP2B	P02400	110 aa	Known RBP	5.89	□□□□□ -1.47
TPM1	YNL079C	SWI5	P08153	709 aa		5.89	□□□□□ -1.47
TPM1	YNL079C	RPS6A	P0CX37	236 aa	Known RBP	5.89	□□□□□ -1.47
TPM1	YNL079C	RPS6B	P0CX38	236 aa	Predicted RBP	5.89	□□□□□ -1.47
TPM1	YNL079C	TBS1	P38114	1094 aa		5.89	□□□□□ -1.47
TPM1	YNL079C	PUF6	Q04373	656 aa	Known RBP	5.89	□□□□□ -1.47
TPM1	YNL079C	CDC3	P32457	520 aa	Known RBP	5.88	□□□□□ -1.47
TPM1	YNL079C	TRK1	P12685	1235 aa		5.87	□□□□□ -1.47
TPM1	YNL079C	VAN1	P23642	535 aa		5.87	□□□□□ -1.47
TPM1	YNL079C	CWC15	Q03772	175 aa	Known RBP	5.87	□□□□□ -1.47
TPM1	YNL079C	INO80	P53115	1489 aa		5.87	□□□□□ -1.47
TPM1	YNL079C	YJR115W	P47152	169 aa		5.86	□□□□□ -1.47
TPM1	YNL079C	SRC1	Q03707	834 aa		5.86	□□□□□ -1.47
TPM1	YNL079C	CYT1	P07143	309 aa		5.85	□□□□□ -1.47
TPM1	YNL079C	ARG82	P07250	355 aa		5.85	□□□□□ -1.47
TPM1	YNL079C	UBP1	P25037	809 aa		5.85	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms