RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C YDR090CQ03193 310 aa2.81□□□□□ -1.96
SFB2YNL049C MAK21Q12176 1025 aaKnown RBP2.81□□□□□ -1.96
SFB2YNL049C GUA1P38625 525 aaKnown RBP2.8□□□□□ -1.96
SFB2YNL049C UBP14P38237 781 aaKnown RBP2.8□□□□□ -1.96
SFB2YNL049C RTT106P40161 455 aa2.8□□□□□ -1.96
SFB2YNL049C ARH1P48360 493 aa2.8□□□□□ -1.96
SFB2YNL049C YPL062WQ02781 134 aa2.8□□□□□ -1.96
SFB2YNL049C NUP192P47054 1683 aa2.8□□□□□ -1.96
SFB2YNL049C RAS1P01119 309 aa2.79□□□□□ -1.96
SFB2YNL049C YLR326WQ06170 240 aaKnown RBP2.79□□□□□ -1.96
SFB2YNL049C ATH1P48016 1211 aa2.78□□□□□ -1.96
SFB2YNL049C SRB8P25648 1427 aa2.78□□□□□ -1.96
SFB2YNL049C SPT23P35210 1082 aa2.78□□□□□ -1.96
SFB2YNL049C ATF2P53296 535 aa2.78□□□□□ -1.96
SFB2YNL049C GRE2Q12068 342 aaKnown RBP2.78□□□□□ -1.96
SFB2YNL049C GUT1P32190 709 aa2.77□□□□□ -1.97
SFB2YNL049C SOL3P38858 249 aa2.77□□□□□ -1.97
SFB2YNL049C YGR273CP53329 174 aa2.77□□□□□ -1.97
SFB2YNL049C RRP5Q05022 1729 aaKnown RBP2.77□□□□□ -1.97
SFB2YNL049C GLN1P32288 370 aaKnown RBP2.77□□□□□ -1.97
SFB2YNL049C PCS60P38137 543 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
SFB2YNL049C MID1P41821 548 aa2.76□□□□□ -1.97
SFB2YNL049C KEX1P09620 729 aa2.75□□□□□ -1.97
SFB2YNL049C TRK1P12685 1235 aa2.75□□□□□ -1.97
SFB2YNL049C YMR074CQ04773 145 aa2.75□□□□□ -1.97
SFB2YNL049C RAD54P32863 898 aa2.75□□□□□ -1.97
SFB2YNL049C HPC2Q01448 625 aa2.75□□□□□ -1.97
SFB2YNL049C KIC1P38692 1080 aa2.74□□□□□ -1.97
SFB2YNL049C HGH1P48362 394 aaKnown RBP2.74□□□□□ -1.97
SFB2YNL049C NST1P53935 1240 aa2.74□□□□□ -1.97
SFB2YNL049C TFB3Q03290 321 aa2.74□□□□□ -1.97
SFB2YNL049C PKC1P24583 1151 aa2.73□□□□□ -1.97
SFB2YNL049C PSE1P32337 1089 aaKnown RBP2.73□□□□□ -1.97
SFB2YNL049C PEX29Q03370 554 aa2.73□□□□□ -1.97
SFB2YNL049C ORC6P38826 435 aa2.73□□□□□ -1.97
SFB2YNL049C ILV3P39522 585 aaKnown RBP2.73□□□□□ -1.97
SFB2YNL049C PDR11P40550 1411 aa2.72□□□□□ -1.97
SFB2YNL049C KTR1P27810 393 aaKnown RBP2.72□□□□□ -1.97
SFB2YNL049C PTC2P39966 464 aaKnown RBP2.72□□□□□ -1.97
SFB2YNL049C CSN12P47130 423 aa2.72□□□□□ -1.97
SFB2YNL049C HAP5Q02516 242 aa2.71□□□□□ -1.98
SFB2YNL049C YLL066CQ99208 1374 aa2.71□□□□□ -1.98
SFB2YNL049C BRL1P38770 471 aa2.71□□□□□ -1.98
SFB2YNL049C IPL1P38991 367 aa2.71□□□□□ -1.98
SFB2YNL049C MPH3P0CE00 602 aa2.7□□□□□ -1.98
SFB2YNL049C RGR1P19263 1082 aa2.7□□□□□ -1.98
SFB2YNL049C TEA1P47988 759 aa2.7□□□□□ -1.98
SFB2YNL049C YML082WQ04533 649 aaKnown RBP2.7□□□□□ -1.98
SFB2YNL049C TYW1Q08960 810 aaKnown RBP2.7□□□□□ -1.98
SFB2YNL049C SNF2P22082 1703 aa2.7□□□□□ -1.98
SFB2YNL049C TY3B-IQ7LHG5 1498 aaKnown RBP2.7□□□□□ -1.98
SFB2YNL049C SSA2P10592 639 aaKnown RBP2.7□□□□□ -1.98
SFB2YNL049C THI12P42883 340 aa2.7□□□□□ -1.98
SFB2YNL049C THI5P43534 340 aa2.7□□□□□ -1.98
SFB2YNL049C THI11P47183 340 aa2.7□□□□□ -1.98
SFB2YNL049C THI13Q07748 340 aa2.7□□□□□ -1.98
SFB2YNL049C AI4P03878 556 aa2.69□□□□□ -1.98
SFB2YNL049C GBP2P25555 427 aaKnown RBP RIP-Chip data2.69□□□□□ -1.98not detected
SFB2YNL049C BIM1P40013 344 aa2.69□□□□□ -1.98
SFB2YNL049C MVP1P40959 511 aaKnown RBP2.69□□□□□ -1.98
SFB2YNL049C BNI4P53858 892 aa2.69□□□□□ -1.98
SFB2YNL049C URB1P34241 1764 aaKnown RBP2.69□□□□□ -1.98
SFB2YNL049C GAP1P19145 602 aaPredicted RBP2.69□□□□□ -1.98
SFB2YNL049C GAR1P28007 205 aaKnown RBP2.69□□□□□ -1.98
SFB2YNL049C SLI15P38283 698 aa2.69□□□□□ -1.98
SFB2YNL049C ATG32P40458 529 aa2.69□□□□□ -1.98
SFB2YNL049C YJL007CP47080 104 aa2.69□□□□□ -1.98
SFB2YNL049C SSA1P10591 642 aaKnown RBP2.68□□□□□ -1.98
SFB2YNL049C NIS1P53939 407 aa2.68□□□□□ -1.98
SFB2YNL049C CDC73Q06697 393 aa2.67□□□□□ -1.98
SFB2YNL049C FKS3Q04952 1785 aa2.67□□□□□ -1.98
SFB2YNL049C FPK1P53739 893 aa2.67□□□□□ -1.98
SFB2YNL049C YPR109WQ06104 294 aa2.67□□□□□ -1.98
SFB2YNL049C ERG12P07277 443 aa2.66□□□□□ -1.98
SFB2YNL049C AMS1P22855 1083 aa2.66□□□□□ -1.98
SFB2YNL049C UBP1P25037 809 aa2.66□□□□□ -1.98
SFB2YNL049C SCJ1P25303 377 aa2.66□□□□□ -1.98
SFB2YNL049C CLB5P30283 435 aa2.66□□□□□ -1.98
SFB2YNL049C SUB2Q07478 446 aaKnown RBP2.66□□□□□ -1.98
SFB2YNL049C ROM2P51862 1356 aaKnown RBP2.66□□□□□ -1.98
SFB2YNL049C ESS1P22696 170 aa2.66□□□□□ -1.98
SFB2YNL049C BIO2P32451 375 aa2.66□□□□□ -1.98
SFB2YNL049C HST2P53686 357 aa2.66□□□□□ -1.98
SFB2YNL049C CSC1Q06538 782 aa2.66□□□□□ -1.98
SFB2YNL049C TIF1P10081 395 aaKnown RBP2.65□□□□□ -1.98
SFB2YNL049C YJU3P28321 313 aa2.65□□□□□ -1.99
SFB2YNL049C YBL036CP38197 257 aa2.65□□□□□ -1.99
SFB2YNL049C PKH3Q03306 898 aaPredicted RBP2.65□□□□□ -1.99
SFB2YNL049C RAD59Q12223 238 aa2.65□□□□□ -1.99
SFB2YNL049C MMP1Q12372 583 aa2.65□□□□□ -1.99
SFB2YNL049C RPS9BP05755 195 aaKnown RBP2.64□□□□□ -1.99
SFB2YNL049C SPT7P35177 1332 aa2.64□□□□□ -1.99
SFB2YNL049C TFB4Q12004 338 aa2.64□□□□□ -1.99
SFB2YNL049C YEF3P16521 1044 aaKnown RBP2.63□□□□□ -1.99
SFB2YNL049C SIT4P20604 311 aa2.63□□□□□ -1.99
SFB2YNL049C YNL108CP53929 270 aa2.63□□□□□ -1.99
SFB2YNL049C TUM1Q08686 304 aaKnown RBP2.63□□□□□ -1.99
SFB2YNL049C YPR204WQ08995 1032 aa2.63□□□□□ -1.99
SFB2YNL049C RSF2P46974 1380 aa2.63□□□□□ -1.99
SFB2YNL049C TY4B-HP0C2J7 1802 aa2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms