RNA–Protein interactions for RNA: YNL009W

IDP3, Transcript of Peroxisomal NADP-dependent isocitrate dehydrogenase, yeastyeast

Gene IDP3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IDP3YNL009W POL32P47110 350 aa9.68□□□□□ -0.86
IDP3YNL009W YPR015CQ12531 247 aa9.68□□□□□ -0.86
IDP3YNL009W YEL077CQ3E7X8 1277 aa9.68□□□□□ -0.86
IDP3YNL009W ISF1P32488 338 aa9.67□□□□□ -0.86
IDP3YNL009W ATG3P40344 310 aa9.66□□□□□ -0.86
IDP3YNL009W EMP47P43555 445 aa9.66□□□□□ -0.86
IDP3YNL009W THI12P42883 340 aa9.65□□□□□ -0.86
IDP3YNL009W THI5P43534 340 aa9.65□□□□□ -0.86
IDP3YNL009W THI11P47183 340 aa9.65□□□□□ -0.86
IDP3YNL009W THI13Q07748 340 aa9.65□□□□□ -0.86
IDP3YNL009W PDR1P12383 1068 aa9.64□□□□□ -0.87
IDP3YNL009W KEX2P13134 814 aa9.64□□□□□ -0.87
IDP3YNL009W PUF6Q04373 656 aaKnown RBP9.64□□□□□ -0.87
IDP3YNL009W SVF1Q05515 481 aa9.64□□□□□ -0.87
IDP3YNL009W TPS3P38426 1054 aaKnown RBP9.62□□□□□ -0.87
IDP3YNL009W PPX1P38698 397 aa9.62□□□□□ -0.87
IDP3YNL009W TRL1P09880 827 aaKnown RBP9.61□□□□□ -0.87
IDP3YNL009W PHO87P25360 923 aa9.61□□□□□ -0.87
IDP3YNL009W CWC15Q03772 175 aaKnown RBP9.61□□□□□ -0.87
IDP3YNL009W RRP15Q06511 250 aaPredicted RBP9.61□□□□□ -0.87
IDP3YNL009W GYP1Q08484 637 aa9.61□□□□□ -0.87
IDP3YNL009W HAP4P14064 554 aa9.6□□□□□ -0.87
IDP3YNL009W BRN1P38170 754 aa9.6□□□□□ -0.87
IDP3YNL009W OCA5P38738 679 aa9.6□□□□□ -0.87
IDP3YNL009W ATE1P16639 503 aa9.59□□□□□ -0.87
IDP3YNL009W MDJ2P42834 146 aa9.59□□□□□ -0.87
IDP3YNL009W NNF1P47149 201 aa9.59□□□□□ -0.87
IDP3YNL009W SAS4Q04003 481 aa9.59□□□□□ -0.87
IDP3YNL009W NUD1P32336 851 aa9.58□□□□□ -0.88
IDP3YNL009W NPL4P33755 580 aa9.58□□□□□ -0.88
IDP3YNL009W STE20Q03497 939 aaKnown RBP9.58□□□□□ -0.88
IDP3YNL009W PNP1Q05788 311 aa9.58□□□□□ -0.88
IDP3YNL009W TEC1P18412 486 aa9.57□□□□□ -0.88
IDP3YNL009W ATG1P53104 897 aa9.57□□□□□ -0.88
IDP3YNL009W YDL206WQ12424 762 aa9.57□□□□□ -0.88
IDP3YNL009W FUR4P05316 633 aaKnown RBP9.56□□□□□ -0.88
IDP3YNL009W GUT2P32191 649 aa9.56□□□□□ -0.88
IDP3YNL009W MGE1P38523 228 aa9.56□□□□□ -0.88
IDP3YNL009W OYE2Q03558 400 aaKnown RBP9.56□□□□□ -0.88
IDP3YNL009W FPR4Q06205 392 aaPredicted RBP9.56□□□□□ -0.88
IDP3YNL009W ERF2Q06551 359 aa9.56□□□□□ -0.88
IDP3YNL009W WHI5Q12416 295 aa9.56□□□□□ -0.88
IDP3YNL009W PUN1Q06991 263 aa9.55□□□□□ -0.88
IDP3YNL009W ACS2P52910 683 aaKnown RBP9.54□□□□□ -0.88
IDP3YNL009W FRA1Q07825 749 aa9.53□□□□□ -0.88
IDP3YNL009W SRS2P12954 1174 aa9.52□□□□□ -0.89
IDP3YNL009W SEC8P32855 1065 aa9.52□□□□□ -0.89
IDP3YNL009W SOH1P38633 127 aa9.52□□□□□ -0.89
IDP3YNL009W BOL3P39724 118 aa9.52□□□□□ -0.89
IDP3YNL009W ROM1P53046 1155 aa9.52□□□□□ -0.89
IDP3YNL009W UTP13Q05946 817 aaKnown RBP9.52□□□□□ -0.89
IDP3YNL009W JIP5Q06214 492 aaPredicted RBP9.52□□□□□ -0.89
IDP3YNL009W GAS4Q08271 471 aa9.52□□□□□ -0.89
IDP3YNL009W GLO3P38682 493 aaKnown RBP9.51□□□□□ -0.89
IDP3YNL009W RPA14P50106 137 aa9.5□□□□□ -0.89
IDP3YNL009W BUD20Q08004 166 aaPredicted RBP9.5□□□□□ -0.89
IDP3YNL009W QDR1P40475 563 aa9.49□□□□□ -0.89
IDP3YNL009W NUT2Q06213 157 aa9.49□□□□□ -0.89
IDP3YNL009W PRT1P06103 763 aaKnown RBP9.48□□□□□ -0.89
IDP3YNL009W VAN1P23642 535 aa9.48□□□□□ -0.89
IDP3YNL009W FIG4P42837 879 aa9.48□□□□□ -0.89
IDP3YNL009W ACF4P47129 309 aa9.48□□□□□ -0.89
IDP3YNL009W ALR1Q08269 859 aa9.48□□□□□ -0.89
IDP3YNL009W TSC13Q99190 310 aa9.48□□□□□ -0.89
IDP3YNL009W SPC42P36094 363 aa9.47□□□□□ -0.89
IDP3YNL009W ALD4P46367 519 aaKnown RBP9.47□□□□□ -0.89
IDP3YNL009W DOS2P54858 310 aa9.47□□□□□ -0.89
IDP3YNL009W STB3Q12427 513 aa9.47□□□□□ -0.89
IDP3YNL009W RAS1P01119 309 aa9.46□□□□□ -0.9
IDP3YNL009W PDI1P17967 522 aaKnown RBP9.46□□□□□ -0.9
IDP3YNL009W STR2P47164 639 aa9.46□□□□□ -0.9
IDP3YNL009W TUB4P53378 473 aa9.46□□□□□ -0.9
IDP3YNL009W TRS33Q99394 268 aa9.46□□□□□ -0.9
IDP3YNL009W AMS1P22855 1083 aa9.45□□□□□ -0.9
IDP3YNL009W MRF1P30775 413 aaPredicted RBP9.45□□□□□ -0.9
IDP3YNL009W ISM1P48526 1002 aa9.45□□□□□ -0.9
IDP3YNL009W YPR097WQ06839 1073 aa9.45□□□□□ -0.9
IDP3YNL009W MET1P36150 593 aa9.44□□□□□ -0.9
IDP3YNL009W CST6P40535 587 aa9.44□□□□□ -0.9
IDP3YNL009W YFL034WP43564 1073 aa9.44□□□□□ -0.9
IDP3YNL009W YJR107WP47145 328 aa9.44□□□□□ -0.9
IDP3YNL009W GCD11P32481 527 aaKnown RBP9.43□□□□□ -0.9
IDP3YNL009W NMD2P38798 1089 aaKnown RBP9.43□□□□□ -0.9
IDP3YNL009W APL6P46682 809 aa9.43□□□□□ -0.9
IDP3YNL009W YPR084WQ06821 456 aa9.43□□□□□ -0.9
IDP3YNL009W FRT1Q99332 602 aa9.43□□□□□ -0.9
IDP3YNL009W SRC1Q03707 834 aa9.42□□□□□ -0.9
IDP3YNL009W AGE1Q04412 482 aa9.42□□□□□ -0.9
IDP3YNL009W SDH2P21801 266 aa9.41□□□□□ -0.9
IDP3YNL009W YAF9P53930 226 aa9.41□□□□□ -0.9
IDP3YNL009W YOL098CQ12496 1037 aa9.4□□□□□ -0.9
IDP3YNL009W SPT2P06843 333 aaPredicted RBP9.39□□□□□ -0.91
IDP3YNL009W MET4P32389 672 aa9.39□□□□□ -0.91
IDP3YNL009W SPR3P41901 512 aa9.38□□□□□ -0.91
IDP3YNL009W CWH41P53008 833 aa9.38□□□□□ -0.91
IDP3YNL009W MAG2Q06436 670 aaKnown RBP9.38□□□□□ -0.91
IDP3YNL009W CBC2Q08920 208 aaKnown RBP RIP-Chip data9.38□□□□□ -0.91 RIP-Chip
IDP3YNL009W MIP1P15801 1254 aa9.37□□□□□ -0.91
IDP3YNL009W AIM9P40053 627 aaKnown RBP9.37□□□□□ -0.91
IDP3YNL009W KXD1P53158 218 aa9.37□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 83.5 ms