RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W GUT1P32190 709 aa3.39□□□□□ -1.87
UBP15YMR304W YFR016CP43597 1233 aaKnown RBP3.39□□□□□ -1.87
UBP15YMR304W PTC4P38089 393 aa3.38□□□□□ -1.87
UBP15YMR304W EAR1Q03212 550 aa3.38□□□□□ -1.87
UBP15YMR304W YDL129WQ07555 291 aa3.38□□□□□ -1.87
UBP15YMR304W NOP53Q12080 455 aaKnown RBP3.37□□□□□ -1.87
UBP15YMR304W NUP192P47054 1683 aa3.37□□□□□ -1.87
UBP15YMR304W DAN4P47179 1161 aa3.36□□□□□ -1.87
UBP15YMR304W PML39Q03760 334 aa3.36□□□□□ -1.87
UBP15YMR304W PEX29Q03370 554 aa3.34□□□□□ -1.87
UBP15YMR304W YPR148CQ06523 435 aa3.34□□□□□ -1.87
UBP15YMR304W URB1P34241 1764 aaKnown RBP3.34□□□□□ -1.87
UBP15YMR304W TYW1Q08960 810 aaKnown RBP3.34□□□□□ -1.87
UBP15YMR304W TY3B-IQ7LHG5 1498 aaKnown RBP3.34□□□□□ -1.87
UBP15YMR304W ALD3P54114 506 aa3.34□□□□□ -1.88
UBP15YMR304W TCB2P48231 1178 aa3.33□□□□□ -1.88
UBP15YMR304W ENT1Q12518 454 aa3.33□□□□□ -1.88
UBP15YMR304W SET1P38827 1080 aaKnown RBP3.33□□□□□ -1.88
UBP15YMR304W ELP4Q02884 456 aaKnown RBP3.33□□□□□ -1.88
UBP15YMR304W RAD9P14737 1309 aa3.33□□□□□ -1.88
UBP15YMR304W SDH2P21801 266 aa3.32□□□□□ -1.88
UBP15YMR304W DUR1,2P32528 1835 aaKnown RBP3.32□□□□□ -1.88
UBP15YMR304W PRP40P33203 583 aaKnown RBP3.32□□□□□ -1.88
UBP15YMR304W CAB3P36076 571 aa3.32□□□□□ -1.88
UBP15YMR304W RPS0BP46654 252 aaKnown RBP3.32□□□□□ -1.88
UBP15YMR304W MID1P41821 548 aa3.32□□□□□ -1.88
UBP15YMR304W APP1P53933 587 aa3.31□□□□□ -1.88
UBP15YMR304W CHL1P22516 861 aaPredicted RBP3.3□□□□□ -1.88
UBP15YMR304W SOL3P38858 249 aa3.3□□□□□ -1.88
UBP15YMR304W VPS4P52917 437 aa3.3□□□□□ -1.88
UBP15YMR304W PRE3P38624 215 aa3.3□□□□□ -1.88
UBP15YMR304W YGR273CP53329 174 aa3.3□□□□□ -1.88
UBP15YMR304W CTT1P06115 562 aa3.29□□□□□ -1.88
UBP15YMR304W GLC3P32775 704 aa3.29□□□□□ -1.88
UBP15YMR304W SSA4P22202 642 aaKnown RBP3.29□□□□□ -1.88
UBP15YMR304W YJL181WP46987 611 aa3.29□□□□□ -1.88
UBP15YMR304W FPK1P53739 893 aa3.29□□□□□ -1.88
UBP15YMR304W AI4P03878 556 aa3.29□□□□□ -1.88
UBP15YMR304W MPH3P0CE00 602 aa3.29□□□□□ -1.88
UBP15YMR304W YNR029CP53729 429 aaKnown RBP3.29□□□□□ -1.88
UBP15YMR304W SEC3P33332 1336 aaKnown RBP3.29□□□□□ -1.88
UBP15YMR304W MHP1P43638 1398 aa3.28□□□□□ -1.88
UBP15YMR304W ILV3P39522 585 aaKnown RBP3.28□□□□□ -1.88
UBP15YMR304W YDR344CQ05510 147 aa3.28□□□□□ -1.88
UBP15YMR304W SAP155P43612 1002 aa3.28□□□□□ -1.89
UBP15YMR304W YRB30P53107 440 aaPredicted RBP3.27□□□□□ -1.89
UBP15YMR304W BCK2P33306 851 aa3.27□□□□□ -1.89
UBP15YMR304W BYE1P36106 594 aa3.27□□□□□ -1.89
UBP15YMR304W ETP1P38748 585 aaKnown RBP3.27□□□□□ -1.89
UBP15YMR304W VHR2P40041 505 aa3.27□□□□□ -1.89
UBP15YMR304W CTH1P47976 325 aa3.27□□□□□ -1.89
UBP15YMR304W DMA1P38823 416 aa3.26□□□□□ -1.89
UBP15YMR304W NST1P53935 1240 aa3.26□□□□□ -1.89
UBP15YMR304W LAM6Q08001 693 aa3.26□□□□□ -1.89
UBP15YMR304W FKS3Q04952 1785 aa3.26□□□□□ -1.89
UBP15YMR304W PLP2Q12017 286 aa3.25□□□□□ -1.89
UBP15YMR304W UTP22P53254 1237 aaPredicted RBP3.25□□□□□ -1.89
UBP15YMR304W VRP1P37370 817 aa3.25□□□□□ -1.89
UBP15YMR304W KEX1P09620 729 aa3.24□□□□□ -1.89
UBP15YMR304W ARH1P48360 493 aa3.24□□□□□ -1.89
UBP15YMR304W MPC54Q08550 464 aa3.24□□□□□ -1.89
UBP15YMR304W SLI15P38283 698 aa3.24□□□□□ -1.89
UBP15YMR304W IFH1P39520 1085 aa3.24□□□□□ -1.89
UBP15YMR304W NUG1P40010 520 aaKnown RBP3.24□□□□□ -1.89
UBP15YMR304W NCS6P53088 359 aa3.24□□□□□ -1.89
UBP15YMR304W HAP5Q02516 242 aa3.24□□□□□ -1.89
UBP15YMR304W TIF6Q12522 245 aaKnown RBP3.24□□□□□ -1.89
UBP15YMR304W RAD54P32863 898 aa3.23□□□□□ -1.89
UBP15YMR304W KIC1P38692 1080 aa3.23□□□□□ -1.89
UBP15YMR304W MRX12P47084 519 aa3.23□□□□□ -1.89
UBP15YMR304W LEU3P08638 886 aa3.23□□□□□ -1.89
UBP15YMR304W VPS70P47161 811 aa3.23□□□□□ -1.89
UBP15YMR304W YNR014WP53719 212 aa3.23□□□□□ -1.89
UBP15YMR304W PSK1P31374 1356 aa3.23□□□□□ -1.89
UBP15YMR304W WHI3P34761 661 aaKnown RBP3.23□□□□□ -1.89
UBP15YMR304W YKL222CP35995 705 aa3.23□□□□□ -1.89
UBP15YMR304W OPY1P38271 328 aa3.23□□□□□ -1.89
UBP15YMR304W KRI1P42846 591 aaKnown RBP3.23□□□□□ -1.89
UBP15YMR304W IME2P32581 645 aa3.22□□□□□ -1.89
UBP15YMR304W SPT23P35210 1082 aa3.22□□□□□ -1.89
UBP15YMR304W NMA111P53920 997 aa3.22□□□□□ -1.89
UBP15YMR304W APC1P53886 1748 aa3.22□□□□□ -1.89
UBP15YMR304W MDG1P53885 366 aa3.22□□□□□ -1.89
UBP15YMR304W DPL1Q05567 589 aa3.22□□□□□ -1.89
UBP15YMR304W YLR326WQ06170 240 aaKnown RBP3.22□□□□□ -1.89
UBP15YMR304W PTC2P39966 464 aaKnown RBP3.22□□□□□ -1.89
UBP15YMR304W RRT14P40470 206 aa3.22□□□□□ -1.89
UBP15YMR304W RPP1BP10622 106 aaKnown RBP3.21□□□□□ -1.9
UBP15YMR304W NAP1P25293 417 aaKnown RBP3.21□□□□□ -1.9
UBP15YMR304W UBP14P38237 781 aaKnown RBP3.21□□□□□ -1.9
UBP15YMR304W BSD2P38356 321 aa3.21□□□□□ -1.9
UBP15YMR304W CDC73Q06697 393 aa3.21□□□□□ -1.9
UBP15YMR304W YER156CP40093 338 aaKnown RBP3.2□□□□□ -1.9
UBP15YMR304W SPT16P32558 1035 aaKnown RBP3.2□□□□□ -1.9
UBP15YMR304W CHZ1P40019 153 aaPredicted RBP3.2□□□□□ -1.9
UBP15YMR304W YGR130CP53278 816 aa3.2□□□□□ -1.9
UBP15YMR304W PCS60P38137 543 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
UBP15YMR304W RSC30P38781 883 aa3.19□□□□□ -1.9
UBP15YMR304W NPR2P39923 615 aa3.19□□□□□ -1.9
UBP15YMR304W REF2P42073 533 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms