RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W TY1A-BLQ12266 440 aa6.84□□□□□ -1.31
CST9YLR394W MMP1Q12372 583 aa6.84□□□□□ -1.32
CST9YLR394W HPF1Q05164 967 aa6.82□□□□□ -1.32
CST9YLR394W ARG82P07250 355 aa6.8□□□□□ -1.32
CST9YLR394W VAC17P25591 423 aa6.8□□□□□ -1.32
CST9YLR394W GLN1P32288 370 aaKnown RBP6.8□□□□□ -1.32
CST9YLR394W YNR021WP53723 404 aaKnown RBP6.8□□□□□ -1.32
CST9YLR394W AAD14P42884 376 aa6.79□□□□□ -1.32
CST9YLR394W LSC2P53312 427 aa6.79□□□□□ -1.32
CST9YLR394W GLC3P32775 704 aa6.78□□□□□ -1.32
CST9YLR394W YBL086CP38177 466 aa6.78□□□□□ -1.32
CST9YLR394W UBP2Q01476 1272 aa6.78□□□□□ -1.32
CST9YLR394W ATF2P53296 535 aa6.77□□□□□ -1.33
CST9YLR394W ESS1P22696 170 aa6.76□□□□□ -1.33
CST9YLR394W RPN1P38764 993 aaKnown RBP6.75□□□□□ -1.33
CST9YLR394W YJR098CP47139 656 aa6.74□□□□□ -1.33
CST9YLR394W YJU3P28321 313 aa6.73□□□□□ -1.33
CST9YLR394W RSC30P38781 883 aa6.73□□□□□ -1.33
CST9YLR394W EMW1P42842 904 aaKnown RBP6.72□□□□□ -1.33
CST9YLR394W YPR204WQ08995 1032 aa6.72□□□□□ -1.33
CST9YLR394W TCB1Q12466 1186 aa6.72□□□□□ -1.33
CST9YLR394W DLD1P32891 587 aa6.71□□□□□ -1.34
CST9YLR394W APP1P53933 587 aa6.71□□□□□ -1.34
CST9YLR394W ROG3P43602 733 aa6.7□□□□□ -1.34
CST9YLR394W OSH7P38755 437 aa6.69□□□□□ -1.34
CST9YLR394W AIM7Q12156 149 aa6.69□□□□□ -1.34
CST9YLR394W TY1A-MR1Q04215 440 aa6.68□□□□□ -1.34
CST9YLR394W ITT1Q04638 464 aa6.68□□□□□ -1.34
CST9YLR394W DPH6Q12429 685 aa6.68□□□□□ -1.34
CST9YLR394W KTR1P27810 393 aaKnown RBP6.67□□□□□ -1.34
CST9YLR394W ICP55P40051 511 aa6.67□□□□□ -1.34
CST9YLR394W CCP1P00431 361 aa6.65□□□□□ -1.35
CST9YLR394W PKH3Q03306 898 aaPredicted RBP6.64□□□□□ -1.35
CST9YLR394W MKS1P34072 584 aa6.63□□□□□ -1.35
CST9YLR394W FIG4P42837 879 aa6.63□□□□□ -1.35
CST9YLR394W LYS5P50113 272 aa6.63□□□□□ -1.35
CST9YLR394W PUS1Q12211 544 aaKnown RBP6.63□□□□□ -1.35
CST9YLR394W KIN1P13185 1064 aa6.62□□□□□ -1.35
CST9YLR394W ARG8P18544 423 aa6.62□□□□□ -1.35
CST9YLR394W DFG5Q05031 458 aa6.61□□□□□ -1.35
CST9YLR394W CSN12P47130 423 aa6.6□□□□□ -1.35
CST9YLR394W PHM7Q12252 991 aa6.59□□□□□ -1.35
CST9YLR394W JJJ3P47138 172 aa6.59□□□□□ -1.36
CST9YLR394W BDS1Q08347 646 aa6.59□□□□□ -1.36
CST9YLR394W LSB3P43603 459 aaKnown RBP6.58□□□□□ -1.36
CST9YLR394W CDC19P00549 500 aaKnown RBP6.56□□□□□ -1.36
CST9YLR394W FBP26P32604 452 aa6.56□□□□□ -1.36
CST9YLR394W NAM8Q00539 523 aaKnown RBP6.56□□□□□ -1.36
CST9YLR394W STE6P12866 1290 aa6.55□□□□□ -1.36
CST9YLR394W TEC1P18412 486 aa6.55□□□□□ -1.36
CST9YLR394W MDJ1P35191 511 aa6.54□□□□□ -1.36
CST9YLR394W VTC4P47075 721 aa6.54□□□□□ -1.36
CST9YLR394W DMA2P53924 522 aa6.54□□□□□ -1.36
CST9YLR394W YPR084WQ06821 456 aa6.54□□□□□ -1.36
CST9YLR394W RAD59Q12223 238 aa6.54□□□□□ -1.36
CST9YLR394W GUA1P38625 525 aaKnown RBP6.52□□□□□ -1.37
CST9YLR394W NSG2P53898 299 aa6.5□□□□□ -1.37
CST9YLR394W SSA2P10592 639 aaKnown RBP6.48□□□□□ -1.37
CST9YLR394W DAL1P32375 460 aa6.48□□□□□ -1.37
CST9YLR394W CUZ1P53899 274 aa6.48□□□□□ -1.37
CST9YLR394W ISU1Q03020 165 aa6.48□□□□□ -1.37
CST9YLR394W AI1P03875 834 aa6.47□□□□□ -1.37
CST9YLR394W GUT2P32191 649 aa6.47□□□□□ -1.37
CST9YLR394W YFL066CP43538 392 aa6.46□□□□□ -1.38
CST9YLR394W TAF7Q05021 590 aa6.46□□□□□ -1.38
CST9YLR394W ATG20Q07528 640 aa6.46□□□□□ -1.38
CST9YLR394W THI72Q08579 599 aa6.46□□□□□ -1.38
CST9YLR394W CEM1P39525 442 aa6.45□□□□□ -1.38
CST9YLR394W MAK16P10962 306 aaPredicted RBP6.44□□□□□ -1.38
CST9YLR394W RPP2BP02400 110 aaKnown RBP6.43□□□□□ -1.38
CST9YLR394W DLD3P39976 496 aaKnown RBP6.43□□□□□ -1.38
CST9YLR394W CCT8P47079 568 aaKnown RBP6.42□□□□□ -1.38
CST9YLR394W NAF1P53919 492 aaKnown RBP6.42□□□□□ -1.38
CST9YLR394W FRA1Q07825 749 aa6.42□□□□□ -1.38
CST9YLR394W HPC2Q01448 625 aa6.41□□□□□ -1.38
CST9YLR394W STE20Q03497 939 aaKnown RBP6.41□□□□□ -1.38
CST9YLR394W UBP15P50101 1230 aa6.4□□□□□ -1.39
CST9YLR394W DIT1P21623 536 aa6.39□□□□□ -1.39
CST9YLR394W TFB3Q03290 321 aa6.39□□□□□ -1.39
CST9YLR394W SYT1Q06836 1226 aa6.39□□□□□ -1.39
CST9YLR394W MSN5P52918 1224 aa6.38□□□□□ -1.39
CST9YLR394W ADE12P80210 433 aaKnown RBP6.38□□□□□ -1.39
CST9YLR394W YMR265CQ03508 461 aaKnown RBP6.38□□□□□ -1.39
CST9YLR394W PKC1P24583 1151 aa6.37□□□□□ -1.39
CST9YLR394W NRD1P53617 575 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
CST9YLR394W YPR053CQ6Q5F3 151 aa6.37□□□□□ -1.39
CST9YLR394W SLA1P32790 1244 aa6.36□□□□□ -1.39
CST9YLR394W SSN3P39073 555 aa6.36□□□□□ -1.39
CST9YLR394W YDR461C-AQ2V2P7 80 aa6.36□□□□□ -1.39
CST9YLR394W WTM2Q12206 467 aa6.35□□□□□ -1.39
CST9YLR394W CSE4P36012 229 aa6.34□□□□□ -1.39
CST9YLR394W KRE33P53914 1056 aaKnown RBP6.34□□□□□ -1.39
CST9YLR394W SPT2P06843 333 aaPredicted RBP6.33□□□□□ -1.4
CST9YLR394W TY1A-DR3Q12441 440 aa6.33□□□□□ -1.4
CST9YLR394W SKN7P38889 622 aa6.33□□□□□ -1.4
CST9YLR394W MRX12P47084 519 aa6.33□□□□□ -1.4
CST9YLR394W SBE2P42223 864 aaKnown RBP6.31□□□□□ -1.4
CST9YLR394W APL6P46682 809 aa6.31□□□□□ -1.4
CST9YLR394W ISR1Q06098 443 aaKnown RBP6.31□□□□□ -1.4
CST9YLR394W TDA6Q06466 467 aa6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms