RNA–Protein interactions for RNA: YLR249W

YEF3, Transcript of Gamma subunit of translational elongation factor eEF1B, yeast

Gene YEF3, Length 3,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEF3	YLR249W	FPR4	Q06205	392 aa	Predicted RBP	2.99	□□□□□ -1.93
YEF3	YLR249W	URB1	P34241	1764 aa	Known RBP	2.99	□□□□□ -1.93
YEF3	YLR249W	RAD9	P14737	1309 aa		2.98	□□□□□ -1.93
YEF3	YLR249W	RNA1	P11745	407 aa	Known RBP	2.98	□□□□□ -1.93
YEF3	YLR249W	RPN1	P38764	993 aa	Known RBP	2.98	□□□□□ -1.93
YEF3	YLR249W	VPS27	P40343	622 aa	Known RBP	2.98	□□□□□ -1.93
YEF3	YLR249W	KIP3	P53086	805 aa	Known RBP	2.98	□□□□□ -1.93
YEF3	YLR249W	PRP43	P53131	767 aa	Known RBP	2.98	□□□□□ -1.93
YEF3	YLR249W	TAP42	Q04372	366 aa		2.98	□□□□□ -1.93
YEF3	YLR249W	ADE6	P38972	1358 aa	Known RBP	2.98	□□□□□ -1.93
YEF3	YLR249W	MRM1	P25270	412 aa		2.98	□□□□□ -1.93
YEF3	YLR249W	HIF1	Q12373	385 aa		2.98	□□□□□ -1.93
YEF3	YLR249W	LEU3	P08638	886 aa		2.97	□□□□□ -1.93
YEF3	YLR249W	DAL5	P15365	543 aa		2.97	□□□□□ -1.93
YEF3	YLR249W	TYS1	P36421	394 aa	Known RBP	2.97	□□□□□ -1.93
YEF3	YLR249W	KRE5	P22023	1365 aa		2.97	□□□□□ -1.93
YEF3	YLR249W	TCB2	P48231	1178 aa		2.97	□□□□□ -1.93
YEF3	YLR249W	EDS1	P38073	919 aa		2.96	□□□□□ -1.94
YEF3	YLR249W	NHA1	Q99271	985 aa		2.96	□□□□□ -1.94
YEF3	YLR249W	DOS2	P54858	310 aa		2.96	□□□□□ -1.94
YEF3	YLR249W	LAM6	Q08001	693 aa		2.96	□□□□□ -1.94
YEF3	YLR249W	AUS1	Q08409	1394 aa		2.95	□□□□□ -1.94
YEF3	YLR249W	YEF3	P16521	1044 aa	Known RBP	2.95	□□□□□ -1.94
YEF3	YLR249W	SOL3	P38858	249 aa		2.95	□□□□□ -1.94
YEF3	YLR249W	YIR014W	P40570	242 aa		2.95	□□□□□ -1.94
YEF3	YLR249W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	2.95	□□□□□ -1.94	not detected
YEF3	YLR249W	RPO41	P13433	1351 aa	Known RBP	2.95	□□□□□ -1.94
YEF3	YLR249W	FPR3	P38911	411 aa	Known RBP	2.95	□□□□□ -1.94
YEF3	YLR249W	FUN12	P39730	1002 aa	Known RBP	2.95	□□□□□ -1.94
YEF3	YLR249W	YGR130C	P53278	816 aa		2.95	□□□□□ -1.94
YEF3	YLR249W	GAP1	P19145	602 aa	Predicted RBP	2.95	□□□□□ -1.94
YEF3	YLR249W	GRX4	P32642	244 aa		2.95	□□□□□ -1.94
YEF3	YLR249W	TAF8	Q03750	510 aa		2.95	□□□□□ -1.94
YEF3	YLR249W	LYS2	P07702	1392 aa		2.94	□□□□□ -1.94
YEF3	YLR249W	TAF13	P11747	167 aa		2.94	□□□□□ -1.94
YEF3	YLR249W	DSF2	P38213	736 aa		2.94	□□□□□ -1.94
YEF3	YLR249W	RLF2	Q12495	606 aa		2.94	□□□□□ -1.94
YEF3	YLR249W	MCM1	P11746	286 aa		2.94	□□□□□ -1.94
YEF3	YLR249W	YAP5	P40574	245 aa		2.94	□□□□□ -1.94
YEF3	YLR249W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.94	□□□□□ -1.94	not detected
YEF3	YLR249W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	2.94	□□□□□ -1.94	not detected
YEF3	YLR249W	YNL011C	P53980	444 aa		2.94	□□□□□ -1.94
YEF3	YLR249W	TLG1	Q03322	224 aa		2.94	□□□□□ -1.94
YEF3	YLR249W	ETT1	Q08421	412 aa	Known RBP	2.94	□□□□□ -1.94
YEF3	YLR249W	RPS0A	P32905	252 aa	Known RBP	2.93	□□□□□ -1.94
YEF3	YLR249W	SET1	P38827	1080 aa	Known RBP	2.93	□□□□□ -1.94
YEF3	YLR249W	SEC9	P40357	651 aa		2.93	□□□□□ -1.94
YEF3	YLR249W	YDR090C	Q03193	310 aa		2.93	□□□□□ -1.94
YEF3	YLR249W	MTR4	P47047	1073 aa	Known RBP	2.93	□□□□□ -1.94
YEF3	YLR249W	YMR196W	Q04336	1088 aa		2.93	□□□□□ -1.94
YEF3	YLR249W	COQ8	P27697	501 aa		2.93	□□□□□ -1.94
YEF3	YLR249W	MAK10	Q02197	733 aa		2.93	□□□□□ -1.94
YEF3	YLR249W	VMA1	P17255	1071 aa	Known RBP	2.92	□□□□□ -1.94
YEF3	YLR249W	GLN1	P32288	370 aa	Known RBP	2.92	□□□□□ -1.94
YEF3	YLR249W	DAN4	P47179	1161 aa		2.92	□□□□□ -1.94
YEF3	YLR249W	TY1B-A	O13527	1196 aa	Known RBP	2.92	□□□□□ -1.94
YEF3	YLR249W	CPS1	P27614	576 aa		2.92	□□□□□ -1.94
YEF3	YLR249W	CHZ1	P40019	153 aa	Predicted RBP	2.92	□□□□□ -1.94
YEF3	YLR249W	PDI1	P17967	522 aa	Known RBP	2.91	□□□□□ -1.94
YEF3	YLR249W	RVB2	Q12464	471 aa	Known RBP	2.91	□□□□□ -1.94
YEF3	YLR249W	HSP82	P02829	709 aa	Known RBP	2.91	□□□□□ -1.94
YEF3	YLR249W	SUI2	P20459	304 aa	Known RBP	2.91	□□□□□ -1.94
YEF3	YLR249W	UBP14	P38237	781 aa	Known RBP	2.91	□□□□□ -1.94
YEF3	YLR249W	YNR029C	P53729	429 aa	Known RBP	2.91	□□□□□ -1.94
YEF3	YLR249W	DMA2	P53924	522 aa		2.91	□□□□□ -1.94
YEF3	YLR249W	HEF3	P53978	1044 aa	Known RBP	2.91	□□□□□ -1.94
YEF3	YLR249W	CAB1	Q04430	367 aa		2.91	□□□□□ -1.94
YEF3	YLR249W	YRF1-3	P0CX14	1859 aa		2.91	□□□□□ -1.94
YEF3	YLR249W	YRF1-7	P0CX15	1859 aa		2.91	□□□□□ -1.94
YEF3	YLR249W	YRF1-6	P53819	1859 aa		2.91	□□□□□ -1.94
YEF3	YLR249W	UTP10	P42945	1769 aa	Known RBP	2.91	□□□□□ -1.94
YEF3	YLR249W	TRK1	P12685	1235 aa		2.9	□□□□□ -1.94
YEF3	YLR249W	PTC3	P34221	468 aa	Known RBP	2.9	□□□□□ -1.94
YEF3	YLR249W	RRP46	P53256	223 aa	Predicted RBP	2.9	□□□□□ -1.94
YEF3	YLR249W	VPS72	Q03388	795 aa		2.9	□□□□□ -1.94
YEF3	YLR249W	CEF1	Q03654	590 aa	Predicted RBP	2.9	□□□□□ -1.94
YEF3	YLR249W	LEU2	P04173	364 aa	Predicted RBP	2.9	□□□□□ -1.95
YEF3	YLR249W	DBP1	P24784	617 aa	Known RBP	2.9	□□□□□ -1.95
YEF3	YLR249W	MRX12	P47084	519 aa		2.9	□□□□□ -1.95
YEF3	YLR249W	ECM16	Q04217	1267 aa	Known RBP	2.9	□□□□□ -1.95
YEF3	YLR249W	YOR238W	Q08634	303 aa		2.9	□□□□□ -1.95
YEF3	YLR249W	RIM15	P43565	1770 aa		2.9	□□□□□ -1.95
YEF3	YLR249W	BRN1	P38170	754 aa		2.9	□□□□□ -1.95
YEF3	YLR249W	BRL1	P38770	471 aa		2.9	□□□□□ -1.95
YEF3	YLR249W	RTF1	P53064	558 aa		2.9	□□□□□ -1.95
YEF3	YLR249W	CTF4	Q01454	927 aa		2.9	□□□□□ -1.95
YEF3	YLR249W	YDL144C	Q07589	356 aa		2.9	□□□□□ -1.95
YEF3	YLR249W	IOC2	Q12072	812 aa		2.9	□□□□□ -1.95
YEF3	YLR249W	PPH3	P32345	308 aa		2.89	□□□□□ -1.95
YEF3	YLR249W	SPC110	P32380	944 aa		2.89	□□□□□ -1.95
YEF3	YLR249W	PRD1	P25375	712 aa		2.89	□□□□□ -1.95
YEF3	YLR249W	NUP42	P49686	430 aa	Known RBP	2.89	□□□□□ -1.95
YEF3	YLR249W	YSH1	Q06224	779 aa	Predicted RBP	2.89	□□□□□ -1.95
YEF3	YLR249W	MSB4	Q12317	492 aa		2.89	□□□□□ -1.95
YEF3	YLR249W	COX6	P00427	148 aa		2.88	□□□□□ -1.95
YEF3	YLR249W	SPT16	P32558	1035 aa	Known RBP	2.88	□□□□□ -1.95
YEF3	YLR249W	RRP14	P36080	434 aa	Known RBP	2.88	□□□□□ -1.95
YEF3	YLR249W	LEM3	P42838	414 aa		2.88	□□□□□ -1.95
YEF3	YLR249W	HGH1	P48362	394 aa	Known RBP	2.88	□□□□□ -1.95
YEF3	YLR249W	NOP8	Q08287	484 aa	Predicted RBP	2.88	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms