RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C KIP2P28743 706 aa7.64□□□□□ -1.19
SMD3YLR147C IXR1P33417 597 aa7.64□□□□□ -1.19
SMD3YLR147C MET32Q12041 191 aa7.64□□□□□ -1.19
SMD3YLR147C ATG32P40458 529 aa7.63□□□□□ -1.19
SMD3YLR147C YNL108CP53929 270 aa7.63□□□□□ -1.19
SMD3YLR147C ITT1Q04638 464 aa7.63□□□□□ -1.19
SMD3YLR147C TRK1P12685 1235 aa7.61□□□□□ -1.19
SMD3YLR147C GUT2P32191 649 aa7.6□□□□□ -1.19
SMD3YLR147C MRT4P33201 236 aaKnown RBP7.6□□□□□ -1.19
SMD3YLR147C ENO2P00925 437 aaKnown RBP7.59□□□□□ -1.19
SMD3YLR147C FRA1Q07825 749 aa7.59□□□□□ -1.19
SMD3YLR147C MCM16Q12262 181 aa7.59□□□□□ -1.19
SMD3YLR147C TIF1P10081 395 aaKnown RBP7.57□□□□□ -1.2
SMD3YLR147C ISF1P32488 338 aa7.57□□□□□ -1.2
SMD3YLR147C STE20Q03497 939 aaKnown RBP7.57□□□□□ -1.2
SMD3YLR147C ASH1P34233 588 aa7.56□□□□□ -1.2
SMD3YLR147C EMW1P42842 904 aaKnown RBP7.56□□□□□ -1.2
SMD3YLR147C EMP47P43555 445 aa7.56□□□□□ -1.2
SMD3YLR147C AFT1P22149 690 aa7.55□□□□□ -1.2
SMD3YLR147C RIM21P48565 533 aa7.54□□□□□ -1.2
SMD3YLR147C APP1P53933 587 aa7.54□□□□□ -1.2
SMD3YLR147C APL6P46682 809 aa7.53□□□□□ -1.2
SMD3YLR147C MRX12P47084 519 aa7.53□□□□□ -1.2
SMD3YLR147C RPL34BP40525 121 aaKnown RBP7.52□□□□□ -1.21
SMD3YLR147C YPP1P46951 817 aa7.52□□□□□ -1.21
SMD3YLR147C MRX10Q05648 414 aa7.52□□□□□ -1.21
SMD3YLR147C RTG2P32608 588 aaKnown RBP7.51□□□□□ -1.21
SMD3YLR147C YBL086CP38177 466 aa7.51□□□□□ -1.21
SMD3YLR147C HST3P53687 447 aa7.51□□□□□ -1.21
SMD3YLR147C ENO1P00924 437 aaKnown RBP7.49□□□□□ -1.21
SMD3YLR147C RDS2P19541 446 aaKnown RBP7.49□□□□□ -1.21
SMD3YLR147C MSB3P48566 633 aaPredicted RBP7.49□□□□□ -1.21
SMD3YLR147C MKS1P34072 584 aa7.47□□□□□ -1.21
SMD3YLR147C BRE2P43132 505 aa7.47□□□□□ -1.21
SMD3YLR147C ATG20Q07528 640 aa7.47□□□□□ -1.21
SMD3YLR147C YPR204WQ08995 1032 aa7.47□□□□□ -1.21
SMD3YLR147C UGA3P26370 528 aa7.46□□□□□ -1.22
SMD3YLR147C RTT106P40161 455 aa7.46□□□□□ -1.22
SMD3YLR147C YJR115WP47152 169 aa7.46□□□□□ -1.22
SMD3YLR147C FBP26P32604 452 aa7.44□□□□□ -1.22
SMD3YLR147C DFG5Q05031 458 aa7.44□□□□□ -1.22
SMD3YLR147C UTP13Q05946 817 aaKnown RBP7.44□□□□□ -1.22
SMD3YLR147C PEP12P32854 288 aa7.43□□□□□ -1.22
SMD3YLR147C SOH1P38633 127 aa7.43□□□□□ -1.22
SMD3YLR147C HAL5P38970 855 aaKnown RBP7.43□□□□□ -1.22
SMD3YLR147C GCR2Q01722 534 aa7.43□□□□□ -1.22
SMD3YLR147C ISR1Q06098 443 aaKnown RBP7.43□□□□□ -1.22
SMD3YLR147C STE6P12866 1290 aa7.42□□□□□ -1.22
SMD3YLR147C ISU1Q03020 165 aa7.42□□□□□ -1.22
SMD3YLR147C ENV9Q08651 330 aa7.42□□□□□ -1.22
SMD3YLR147C ATG3P40344 310 aa7.41□□□□□ -1.22
SMD3YLR147C PTK2P47116 818 aaKnown RBP7.41□□□□□ -1.22
SMD3YLR147C RLF2Q12495 606 aa7.41□□□□□ -1.22
SMD3YLR147C TTI1P36097 1038 aa7.4□□□□□ -1.22
SMD3YLR147C AAD14P42884 376 aa7.39□□□□□ -1.23
SMD3YLR147C BDS1Q08347 646 aa7.38□□□□□ -1.23
SMD3YLR147C SPT2P06843 333 aaPredicted RBP7.37□□□□□ -1.23
SMD3YLR147C ARG82P07250 355 aa7.37□□□□□ -1.23
SMD3YLR147C HDA3Q06623 655 aa7.36□□□□□ -1.23
SMD3YLR147C NUP85P46673 744 aa7.35□□□□□ -1.23
SMD3YLR147C SRF1Q12516 437 aa7.35□□□□□ -1.23
SMD3YLR147C MET22P32179 357 aa7.34□□□□□ -1.23
SMD3YLR147C SIS2P36024 562 aa7.34□□□□□ -1.23
SMD3YLR147C UTR2P32623 467 aa7.33□□□□□ -1.24
SMD3YLR147C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
SMD3YLR147C WTM2Q12206 467 aa7.33□□□□□ -1.24
SMD3YLR147C MIP1P15801 1254 aa7.32□□□□□ -1.24
SMD3YLR147C CPS1P27614 576 aa7.32□□□□□ -1.24
SMD3YLR147C DAT1P13483 248 aaKnown RBP7.31□□□□□ -1.24
SMD3YLR147C SLX8P40072 274 aa7.31□□□□□ -1.24
SMD3YLR147C KTR7P40504 517 aa7.31□□□□□ -1.24
SMD3YLR147C DLD1P32891 587 aa7.3□□□□□ -1.24
SMD3YLR147C TGL4P36165 910 aa7.3□□□□□ -1.24
SMD3YLR147C TAF7Q05021 590 aa7.3□□□□□ -1.24
SMD3YLR147C RPP2BP02400 110 aaKnown RBP7.29□□□□□ -1.24
SMD3YLR147C YJR098CP47139 656 aa7.29□□□□□ -1.24
SMD3YLR147C OPT2Q06593 877 aa7.29□□□□□ -1.24
SMD3YLR147C TBS1P38114 1094 aa7.28□□□□□ -1.24
SMD3YLR147C LSC2P53312 427 aa7.28□□□□□ -1.24
SMD3YLR147C YDR444WQ04093 687 aa7.28□□□□□ -1.24
SMD3YLR147C LCB5Q06147 687 aaKnown RBP7.28□□□□□ -1.24
SMD3YLR147C TSC13Q99190 310 aa7.28□□□□□ -1.24
SMD3YLR147C GAL2P13181 574 aa7.27□□□□□ -1.25
SMD3YLR147C PDI1P17967 522 aaKnown RBP7.27□□□□□ -1.25
SMD3YLR147C PHO87P25360 923 aa7.27□□□□□ -1.25
SMD3YLR147C AIM9P40053 627 aaKnown RBP7.27□□□□□ -1.25
SMD3YLR147C ACS2P52910 683 aaKnown RBP7.27□□□□□ -1.25
SMD3YLR147C PUP1P25043 261 aa7.26□□□□□ -1.25
SMD3YLR147C DLD3P39976 496 aaKnown RBP7.26□□□□□ -1.25
SMD3YLR147C SWI5P08153 709 aa7.25□□□□□ -1.25
SMD3YLR147C YFL034WP43564 1073 aa7.25□□□□□ -1.25
SMD3YLR147C SSA4P22202 642 aaKnown RBP7.24□□□□□ -1.25
SMD3YLR147C NTH2P35172 780 aa7.24□□□□□ -1.25
SMD3YLR147C GLY1P37303 387 aaKnown RBP7.24□□□□□ -1.25
SMD3YLR147C UTP7P40055 554 aaKnown RBP7.24□□□□□ -1.25
SMD3YLR147C YLR346CQ06139 101 aa7.24□□□□□ -1.25
SMD3YLR147C TCB1Q12466 1186 aa7.24□□□□□ -1.25
SMD3YLR147C RPS6AP0CX37 236 aaKnown RBP7.23□□□□□ -1.25
SMD3YLR147C RPS6BP0CX38 236 aaPredicted RBP7.23□□□□□ -1.25
SMD3YLR147C SSN3P39073 555 aa7.23□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms