RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	YPP1	P46951	817 aa		3.39	□□□□□ -1.87
RIC1	YLR039C	FRA1	Q07825	749 aa		3.39	□□□□□ -1.87
RIC1	YLR039C	SPT23	P35210	1082 aa		3.38	□□□□□ -1.87
RIC1	YLR039C	PTC2	P39966	464 aa	Known RBP	3.38	□□□□□ -1.87
RIC1	YLR039C	ALR1	Q08269	859 aa		3.38	□□□□□ -1.87
RIC1	YLR039C	HAT1	Q12341	374 aa		3.38	□□□□□ -1.87
RIC1	YLR039C	UBX7	P38349	436 aa		3.38	□□□□□ -1.87
RIC1	YLR039C	ENV9	Q08651	330 aa		3.38	□□□□□ -1.87
RIC1	YLR039C	GAL2	P13181	574 aa		3.37	□□□□□ -1.87
RIC1	YLR039C	SSF1	P38789	453 aa	Predicted RBP	3.37	□□□□□ -1.87
RIC1	YLR039C	APL6	P46682	809 aa		3.37	□□□□□ -1.87
RIC1	YLR039C	SOH1	P38633	127 aa		3.37	□□□□□ -1.87
RIC1	YLR039C	HXT10	P43581	546 aa		3.37	□□□□□ -1.87
RIC1	YLR039C	MRX12	P47084	519 aa		3.37	□□□□□ -1.87
RIC1	YLR039C	STE20	Q03497	939 aa	Known RBP	3.37	□□□□□ -1.87
RIC1	YLR039C	HAL5	P38970	855 aa	Known RBP	3.36	□□□□□ -1.87
RIC1	YLR039C	SEN54	Q02825	467 aa	Predicted RBP	3.36	□□□□□ -1.87
RIC1	YLR039C	YML082W	Q04533	649 aa	Known RBP	3.36	□□□□□ -1.87
RIC1	YLR039C	MOD5	P07884	428 aa		3.36	□□□□□ -1.87
RIC1	YLR039C	GUT2	P32191	649 aa		3.36	□□□□□ -1.87
RIC1	YLR039C	PRE3	P38624	215 aa		3.36	□□□□□ -1.87
RIC1	YLR039C	VAC17	P25591	423 aa		3.35	□□□□□ -1.87
RIC1	YLR039C	ACS2	P52910	683 aa	Known RBP	3.35	□□□□□ -1.87
RIC1	YLR039C	ROM1	P53046	1155 aa		3.35	□□□□□ -1.87
RIC1	YLR039C	KXD1	P53158	218 aa		3.35	□□□□□ -1.87
RIC1	YLR039C	RRD1	P40454	393 aa	Known RBP	3.35	□□□□□ -1.87
RIC1	YLR039C	IXR1	P33417	597 aa		3.34	□□□□□ -1.87
RIC1	YLR039C	YEL077C	Q3E7X8	1277 aa		3.34	□□□□□ -1.87
RIC1	YLR039C	SDH2	P21801	266 aa		3.33	□□□□□ -1.88
RIC1	YLR039C	SPT16	P32558	1035 aa	Known RBP	3.33	□□□□□ -1.88
RIC1	YLR039C	BMT6	Q12291	365 aa		3.33	□□□□□ -1.88
RIC1	YLR039C	PDI1	P17967	522 aa	Known RBP	3.33	□□□□□ -1.88
RIC1	YLR039C	PHO87	P25360	923 aa		3.33	□□□□□ -1.88
RIC1	YLR039C	CWC15	Q03772	175 aa	Known RBP	3.33	□□□□□ -1.88
RIC1	YLR039C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	3.33	□□□□□ -1.88	not detected
RIC1	YLR039C	YBL113C	Q7M4S9	792 aa		3.33	□□□□□ -1.88
RIC1	YLR039C	TPD3	P31383	635 aa		3.33	□□□□□ -1.88
RIC1	YLR039C	ERP5	P38819	212 aa		3.33	□□□□□ -1.88
RIC1	YLR039C	IPL1	P38991	367 aa		3.33	□□□□□ -1.88
RIC1	YLR039C	ISR1	Q06098	443 aa	Known RBP	3.33	□□□□□ -1.88
RIC1	YLR039C	PUS5	Q06244	254 aa		3.33	□□□□□ -1.88
RIC1	YLR039C	MIP1	P15801	1254 aa		3.32	□□□□□ -1.88
RIC1	YLR039C	CHL1	P22516	861 aa	Predicted RBP	3.32	□□□□□ -1.88
RIC1	YLR039C	PAT1	P25644	796 aa	Known RBP	3.32	□□□□□ -1.88
RIC1	YLR039C	TRL1	P09880	827 aa	Known RBP	3.31	□□□□□ -1.88
RIC1	YLR039C	APP1	P53933	587 aa		3.31	□□□□□ -1.88
RIC1	YLR039C	BOL3	P39724	118 aa		3.31	□□□□□ -1.88
RIC1	YLR039C	UTP13	Q05946	817 aa	Known RBP	3.31	□□□□□ -1.88
RIC1	YLR039C	GYP1	Q08484	637 aa		3.31	□□□□□ -1.88
RIC1	YLR039C	TSC13	Q99190	310 aa		3.31	□□□□□ -1.88
RIC1	YLR039C	HDA3	Q06623	655 aa		3.3	□□□□□ -1.88
RIC1	YLR039C	HAP4	P14064	554 aa		3.3	□□□□□ -1.88
RIC1	YLR039C	SLD2	P34252	453 aa		3.3	□□□□□ -1.88
RIC1	YLR039C	KAR5	Q04746	504 aa		3.3	□□□□□ -1.88
RIC1	YLR039C	SUV3	P32580	737 aa		3.3	□□□□□ -1.88
RIC1	YLR039C	MDJ2	P42834	146 aa		3.3	□□□□□ -1.88
RIC1	YLR039C	BDP1	P46678	594 aa		3.3	□□□□□ -1.88
RIC1	YLR039C	PNP1	Q05788	311 aa		3.3	□□□□□ -1.88
RIC1	YLR039C	ATG3	P40344	310 aa		3.29	□□□□□ -1.88
RIC1	YLR039C	CST6	P40535	587 aa		3.29	□□□□□ -1.88
RIC1	YLR039C	YJL171C	P46992	396 aa		3.29	□□□□□ -1.88
RIC1	YLR039C	ATG20	Q07528	640 aa		3.29	□□□□□ -1.88
RIC1	YLR039C	GRS1	P38088	690 aa	Known RBP	3.29	□□□□□ -1.88
RIC1	YLR039C	AIM9	P40053	627 aa	Known RBP	3.29	□□□□□ -1.88
RIC1	YLR039C	PUF6	Q04373	656 aa	Known RBP	3.29	□□□□□ -1.88
RIC1	YLR039C	PUN1	Q06991	263 aa		3.29	□□□□□ -1.88
RIC1	YLR039C	GAS4	Q08271	471 aa		3.28	□□□□□ -1.88
RIC1	YLR039C	KIP2	P28743	706 aa		3.28	□□□□□ -1.88
RIC1	YLR039C	RRN6	P32786	894 aa		3.28	□□□□□ -1.88
RIC1	YLR039C	FRK1	Q03002	865 aa	Predicted RBP	3.28	□□□□□ -1.88
RIC1	YLR039C	SAS4	Q04003	481 aa		3.28	□□□□□ -1.88
RIC1	YLR039C	NTH2	P35172	780 aa		3.28	□□□□□ -1.88
RIC1	YLR039C	YHL050C	P38721	697 aa		3.28	□□□□□ -1.88
RIC1	YLR039C	YHR219W	P38900	624 aa		3.28	□□□□□ -1.88
RIC1	YLR039C	WHI5	Q12416	295 aa		3.28	□□□□□ -1.88
RIC1	YLR039C	EMW1	P42842	904 aa	Known RBP	3.27	□□□□□ -1.89
RIC1	YLR039C	VRP1	P37370	817 aa		3.27	□□□□□ -1.89
RIC1	YLR039C	ALD4	P46367	519 aa	Known RBP	3.27	□□□□□ -1.89
RIC1	YLR039C	SRS2	P12954	1174 aa		3.26	□□□□□ -1.89
RIC1	YLR039C	ATE1	P16639	503 aa		3.26	□□□□□ -1.89
RIC1	YLR039C	HEM3	P28789	327 aa		3.26	□□□□□ -1.89
RIC1	YLR039C	BOI1	P38041	980 aa	Known RBP	3.26	□□□□□ -1.89
RIC1	YLR039C	MSC6	Q08818	692 aa	Known RBP	3.26	□□□□□ -1.89
RIC1	YLR039C	FRT1	Q99332	602 aa		3.26	□□□□□ -1.89
RIC1	YLR039C	SWI5	P08153	709 aa		3.26	□□□□□ -1.89
RIC1	YLR039C	STM1	P39015	273 aa	Known RBP	3.26	□□□□□ -1.89
RIC1	YLR039C	ALD2	P47771	506 aa		3.26	□□□□□ -1.89
RIC1	YLR039C	VAN1	P23642	535 aa		3.26	□□□□□ -1.89
RIC1	YLR039C	GLO3	P38682	493 aa	Known RBP	3.26	□□□□□ -1.89
RIC1	YLR039C	RPS6A	P0CX37	236 aa	Known RBP	3.25	□□□□□ -1.89
RIC1	YLR039C	RPS6B	P0CX38	236 aa	Predicted RBP	3.25	□□□□□ -1.89
RIC1	YLR039C	QDR1	P40475	563 aa		3.25	□□□□□ -1.89
RIC1	YLR039C	ISU1	Q03020	165 aa		3.25	□□□□□ -1.89
RIC1	YLR039C	ATG1	P53104	897 aa		3.25	□□□□□ -1.89
RIC1	YLR039C	SYH1	Q02875	849 aa	Known RBP	3.25	□□□□□ -1.89
RIC1	YLR039C	RRP15	Q06511	250 aa	Predicted RBP	3.25	□□□□□ -1.89
RIC1	YLR039C	FUR4	P05316	633 aa	Known RBP	3.24	□□□□□ -1.89
RIC1	YLR039C	PAM1	P37304	830 aa	Known RBP	3.24	□□□□□ -1.89
RIC1	YLR039C	CLA4	P48562	842 aa		3.24	□□□□□ -1.89
RIC1	YLR039C	NUT2	Q06213	157 aa		3.24	□□□□□ -1.89

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms