RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W RTT106P40161 455 aa4.13□□□□□ -1.75
TRM2YKR056W NOP8Q08287 484 aaPredicted RBP4.13□□□□□ -1.75
TRM2YKR056W CLB5P30283 435 aa4.13□□□□□ -1.75
TRM2YKR056W YML020WQ03722 664 aa4.13□□□□□ -1.75
TRM2YKR056W MRT4P33201 236 aaKnown RBP4.12□□□□□ -1.75
TRM2YKR056W IXR1P33417 597 aa4.12□□□□□ -1.75
TRM2YKR056W ROG3P43602 733 aa4.11□□□□□ -1.75
TRM2YKR056W PSE1P32337 1089 aaKnown RBP4.11□□□□□ -1.75
TRM2YKR056W NSG2P53898 299 aa4.11□□□□□ -1.75
TRM2YKR056W ARG82P07250 355 aa4.1□□□□□ -1.75
TRM2YKR056W HPC2Q01448 625 aa4.1□□□□□ -1.75
TRM2YKR056W PKC1P24583 1151 aa4.09□□□□□ -1.75
TRM2YKR056W LYS5P50113 272 aa4.09□□□□□ -1.75
TRM2YKR056W ORC1P54784 914 aaPredicted RBP4.09□□□□□ -1.75
TRM2YKR056W TFB3Q03290 321 aa4.09□□□□□ -1.75
TRM2YKR056W TY1A-MR1Q04215 440 aa4.09□□□□□ -1.75
TRM2YKR056W SUB2Q07478 446 aaKnown RBP4.09□□□□□ -1.76
TRM2YKR056W SLX8P40072 274 aa4.08□□□□□ -1.76
TRM2YKR056W AAD14P42884 376 aa4.08□□□□□ -1.76
TRM2YKR056W TCB1Q12466 1186 aa4.08□□□□□ -1.76
TRM2YKR056W HGH1P48362 394 aaKnown RBP4.07□□□□□ -1.76
TRM2YKR056W SIT4P20604 311 aa4.07□□□□□ -1.76
TRM2YKR056W GLN1P32288 370 aaKnown RBP4.07□□□□□ -1.76
TRM2YKR056W OSH7P38755 437 aa4.07□□□□□ -1.76
TRM2YKR056W CCT8P47079 568 aaKnown RBP4.07□□□□□ -1.76
TRM2YKR056W YJR098CP47139 656 aa4.07□□□□□ -1.76
TRM2YKR056W ALR1Q08269 859 aa4.07□□□□□ -1.76
TRM2YKR056W SBP1P10080 294 aaKnown RBP4.06□□□□□ -1.76
TRM2YKR056W DLD1P32891 587 aa4.06□□□□□ -1.76
TRM2YKR056W THI72Q08579 599 aa4.06□□□□□ -1.76
TRM2YKR056W ATF2P53296 535 aa4.05□□□□□ -1.76
TRM2YKR056W CCP1P00431 361 aa4.05□□□□□ -1.76
TRM2YKR056W SSA1P10591 642 aaKnown RBP4.05□□□□□ -1.76
TRM2YKR056W GEF1P37020 779 aa4.05□□□□□ -1.76
TRM2YKR056W JJJ3P47138 172 aa4.05□□□□□ -1.76
TRM2YKR056W RPA14P50106 137 aa4.04□□□□□ -1.76
TRM2YKR056W BIM1P40013 344 aa4.03□□□□□ -1.76
TRM2YKR056W YPR097WQ06839 1073 aa4.03□□□□□ -1.76
TRM2YKR056W SLY41P22215 453 aa4.03□□□□□ -1.76
TRM2YKR056W KTR1P27810 393 aaKnown RBP4.03□□□□□ -1.76
TRM2YKR056W NIS1P53939 407 aa4.03□□□□□ -1.76
TRM2YKR056W TBF1Q02457 562 aa4.03□□□□□ -1.76
TRM2YKR056W YDL206WQ12424 762 aa4.03□□□□□ -1.76
TRM2YKR056W ATG32P40458 529 aa4.02□□□□□ -1.77
TRM2YKR056W TEA1P47988 759 aa4.02□□□□□ -1.77
TRM2YKR056W AI1P03875 834 aa4.01□□□□□ -1.77
TRM2YKR056W SCJ1P25303 377 aa4□□□□□ -1.77
TRM2YKR056W YBL086CP38177 466 aa4□□□□□ -1.77
TRM2YKR056W YFL066CP43538 392 aa4□□□□□ -1.77
TRM2YKR056W YJL007CP47080 104 aa4□□□□□ -1.77
TRM2YKR056W IOC4Q04213 475 aa4□□□□□ -1.77
TRM2YKR056W MRX12P47084 519 aa3.99□□□□□ -1.77
TRM2YKR056W PUS6P53294 404 aa3.99□□□□□ -1.77
TRM2YKR056W CSN12P47130 423 aa3.99□□□□□ -1.77
TRM2YKR056W FPK1P53739 893 aa3.99□□□□□ -1.77
TRM2YKR056W YPR053CQ6Q5F3 151 aa3.99□□□□□ -1.77
TRM2YKR056W BRL1P38770 471 aa3.98□□□□□ -1.77
TRM2YKR056W TIF1P10081 395 aaKnown RBP3.97□□□□□ -1.77
TRM2YKR056W NAP1P25293 417 aaKnown RBP3.97□□□□□ -1.77
TRM2YKR056W NOB1Q08444 459 aaKnown RBP3.97□□□□□ -1.77
TRM2YKR056W AIM44Q99299 758 aa3.96□□□□□ -1.78
TRM2YKR056W SSA2P10592 639 aaKnown RBP3.95□□□□□ -1.78
TRM2YKR056W YMR196WQ04336 1088 aa3.95□□□□□ -1.78
TRM2YKR056W SSA4P22202 642 aaKnown RBP3.95□□□□□ -1.78
TRM2YKR056W CPS1P27614 576 aa3.95□□□□□ -1.78
TRM2YKR056W TTI1P36097 1038 aa3.95□□□□□ -1.78
TRM2YKR056W APP1P53933 587 aa3.95□□□□□ -1.78
TRM2YKR056W NAM8Q00539 523 aaKnown RBP3.95□□□□□ -1.78
TRM2YKR056W ESS1P22696 170 aa3.94□□□□□ -1.78
TRM2YKR056W YJU3P28321 313 aa3.94□□□□□ -1.78
TRM2YKR056W HST2P53686 357 aa3.94□□□□□ -1.78
TRM2YKR056W TRM1P15565 570 aaKnown RBP3.93□□□□□ -1.78
TRM2YKR056W SEN54Q02825 467 aaPredicted RBP3.93□□□□□ -1.78
TRM2YKR056W CDC19P00549 500 aaKnown RBP3.93□□□□□ -1.78
TRM2YKR056W VAC17P25591 423 aa3.93□□□□□ -1.78
TRM2YKR056W BIO2P32451 375 aa3.93□□□□□ -1.78
TRM2YKR056W PAM1P37304 830 aaKnown RBP3.92□□□□□ -1.78
TRM2YKR056W RSC30P38781 883 aa3.92□□□□□ -1.78
TRM2YKR056W SKN7P38889 622 aa3.92□□□□□ -1.78
TRM2YKR056W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
TRM2YKR056W YMR187CQ03236 431 aa3.91□□□□□ -1.78
TRM2YKR056W YML083CQ04526 418 aa3.91□□□□□ -1.78
TRM2YKR056W MMP1Q12372 583 aa3.91□□□□□ -1.78
TRM2YKR056W RTG2P32608 588 aaKnown RBP3.91□□□□□ -1.78
TRM2YKR056W CEM1P39525 442 aa3.91□□□□□ -1.78
TRM2YKR056W CUZ1P53899 274 aa3.91□□□□□ -1.78
TRM2YKR056W PUP1P25043 261 aa3.9□□□□□ -1.78
TRM2YKR056W SSF1P38789 453 aaPredicted RBP3.9□□□□□ -1.78
TRM2YKR056W EMW1P42842 904 aaKnown RBP3.9□□□□□ -1.78
TRM2YKR056W ITT1Q04638 464 aa3.9□□□□□ -1.78
TRM2YKR056W SUP45P12385 437 aaKnown RBP3.89□□□□□ -1.79
TRM2YKR056W TDA6Q06466 467 aa3.89□□□□□ -1.79
TRM2YKR056W CDC3P32457 520 aaKnown RBP3.89□□□□□ -1.79
TRM2YKR056W RRN6P32786 894 aa3.89□□□□□ -1.79
TRM2YKR056W YNL108CP53929 270 aa3.89□□□□□ -1.79
TRM2YKR056W ADE12P80210 433 aaKnown RBP3.89□□□□□ -1.79
TRM2YKR056W YBL036CP38197 257 aa3.88□□□□□ -1.79
TRM2YKR056W SBE2P42223 864 aaKnown RBP3.88□□□□□ -1.79
TRM2YKR056W PKH3Q03306 898 aaPredicted RBP3.88□□□□□ -1.79
TRM2YKR056W DFG5Q05031 458 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms