RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W SYH1Q02875 849 aaKnown RBP8.07□□□□□ -1.12
PTM1YKL039W HED1Q03937 162 aa8.07□□□□□ -1.12
PTM1YKL039W TAF7Q05021 590 aa8.06□□□□□ -1.12
PTM1YKL039W KIP2P28743 706 aa8.05□□□□□ -1.12
PTM1YKL039W RPL34BP40525 121 aaKnown RBP8.05□□□□□ -1.12
PTM1YKL039W GUT2P32191 649 aa8.05□□□□□ -1.12
PTM1YKL039W IXR1P33417 597 aa8.05□□□□□ -1.12
PTM1YKL039W AIR1P40507 360 aaKnown RBP8.05□□□□□ -1.12
PTM1YKL039W FRA1Q07825 749 aa8.05□□□□□ -1.12
PTM1YKL039W RIM21P48565 533 aa8.04□□□□□ -1.12
PTM1YKL039W ITT1Q04638 464 aa8.03□□□□□ -1.12
PTM1YKL039W ISF1P32488 338 aa8.02□□□□□ -1.13
PTM1YKL039W YPP1P46951 817 aa8.02□□□□□ -1.13
PTM1YKL039W SRC1Q03707 834 aa8.02□□□□□ -1.13
PTM1YKL039W EMP47P43555 445 aa8.01□□□□□ -1.13
PTM1YKL039W STE20Q03497 939 aaKnown RBP8.01□□□□□ -1.13
PTM1YKL039W CDC4P07834 779 aa8.01□□□□□ -1.13
PTM1YKL039W RTG2P32608 588 aaKnown RBP8.01□□□□□ -1.13
PTM1YKL039W MET32Q12041 191 aa8.01□□□□□ -1.13
PTM1YKL039W RLF2Q12495 606 aa8.01□□□□□ -1.13
PTM1YKL039W MRT4P33201 236 aaKnown RBP7.99□□□□□ -1.13
PTM1YKL039W MRX10Q05648 414 aa7.99□□□□□ -1.13
PTM1YKL039W YPR204WQ08995 1032 aa7.99□□□□□ -1.13
PTM1YKL039W ENO1P00924 437 aaKnown RBP7.98□□□□□ -1.13
PTM1YKL039W MRX12P47084 519 aa7.98□□□□□ -1.13
PTM1YKL039W APL6P46682 809 aa7.97□□□□□ -1.13
PTM1YKL039W EMW1P42842 904 aaKnown RBP7.97□□□□□ -1.13
PTM1YKL039W RDS2P19541 446 aaKnown RBP7.96□□□□□ -1.14
PTM1YKL039W APP1P53933 587 aa7.96□□□□□ -1.14
PTM1YKL039W TRK1P12685 1235 aa7.95□□□□□ -1.14
PTM1YKL039W AFT1P22149 690 aa7.92□□□□□ -1.14
PTM1YKL039W YBL086CP38177 466 aa7.91□□□□□ -1.14
PTM1YKL039W ASH1P34233 588 aa7.9□□□□□ -1.14
PTM1YKL039W TTI1P36097 1038 aa7.9□□□□□ -1.14
PTM1YKL039W ATG3P40344 310 aa7.9□□□□□ -1.14
PTM1YKL039W PEP12P32854 288 aa7.89□□□□□ -1.15
PTM1YKL039W MKS1P34072 584 aa7.89□□□□□ -1.15
PTM1YKL039W SOH1P38633 127 aa7.89□□□□□ -1.15
PTM1YKL039W UTP13Q05946 817 aaKnown RBP7.89□□□□□ -1.15
PTM1YKL039W ATG20Q07528 640 aa7.89□□□□□ -1.15
PTM1YKL039W HST3P53687 447 aa7.88□□□□□ -1.15
PTM1YKL039W ENV9Q08651 330 aa7.88□□□□□ -1.15
PTM1YKL039W FBP26P32604 452 aa7.87□□□□□ -1.15
PTM1YKL039W SIS2P36024 562 aa7.87□□□□□ -1.15
PTM1YKL039W HAL5P38970 855 aaKnown RBP7.87□□□□□ -1.15
PTM1YKL039W MSB3P48566 633 aaPredicted RBP7.87□□□□□ -1.15
PTM1YKL039W ISR1Q06098 443 aaKnown RBP7.87□□□□□ -1.15
PTM1YKL039W CPS1P27614 576 aa7.84□□□□□ -1.15
PTM1YKL039W RTT106P40161 455 aa7.84□□□□□ -1.15
PTM1YKL039W DFG5Q05031 458 aa7.84□□□□□ -1.15
PTM1YKL039W UGA3P26370 528 aa7.84□□□□□ -1.15
PTM1YKL039W ISU1Q03020 165 aa7.84□□□□□ -1.15
PTM1YKL039W STE6P12866 1290 aa7.82□□□□□ -1.16
PTM1YKL039W BRE2P43132 505 aa7.82□□□□□ -1.16
PTM1YKL039W YJR115WP47152 169 aa7.81□□□□□ -1.16
PTM1YKL039W KTR7P40504 517 aa7.8□□□□□ -1.16
PTM1YKL039W SPT2P06843 333 aaPredicted RBP7.79□□□□□ -1.16
PTM1YKL039W SSA4P22202 642 aaKnown RBP7.79□□□□□ -1.16
PTM1YKL039W TGL4P36165 910 aa7.79□□□□□ -1.16
PTM1YKL039W PTK2P47116 818 aaKnown RBP7.79□□□□□ -1.16
PTM1YKL039W HDA3Q06623 655 aa7.79□□□□□ -1.16
PTM1YKL039W BDS1Q08347 646 aa7.79□□□□□ -1.16
PTM1YKL039W AAD14P42884 376 aa7.78□□□□□ -1.16
PTM1YKL039W MIP1P15801 1254 aa7.77□□□□□ -1.17
PTM1YKL039W UTR2P32623 467 aa7.77□□□□□ -1.17
PTM1YKL039W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17not detected
PTM1YKL039W SUB2Q07478 446 aaKnown RBP7.76□□□□□ -1.17
PTM1YKL039W PUP1P25043 261 aa7.76□□□□□ -1.17
PTM1YKL039W GCR2Q01722 534 aa7.76□□□□□ -1.17
PTM1YKL039W ARG82P07250 355 aa7.75□□□□□ -1.17
PTM1YKL039W GAL2P13181 574 aa7.74□□□□□ -1.17
PTM1YKL039W AIM9P40053 627 aaKnown RBP7.74□□□□□ -1.17
PTM1YKL039W SLX8P40072 274 aa7.74□□□□□ -1.17
PTM1YKL039W WTM2Q12206 467 aa7.74□□□□□ -1.17
PTM1YKL039W RPP2BP02400 110 aaKnown RBP7.73□□□□□ -1.17
PTM1YKL039W PHO87P25360 923 aa7.73□□□□□ -1.17
PTM1YKL039W ACS2P52910 683 aaKnown RBP7.73□□□□□ -1.17
PTM1YKL039W NOB1Q08444 459 aaKnown RBP7.73□□□□□ -1.17
PTM1YKL039W SRF1Q12516 437 aa7.73□□□□□ -1.17
PTM1YKL039W TSC13Q99190 310 aa7.72□□□□□ -1.17
PTM1YKL039W DAT1P13483 248 aaKnown RBP7.71□□□□□ -1.17
PTM1YKL039W PDI1P17967 522 aaKnown RBP7.71□□□□□ -1.17
PTM1YKL039W TBS1P38114 1094 aa7.71□□□□□ -1.18
PTM1YKL039W YFL034WP43564 1073 aa7.71□□□□□ -1.18
PTM1YKL039W NUP85P46673 744 aa7.71□□□□□ -1.18
PTM1YKL039W ECM23Q02710 187 aa7.71□□□□□ -1.18
PTM1YKL039W YML083CQ04526 418 aa7.71□□□□□ -1.18
PTM1YKL039W HAP4P14064 554 aa7.69□□□□□ -1.18
PTM1YKL039W DLD1P32891 587 aa7.69□□□□□ -1.18
PTM1YKL039W DLD3P39976 496 aaKnown RBP7.69□□□□□ -1.18
PTM1YKL039W SWI5P08153 709 aa7.68□□□□□ -1.18
PTM1YKL039W ROM1P53046 1155 aa7.68□□□□□ -1.18
PTM1YKL039W GAS4Q08271 471 aa7.68□□□□□ -1.18
PTM1YKL039W RPS6AP0CX37 236 aaKnown RBP7.67□□□□□ -1.18
PTM1YKL039W RPS6BP0CX38 236 aaPredicted RBP7.67□□□□□ -1.18
PTM1YKL039W YJR098CP47139 656 aa7.67□□□□□ -1.18
PTM1YKL039W NTH2P35172 780 aa7.67□□□□□ -1.18
PTM1YKL039W UBX7P38349 436 aa7.66□□□□□ -1.18
PTM1YKL039W UTP7P40055 554 aaKnown RBP7.65□□□□□ -1.18
PTM1YKL039W LSC2P53312 427 aa7.65□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms