RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C OSM1P21375 501 aaKnown RBP12.4□□□□□ -0.42
MET28YIR017C MPP10P47083 593 aaKnown RBP12.4□□□□□ -0.42
MET28YIR017C SNF2P22082 1703 aa12.4□□□□□ -0.43
MET28YIR017C YKR075CP36155 307 aa12.39□□□□□ -0.43
MET28YIR017C YNL050CP53952 270 aa12.38□□□□□ -0.43
MET28YIR017C NUP145P49687 1317 aa12.37□□□□□ -0.43
MET28YIR017C KCC4P25389 1037 aa12.36□□□□□ -0.43
MET28YIR017C VPS27P40343 622 aaKnown RBP12.36□□□□□ -0.43
MET28YIR017C YBP2P53169 641 aa12.36□□□□□ -0.43
MET28YIR017C NPR2P39923 615 aa12.35□□□□□ -0.43
MET28YIR017C THI22Q06490 572 aa12.35□□□□□ -0.43
MET28YIR017C UGA3P26370 528 aa12.34□□□□□ -0.43
MET28YIR017C ZDS1P50111 915 aaKnown RBP12.34□□□□□ -0.43
MET28YIR017C GRX1P25373 110 aaKnown RBP12.33□□□□□ -0.44
MET28YIR017C MAM1P40065 302 aa12.33□□□□□ -0.44
MET28YIR017C NSE3Q05541 303 aa12.33□□□□□ -0.44
MET28YIR017C CDC45Q08032 650 aa12.33□□□□□ -0.44
MET28YIR017C TPD3P31383 635 aa12.31□□□□□ -0.44
MET28YIR017C SAP155P43612 1002 aa12.31□□□□□ -0.44
MET28YIR017C MSB4Q12317 492 aa12.31□□□□□ -0.44
MET28YIR017C NSR1P27476 414 aaKnown RBP RIP-Chip data12.3□□□□□ -0.44not detected
MET28YIR017C RTT109Q07794 436 aa12.3□□□□□ -0.44
MET28YIR017C LYS4P49367 693 aaPredicted RBP12.29□□□□□ -0.44
MET28YIR017C RMT2Q03305 412 aa12.29□□□□□ -0.44
MET28YIR017C ALD2P47771 506 aa12.28□□□□□ -0.44
MET28YIR017C GYP7P48365 746 aa12.28□□□□□ -0.44
MET28YIR017C SUI2P20459 304 aaKnown RBP12.27□□□□□ -0.45
MET28YIR017C GTT3P39996 337 aa12.27□□□□□ -0.45
MET28YIR017C RRT14P40470 206 aa12.27□□□□□ -0.45
MET28YIR017C ALE1Q08548 619 aa12.27□□□□□ -0.45
MET28YIR017C PRS1P32895 427 aaKnown RBP12.26□□□□□ -0.45
MET28YIR017C HEF3P53978 1044 aaKnown RBP12.26□□□□□ -0.45
MET28YIR017C UGA2P38067 497 aa12.25□□□□□ -0.45
MET28YIR017C YBL086CP38177 466 aa12.25□□□□□ -0.45
MET28YIR017C BMS1Q08965 1183 aaKnown RBP12.25□□□□□ -0.45
MET28YIR017C RAD4P14736 754 aa12.24□□□□□ -0.45
MET28YIR017C YFR016CP43597 1233 aaKnown RBP12.24□□□□□ -0.45
MET28YIR017C YRB30P53107 440 aaPredicted RBP12.24□□□□□ -0.45
MET28YIR017C YBR287WP38355 427 aa12.23□□□□□ -0.45
MET28YIR017C MDG1P53885 366 aa12.23□□□□□ -0.45
MET28YIR017C TUM1Q08686 304 aaKnown RBP12.23□□□□□ -0.45
MET28YIR017C GRE2Q12068 342 aaKnown RBP12.23□□□□□ -0.45
MET28YIR017C NOP53Q12080 455 aaKnown RBP12.23□□□□□ -0.45
MET28YIR017C RVB2Q12464 471 aaKnown RBP12.23□□□□□ -0.45
MET28YIR017C COQ4O13525 335 aa12.22□□□□□ -0.45
MET28YIR017C BUG1Q12191 341 aa12.22□□□□□ -0.45
MET28YIR017C LYS2P07702 1392 aa12.21□□□□□ -0.45
MET28YIR017C BDF1P35817 686 aa12.21□□□□□ -0.45
MET28YIR017C SSA2P10592 639 aaKnown RBP12.2□□□□□ -0.46
MET28YIR017C SSP2Q08646 371 aa12.19□□□□□ -0.46
MET28YIR017C MAK21Q12176 1025 aaKnown RBP12.19□□□□□ -0.46
MET28YIR017C CTH1P47976 325 aa12.18□□□□□ -0.46
MET28YIR017C ALD3P54114 506 aa12.18□□□□□ -0.46
MET28YIR017C SRT1Q03175 343 aa12.17□□□□□ -0.46
MET28YIR017C PHM7Q12252 991 aa12.17□□□□□ -0.46
MET28YIR017C RIM15P43565 1770 aa12.16□□□□□ -0.46
MET28YIR017C RPG1P38249 964 aaKnown RBP12.16□□□□□ -0.46
MET28YIR017C BUD27P43573 796 aaKnown RBP RIP-Chip data12.16□□□□□ -0.46not detected
MET28YIR017C UTP22P53254 1237 aaPredicted RBP12.16□□□□□ -0.46
MET28YIR017C YOL057WQ08225 711 aa12.16□□□□□ -0.46
MET28YIR017C TEA1P47988 759 aa12.15□□□□□ -0.46
MET28YIR017C NAB6Q03735 1134 aaKnown RBP RIP-Chip data12.14□□□□□ -0.47not detected
MET28YIR017C SER1P33330 395 aaKnown RBP12.13□□□□□ -0.47
MET28YIR017C NYV1Q12255 253 aa12.13□□□□□ -0.47
MET28YIR017C ZDS2P54786 942 aa12.11□□□□□ -0.47
MET28YIR017C DNM1P54861 757 aa12.11□□□□□ -0.47
MET28YIR017C VPS64Q03944 604 aa12.11□□□□□ -0.47
MET28YIR017C RAD2P07276 1031 aa12.1□□□□□ -0.47
MET28YIR017C YGL082WP53155 381 aa12.09□□□□□ -0.47
MET28YIR017C HPC2Q01448 625 aa12.09□□□□□ -0.47
MET28YIR017C NOP8Q08287 484 aaPredicted RBP12.09□□□□□ -0.47
MET28YIR017C DAL5P15365 543 aa12.08□□□□□ -0.48
MET28YIR017C MRP7P12687 371 aa12.07□□□□□ -0.48
MET28YIR017C APL2P36000 726 aaPredicted RBP12.07□□□□□ -0.48
MET28YIR017C CST6P40535 587 aa12.07□□□□□ -0.48
MET28YIR017C TOS1P38288 455 aa12.06□□□□□ -0.48
MET28YIR017C YIL092WP40497 633 aa12.06□□□□□ -0.48
MET28YIR017C YPP1P46951 817 aa12.06□□□□□ -0.48
MET28YIR017C YDR306CQ06640 478 aa12.06□□□□□ -0.48
MET28YIR017C YPR204WQ08995 1032 aa12.06□□□□□ -0.48
MET28YIR017C LPD1P09624 499 aaKnown RBP12.05□□□□□ -0.48
MET28YIR017C ARG8P18544 423 aa12.05□□□□□ -0.48
MET28YIR017C FUN12P39730 1002 aaKnown RBP12.04□□□□□ -0.48
MET28YIR017C PKH1Q03407 766 aa12.04□□□□□ -0.48
MET28YIR017C CTI6Q08923 506 aa12.04□□□□□ -0.48
MET28YIR017C TFA1P36100 482 aa12.03□□□□□ -0.48
MET28YIR017C NUP133P36161 1157 aa12.03□□□□□ -0.48
MET28YIR017C RAT1Q02792 1006 aaKnown RBP12.03□□□□□ -0.48
MET28YIR017C YLR271WQ06152 274 aa12.02□□□□□ -0.49
MET28YIR017C SWI1P09547 1314 aa12.02□□□□□ -0.49
MET28YIR017C DCD1P06773 312 aa12.01□□□□□ -0.49
MET28YIR017C RIX7Q07844 837 aaKnown RBP12.01□□□□□ -0.49
MET28YIR017C YJR008WP47085 338 aa12□□□□□ -0.49
MET28YIR017C CSI1Q04368 295 aa12□□□□□ -0.49
MET28YIR017C DIB1Q06819 143 aaPredicted RBP12□□□□□ -0.49
MET28YIR017C RAD24P32641 659 aa11.99□□□□□ -0.49
MET28YIR017C YGR122WP53272 402 aa11.98□□□□□ -0.49
MET28YIR017C HAT1Q12341 374 aa11.98□□□□□ -0.49
MET28YIR017C RPS19AP07280 144 aaKnown RBP11.97□□□□□ -0.49
MET28YIR017C RPS19BP07281 144 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms