RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C RRT14P40470 206 aa3.75□□□□□ -1.81
NMD2YHR077C BUD27P43573 796 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
NMD2YHR077C GYP7P48365 746 aa3.75□□□□□ -1.81
NMD2YHR077C YDR306CQ06640 478 aa3.75□□□□□ -1.81
NMD2YHR077C INP54Q08227 384 aaKnown RBP3.75□□□□□ -1.81
NMD2YHR077C PRP5P21372 849 aaPredicted RBP3.75□□□□□ -1.81
NMD2YHR077C RCR1P38212 213 aa3.75□□□□□ -1.81
NMD2YHR077C CSI1Q04368 295 aa3.75□□□□□ -1.81
NMD2YHR077C RPS19AP07280 144 aaKnown RBP3.75□□□□□ -1.81
NMD2YHR077C RPS19BP07281 144 aaPredicted RBP3.75□□□□□ -1.81
NMD2YHR077C YGR122WP53272 402 aa3.75□□□□□ -1.81
NMD2YHR077C RSF2P46974 1380 aa3.74□□□□□ -1.81
NMD2YHR077C RPL17AP05740 184 aaKnown RBP3.74□□□□□ -1.81
NMD2YHR077C RAD24P32641 659 aa3.74□□□□□ -1.81
NMD2YHR077C MAM1P40065 302 aa3.74□□□□□ -1.81
NMD2YHR077C YPP1P46951 817 aa3.74□□□□□ -1.81
NMD2YHR077C RPL17BP46990 184 aaKnown RBP3.74□□□□□ -1.81
NMD2YHR077C PUF6Q04373 656 aaKnown RBP3.74□□□□□ -1.81
NMD2YHR077C HSP104P31539 908 aaKnown RBP3.73□□□□□ -1.81
NMD2YHR077C ZDS1P50111 915 aaKnown RBP3.73□□□□□ -1.81
NMD2YHR077C BMS1Q08965 1183 aaKnown RBP3.73□□□□□ -1.81
NMD2YHR077C GCD7P32502 381 aaPredicted RBP3.73□□□□□ -1.81
NMD2YHR077C RPG1P38249 964 aaKnown RBP3.73□□□□□ -1.81
NMD2YHR077C CTF4Q01454 927 aa3.73□□□□□ -1.81
NMD2YHR077C ISW2Q08773 1120 aa3.73□□□□□ -1.81
NMD2YHR077C FAS2P19097 1887 aaKnown RBP3.72□□□□□ -1.81
NMD2YHR077C PCT1P13259 424 aa3.72□□□□□ -1.81
NMD2YHR077C YJR008WP47085 338 aa3.72□□□□□ -1.81
NMD2YHR077C ADE16P54113 591 aaKnown RBP3.72□□□□□ -1.81
NMD2YHR077C ZDS2P54786 942 aa3.72□□□□□ -1.81
NMD2YHR077C CDC16P09798 840 aa3.72□□□□□ -1.81
NMD2YHR077C PRP45P28004 379 aaPredicted RBP3.72□□□□□ -1.81
NMD2YHR077C XKS1P42826 600 aa3.72□□□□□ -1.81
NMD2YHR077C YOL057WQ08225 711 aa3.72□□□□□ -1.81
NMD2YHR077C SWI1P09547 1314 aa3.72□□□□□ -1.81
NMD2YHR077C MAK21Q12176 1025 aaKnown RBP3.71□□□□□ -1.81
NMD2YHR077C YBR287WP38355 427 aa3.71□□□□□ -1.82
NMD2YHR077C AOS1Q06624 347 aa3.71□□□□□ -1.82
NMD2YHR077C REB1P21538 810 aa3.71□□□□□ -1.82
NMD2YHR077C BOI2P39969 1040 aa3.71□□□□□ -1.82
NMD2YHR077C SPO1P53541 631 aa3.7□□□□□ -1.82
NMD2YHR077C NKP2Q06162 153 aa3.7□□□□□ -1.82
NMD2YHR077C ROM2P51862 1356 aaKnown RBP3.7□□□□□ -1.82
NMD2YHR077C DCD1P06773 312 aa3.7□□□□□ -1.82
NMD2YHR077C KTR3P38130 404 aaPredicted RBP3.7□□□□□ -1.82
NMD2YHR077C FPR3P38911 411 aaKnown RBP3.7□□□□□ -1.82
NMD2YHR077C RAD4P14736 754 aa3.69□□□□□ -1.82
NMD2YHR077C KCC4P25389 1037 aa3.69□□□□□ -1.82
NMD2YHR077C UGA3P26370 528 aa3.69□□□□□ -1.82
NMD2YHR077C HXT10P43581 546 aa3.69□□□□□ -1.82
NMD2YHR077C YFR016CP43597 1233 aaKnown RBP3.69□□□□□ -1.82
NMD2YHR077C TCB1Q12466 1186 aa3.69□□□□□ -1.82
NMD2YHR077C SWC3P31376 625 aa3.69□□□□□ -1.82
NMD2YHR077C TRL1P09880 827 aaKnown RBP3.69□□□□□ -1.82
NMD2YHR077C OSM1P21375 501 aaKnown RBP3.69□□□□□ -1.82
NMD2YHR077C BRN1P38170 754 aa3.69□□□□□ -1.82
NMD2YHR077C YNG2P38806 282 aaKnown RBP3.69□□□□□ -1.82
NMD2YHR077C SET1P38827 1080 aaKnown RBP3.69□□□□□ -1.82
NMD2YHR077C ALE1Q08548 619 aa3.69□□□□□ -1.82
NMD2YHR077C RAD50P12753 1312 aa3.69□□□□□ -1.82
NMD2YHR077C FIG2P25653 1609 aa3.68□□□□□ -1.82
NMD2YHR077C ARG8P18544 423 aa3.68□□□□□ -1.82
NMD2YHR077C TUM1Q08686 304 aaKnown RBP3.68□□□□□ -1.82
NMD2YHR077C SNF7P39929 240 aaKnown RBP3.68□□□□□ -1.82
NMD2YHR077C HXT17P53631 564 aa3.68□□□□□ -1.82
NMD2YHR077C GCR2Q01722 534 aa3.68□□□□□ -1.82
NMD2YHR077C YPR204WQ08995 1032 aa3.68□□□□□ -1.82
NMD2YHR077C HKR1P41809 1802 aa3.68□□□□□ -1.82
NMD2YHR077C MRP7P12687 371 aa3.68□□□□□ -1.82
NMD2YHR077C HXT13P39924 564 aa3.68□□□□□ -1.82
NMD2YHR077C ROX1P25042 368 aa3.67□□□□□ -1.82
NMD2YHR077C DLD1P32891 587 aa3.67□□□□□ -1.82
NMD2YHR077C ENT1Q12518 454 aa3.67□□□□□ -1.82
NMD2YHR077C PMD1P32634 1753 aa3.67□□□□□ -1.82
NMD2YHR077C KNS1P32350 737 aaPredicted RBP3.67□□□□□ -1.82
NMD2YHR077C ENV9Q08651 330 aa3.67□□□□□ -1.82
NMD2YHR077C LPD1P09624 499 aaKnown RBP3.66□□□□□ -1.82
NMD2YHR077C YKR075CP36155 307 aa3.66□□□□□ -1.82
NMD2YHR077C IES2P40154 320 aa3.66□□□□□ -1.82
NMD2YHR077C FRK1Q03002 865 aaPredicted RBP3.66□□□□□ -1.82
NMD2YHR077C YPR148CQ06523 435 aa3.66□□□□□ -1.82
NMD2YHR077C LSP1Q12230 341 aaKnown RBP3.66□□□□□ -1.82
NMD2YHR077C APP1P53933 587 aa3.66□□□□□ -1.82
NMD2YHR077C FOX2Q02207 900 aaKnown RBP3.66□□□□□ -1.82
NMD2YHR077C NSE3Q05541 303 aa3.66□□□□□ -1.82
NMD2YHR077C SLN1P39928 1220 aaPredicted RBP3.66□□□□□ -1.82
NMD2YHR077C DJP1P40564 432 aa3.66□□□□□ -1.82
NMD2YHR077C CLC1P17891 233 aa3.65□□□□□ -1.82
NMD2YHR077C MBR1P23493 339 aa3.65□□□□□ -1.82
NMD2YHR077C MIF2P35201 549 aa3.65□□□□□ -1.82
NMD2YHR077C APL2P36000 726 aaPredicted RBP3.65□□□□□ -1.82
NMD2YHR077C UBP12P39538 1254 aa3.65□□□□□ -1.82
NMD2YHR077C KRE33P53914 1056 aaKnown RBP3.65□□□□□ -1.82
NMD2YHR077C RLF2Q12495 606 aa3.65□□□□□ -1.82
NMD2YHR077C MSP1P28737 362 aa3.65□□□□□ -1.83
NMD2YHR077C CST6P40535 587 aa3.65□□□□□ -1.83
NMD2YHR077C DOT5P40553 215 aa3.65□□□□□ -1.83
NMD2YHR077C NPA3P47122 385 aa3.65□□□□□ -1.83
NMD2YHR077C YAH1Q12184 172 aaKnown RBP3.65□□□□□ -1.83
NMD2YHR077C PIB2P53191 635 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms