RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W NUP85P46673 744 aa5.56□□□□□ -1.52
SSF1YHR066W SCW11P53189 542 aa5.56□□□□□ -1.52
SSF1YHR066W SSA2P10592 639 aaKnown RBP5.55□□□□□ -1.52
SSF1YHR066W HPC2Q01448 625 aa5.55□□□□□ -1.52
SSF1YHR066W PKH3Q03306 898 aaPredicted RBP5.55□□□□□ -1.52
SSF1YHR066W MIP1P15801 1254 aa5.54□□□□□ -1.52
SSF1YHR066W DMA2P53924 522 aa5.54□□□□□ -1.52
SSF1YHR066W RSC30P38781 883 aa5.53□□□□□ -1.52
SSF1YHR066W ICP55P40051 511 aa5.53□□□□□ -1.52
SSF1YHR066W TFB3Q03290 321 aa5.53□□□□□ -1.52
SSF1YHR066W TRM1P15565 570 aaKnown RBP5.52□□□□□ -1.53
SSF1YHR066W MRT4P33201 236 aaKnown RBP5.52□□□□□ -1.53
SSF1YHR066W LSB3P43603 459 aaKnown RBP5.52□□□□□ -1.53
SSF1YHR066W RAD59Q12223 238 aa5.52□□□□□ -1.53
SSF1YHR066W PUS6P53294 404 aa5.51□□□□□ -1.53
SSF1YHR066W YPR204WQ08995 1032 aa5.51□□□□□ -1.53
SSF1YHR066W PKC1P24583 1151 aa5.5□□□□□ -1.53
SSF1YHR066W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
SSF1YHR066W ARG8P18544 423 aa5.49□□□□□ -1.53
SSF1YHR066W KIP2P28743 706 aa5.49□□□□□ -1.53
SSF1YHR066W PUS1Q12211 544 aaKnown RBP5.49□□□□□ -1.53
SSF1YHR066W BRL1P38770 471 aa5.48□□□□□ -1.53
SSF1YHR066W YDL206WQ12424 762 aa5.48□□□□□ -1.53
SSF1YHR066W TBF1Q02457 562 aa5.47□□□□□ -1.53
SSF1YHR066W IXR1P33417 597 aa5.46□□□□□ -1.54
SSF1YHR066W RTT106P40161 455 aa5.45□□□□□ -1.54
SSF1YHR066W RPA14P50106 137 aa5.45□□□□□ -1.54
SSF1YHR066W LSC2P53312 427 aa5.44□□□□□ -1.54
SSF1YHR066W YPR097WQ06839 1073 aa5.44□□□□□ -1.54
SSF1YHR066W AAD14P42884 376 aa5.43□□□□□ -1.54
SSF1YHR066W ROG3P43602 733 aa5.43□□□□□ -1.54
SSF1YHR066W UBP2Q01476 1272 aa5.43□□□□□ -1.54
SSF1YHR066W ALR1Q08269 859 aa5.43□□□□□ -1.54
SSF1YHR066W DPH6Q12429 685 aa5.43□□□□□ -1.54
SSF1YHR066W CCP1P00431 361 aa5.42□□□□□ -1.54
SSF1YHR066W MDJ1P35191 511 aa5.42□□□□□ -1.54
SSF1YHR066W YBL036CP38197 257 aa5.42□□□□□ -1.54
SSF1YHR066W PHM7Q12252 991 aa5.42□□□□□ -1.54
SSF1YHR066W MAK16P10962 306 aaPredicted RBP5.42□□□□□ -1.54
SSF1YHR066W YJR098CP47139 656 aa5.42□□□□□ -1.54
SSF1YHR066W HGH1P48362 394 aaKnown RBP5.42□□□□□ -1.54
SSF1YHR066W NRD1P53617 575 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
SSF1YHR066W TY1A-MR1Q04215 440 aa5.42□□□□□ -1.54
SSF1YHR066W ARG82P07250 355 aa5.41□□□□□ -1.54
SSF1YHR066W CSE4P36012 229 aa5.41□□□□□ -1.54
SSF1YHR066W BIO2P32451 375 aa5.4□□□□□ -1.55
SSF1YHR066W DLD1P32891 587 aa5.4□□□□□ -1.55
SSF1YHR066W YJL007CP47080 104 aa5.39□□□□□ -1.55
SSF1YHR066W TCB1Q12466 1186 aa5.39□□□□□ -1.55
SSF1YHR066W YBL086CP38177 466 aa5.38□□□□□ -1.55
SSF1YHR066W OSH7P38755 437 aa5.38□□□□□ -1.55
SSF1YHR066W BIM1P40013 344 aa5.38□□□□□ -1.55
SSF1YHR066W YDJ1P25491 409 aaKnown RBP5.37□□□□□ -1.55
SSF1YHR066W ATG32P40458 529 aa5.37□□□□□ -1.55
SSF1YHR066W FIG4P42837 879 aa5.36□□□□□ -1.55
SSF1YHR066W JJJ3P47138 172 aa5.36□□□□□ -1.55
SSF1YHR066W LYS5P50113 272 aa5.36□□□□□ -1.55
SSF1YHR066W VAC17P25591 423 aa5.35□□□□□ -1.55
SSF1YHR066W NAF1P53919 492 aaKnown RBP5.35□□□□□ -1.55
SSF1YHR066W SUP45P12385 437 aaKnown RBP5.34□□□□□ -1.55
SSF1YHR066W SPT5P27692 1063 aaKnown RBP5.34□□□□□ -1.55
SSF1YHR066W YNL108CP53929 270 aa5.34□□□□□ -1.55
SSF1YHR066W YPR084WQ06821 456 aa5.34□□□□□ -1.55
SSF1YHR066W NSG2P53898 299 aa5.33□□□□□ -1.56
SSF1YHR066W ITT1Q04638 464 aa5.33□□□□□ -1.56
SSF1YHR066W TIF1P10081 395 aaKnown RBP5.32□□□□□ -1.56
SSF1YHR066W TEC1P18412 486 aa5.32□□□□□ -1.56
SSF1YHR066W CCT8P47079 568 aaKnown RBP5.32□□□□□ -1.56
SSF1YHR066W ENO2P00925 437 aaKnown RBP5.31□□□□□ -1.56
SSF1YHR066W YFL066CP43538 392 aa5.31□□□□□ -1.56
SSF1YHR066W MCM16Q12262 181 aa5.3□□□□□ -1.56
SSF1YHR066W ISF1P32488 338 aa5.29□□□□□ -1.56
SSF1YHR066W GUT2P32191 649 aa5.29□□□□□ -1.56
SSF1YHR066W EMP47P43555 445 aa5.29□□□□□ -1.56
SSF1YHR066W APP1P53933 587 aa5.29□□□□□ -1.56
SSF1YHR066W NAM8Q00539 523 aaKnown RBP5.29□□□□□ -1.56
SSF1YHR066W FRA1Q07825 749 aa5.29□□□□□ -1.56
SSF1YHR066W THI72Q08579 599 aa5.29□□□□□ -1.56
SSF1YHR066W RTG2P32608 588 aaKnown RBP5.28□□□□□ -1.56
SSF1YHR066W RPL34BP40525 121 aaKnown RBP5.28□□□□□ -1.56
SSF1YHR066W RIM21P48565 533 aa5.28□□□□□ -1.56
SSF1YHR066W EMW1P42842 904 aaKnown RBP5.27□□□□□ -1.57
SSF1YHR066W STE20Q03497 939 aaKnown RBP5.27□□□□□ -1.57
SSF1YHR066W TAF7Q05021 590 aa5.27□□□□□ -1.57
SSF1YHR066W MRX10Q05648 414 aa5.27□□□□□ -1.57
SSF1YHR066W ENO1P00924 437 aaKnown RBP5.26□□□□□ -1.57
SSF1YHR066W RLF2Q12495 606 aa5.26□□□□□ -1.57
SSF1YHR066W CDC19P00549 500 aaKnown RBP5.25□□□□□ -1.57
SSF1YHR066W AI1P03875 834 aa5.25□□□□□ -1.57
SSF1YHR066W RDS2P19541 446 aaKnown RBP5.25□□□□□ -1.57
SSF1YHR066W APL6P46682 809 aa5.25□□□□□ -1.57
SSF1YHR066W YPP1P46951 817 aa5.25□□□□□ -1.57
SSF1YHR066W MRX12P47084 519 aa5.23□□□□□ -1.57
SSF1YHR066W YPR053CQ6Q5F3 151 aa5.21□□□□□ -1.58
SSF1YHR066W PEP12P32854 288 aa5.2□□□□□ -1.58
SSF1YHR066W CUZ1P53899 274 aa5.2□□□□□ -1.58
SSF1YHR066W DFG5Q05031 458 aa5.2□□□□□ -1.58
SSF1YHR066W TTI1P36097 1038 aa5.19□□□□□ -1.58
SSF1YHR066W SOH1P38633 127 aa5.19□□□□□ -1.58
SSF1YHR066W HAL5P38970 855 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms