RNA–Protein interactions for RNA: YGR245C

SDA1, Transcript of Protein required for actin organization and passage through Start, yeastyeast

Gene SDA1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDA1YGR245C RIM21P48565 533 aa6.97□□□□□ -1.29
SDA1YGR245C YBL113CQ7M4S9 792 aa6.97□□□□□ -1.29
SDA1YGR245C DOS2P54858 310 aa6.96□□□□□ -1.29
SDA1YGR245C IQG1Q12280 1495 aa6.96□□□□□ -1.29
SDA1YGR245C DOP1Q03921 1698 aa6.96□□□□□ -1.29
SDA1YGR245C TOP1P04786 769 aa6.96□□□□□ -1.3
SDA1YGR245C ALD4P46367 519 aaKnown RBP6.96□□□□□ -1.3
SDA1YGR245C ATG36P46983 293 aa6.96□□□□□ -1.3
SDA1YGR245C PIB1Q06651 286 aa6.96□□□□□ -1.3
SDA1YGR245C VMA1P17255 1071 aaKnown RBP6.95□□□□□ -1.3
SDA1YGR245C ERP5P38819 212 aa6.95□□□□□ -1.3
SDA1YGR245C MVP1P40959 511 aaKnown RBP6.95□□□□□ -1.3
SDA1YGR245C MMP1Q12372 583 aa6.95□□□□□ -1.3
SDA1YGR245C GRE2Q12068 342 aaKnown RBP6.95□□□□□ -1.3
SDA1YGR245C ASF1P32447 279 aa6.94□□□□□ -1.3
SDA1YGR245C MSC6Q08818 692 aaKnown RBP6.94□□□□□ -1.3
SDA1YGR245C PEP12P32854 288 aa6.93□□□□□ -1.3
SDA1YGR245C SIS2P36024 562 aa6.93□□□□□ -1.3
SDA1YGR245C LAM6Q08001 693 aa6.93□□□□□ -1.3
SDA1YGR245C GEA1P47102 1408 aaPredicted RBP6.93□□□□□ -1.3
SDA1YGR245C PDR10P51533 1564 aa6.92□□□□□ -1.3
SDA1YGR245C TPS3P38426 1054 aaKnown RBP6.92□□□□□ -1.3
SDA1YGR245C TRL1P09880 827 aaKnown RBP6.92□□□□□ -1.3
SDA1YGR245C RDS2P19541 446 aaKnown RBP6.92□□□□□ -1.3
SDA1YGR245C SEC20P28791 383 aa6.92□□□□□ -1.3
SDA1YGR245C NST1P53935 1240 aa6.92□□□□□ -1.3
SDA1YGR245C ECM23Q02710 187 aa6.92□□□□□ -1.3
SDA1YGR245C ARG8P18544 423 aa6.91□□□□□ -1.3
SDA1YGR245C RSC30P38781 883 aa6.91□□□□□ -1.3
SDA1YGR245C GAP1P19145 602 aaPredicted RBP6.9□□□□□ -1.3
SDA1YGR245C SLX5P32828 619 aaKnown RBP6.9□□□□□ -1.3
SDA1YGR245C UBP10P53874 792 aaPredicted RBP6.9□□□□□ -1.3
SDA1YGR245C YMR196WQ04336 1088 aa6.9□□□□□ -1.3
SDA1YGR245C WHI5Q12416 295 aa6.9□□□□□ -1.3
SDA1YGR245C NUP157P40064 1391 aaKnown RBP6.9□□□□□ -1.3
SDA1YGR245C MMS1Q06211 1407 aa6.9□□□□□ -1.31
SDA1YGR245C CLB5P30283 435 aa6.9□□□□□ -1.31
SDA1YGR245C CST6P40535 587 aa6.9□□□□□ -1.31
SDA1YGR245C HAA1Q12753 694 aaKnown RBP6.9□□□□□ -1.31
SDA1YGR245C POL32P47110 350 aa6.89□□□□□ -1.31
SDA1YGR245C YBT1P32386 1661 aa6.89□□□□□ -1.31
SDA1YGR245C YHL050CP38721 697 aa6.89□□□□□ -1.31
SDA1YGR245C YHR219WP38900 624 aa6.89□□□□□ -1.31
SDA1YGR245C YEL077CQ3E7X8 1277 aa6.89□□□□□ -1.31
SDA1YGR245C MAK16P10962 306 aaPredicted RBP6.88□□□□□ -1.31
SDA1YGR245C MDJ2P42834 146 aa6.88□□□□□ -1.31
SDA1YGR245C SPT5P27692 1063 aaKnown RBP6.88□□□□□ -1.31
SDA1YGR245C SIT4P20604 311 aa6.87□□□□□ -1.31
SDA1YGR245C KTR7P40504 517 aa6.87□□□□□ -1.31
SDA1YGR245C NNF1P47149 201 aa6.87□□□□□ -1.31
SDA1YGR245C CHC1P22137 1653 aaKnown RBP6.87□□□□□ -1.31
SDA1YGR245C YAF9P53930 226 aa6.87□□□□□ -1.31
SDA1YGR245C FPR4Q06205 392 aaPredicted RBP6.87□□□□□ -1.31
SDA1YGR245C MAG2Q06436 670 aaKnown RBP6.87□□□□□ -1.31
SDA1YGR245C STB3Q12427 513 aa6.87□□□□□ -1.31
SDA1YGR245C TY3B-GQ99315 1547 aa6.86□□□□□ -1.31
SDA1YGR245C DNF2Q12675 1612 aa6.86□□□□□ -1.31
SDA1YGR245C SEC8P32855 1065 aa6.85□□□□□ -1.31
SDA1YGR245C ILV3P39522 585 aaKnown RBP6.85□□□□□ -1.31
SDA1YGR245C YPR109WQ06104 294 aa6.85□□□□□ -1.31
SDA1YGR245C ARO1P08566 1588 aaKnown RBP6.85□□□□□ -1.31
SDA1YGR245C UBX7P38349 436 aa6.84□□□□□ -1.31
SDA1YGR245C OYE2Q03558 400 aaKnown RBP6.84□□□□□ -1.31
SDA1YGR245C CWC15Q03772 175 aaKnown RBP6.84□□□□□ -1.31
SDA1YGR245C KAR5Q04746 504 aa6.84□□□□□ -1.31
SDA1YGR245C HAP1P0CE41 1502 aa6.84□□□□□ -1.32
SDA1YGR245C GRS1P38088 690 aaKnown RBP6.83□□□□□ -1.32
SDA1YGR245C NMD2P38798 1089 aaKnown RBP6.83□□□□□ -1.32
SDA1YGR245C SVF1Q05515 481 aa6.83□□□□□ -1.32
SDA1YGR245C SAM3Q08986 587 aa6.83□□□□□ -1.32
SDA1YGR245C PPX1P38698 397 aa6.82□□□□□ -1.32
SDA1YGR245C GAL2P13181 574 aa6.82□□□□□ -1.32
SDA1YGR245C RNH70P53331 553 aa6.82□□□□□ -1.32
SDA1YGR245C SEC7P11075 2009 aaKnown RBP6.81□□□□□ -1.32
SDA1YGR245C NUG1P40010 520 aaKnown RBP6.81□□□□□ -1.32
SDA1YGR245C YJR008WP47085 338 aa6.81□□□□□ -1.32
SDA1YGR245C JIP5Q06214 492 aaPredicted RBP6.81□□□□□ -1.32
SDA1YGR245C SRB8P25648 1427 aa6.8□□□□□ -1.32
SDA1YGR245C YOL098CQ12496 1037 aa6.8□□□□□ -1.32
SDA1YGR245C NSR1P27476 414 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
SDA1YGR245C MCM16Q12262 181 aa6.79□□□□□ -1.32
SDA1YGR245C CSC1Q06538 782 aa6.79□□□□□ -1.32
SDA1YGR245C GYP5Q12344 894 aa6.79□□□□□ -1.32
SDA1YGR245C YSP2Q06681 1438 aa6.79□□□□□ -1.32
SDA1YGR245C ISF1P32488 338 aa6.78□□□□□ -1.32
SDA1YGR245C BOL3P39724 118 aa6.78□□□□□ -1.32
SDA1YGR245C THI12P42883 340 aa6.78□□□□□ -1.32
SDA1YGR245C THI5P43534 340 aa6.78□□□□□ -1.32
SDA1YGR245C THI11P47183 340 aa6.78□□□□□ -1.32
SDA1YGR245C THI13Q07748 340 aa6.78□□□□□ -1.32
SDA1YGR245C IKI3Q06706 1349 aaKnown RBP6.78□□□□□ -1.32
SDA1YGR245C SLY41P22215 453 aa6.77□□□□□ -1.33
SDA1YGR245C YAP5P40574 245 aa6.77□□□□□ -1.33
SDA1YGR245C YJR107WP47145 328 aa6.77□□□□□ -1.33
SDA1YGR245C MET1P36150 593 aa6.77□□□□□ -1.33
SDA1YGR245C SLI15P38283 698 aa6.77□□□□□ -1.33
SDA1YGR245C RTS3P53289 263 aa6.77□□□□□ -1.33
SDA1YGR245C FRT1Q99332 602 aa6.77□□□□□ -1.33
SDA1YGR245C MPH3P0CE00 602 aa6.76□□□□□ -1.33
SDA1YGR245C SWE1P32944 819 aa6.76□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms