RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W ADE16P54113 591 aaKnown RBP6.97□□□□□ -1.29
SHE10YGL228W INP54Q08227 384 aaKnown RBP6.97□□□□□ -1.29
SHE10YGL228W FUN12P39730 1002 aaKnown RBP6.96□□□□□ -1.29
SHE10YGL228W FOX2Q02207 900 aaKnown RBP6.96□□□□□ -1.29
SHE10YGL228W FRK1Q03002 865 aaPredicted RBP6.96□□□□□ -1.29
SHE10YGL228W NUP145P49687 1317 aa6.96□□□□□ -1.3
SHE10YGL228W YNL050CP53952 270 aa6.94□□□□□ -1.3
SHE10YGL228W AOS1Q06624 347 aa6.94□□□□□ -1.3
SHE10YGL228W CTF4Q01454 927 aa6.93□□□□□ -1.3
SHE10YGL228W UTP10P42945 1769 aaKnown RBP6.93□□□□□ -1.3
SHE10YGL228W COBP00163 385 aa6.93□□□□□ -1.3
SHE10YGL228W TFA1P36100 482 aa6.93□□□□□ -1.3
SHE10YGL228W MEC3Q02574 474 aa6.93□□□□□ -1.3
SHE10YGL228W OSM1P21375 501 aaKnown RBP6.92□□□□□ -1.3
SHE10YGL228W GLN1P32288 370 aaKnown RBP6.92□□□□□ -1.3
SHE10YGL228W YKR075CP36155 307 aa6.91□□□□□ -1.3
SHE10YGL228W YBR287WP38355 427 aa6.91□□□□□ -1.3
SHE10YGL228W RRT14P40470 206 aa6.91□□□□□ -1.3
SHE10YGL228W KCC4P25389 1037 aa6.9□□□□□ -1.3
SHE10YGL228W RPN11P43588 306 aaKnown RBP6.9□□□□□ -1.3
SHE10YGL228W ZDS1P50111 915 aaKnown RBP6.9□□□□□ -1.3
SHE10YGL228W YMR074CQ04773 145 aa6.9□□□□□ -1.3
SHE10YGL228W GYP7P48365 746 aa6.9□□□□□ -1.31
SHE10YGL228W ATG13Q06628 738 aa6.9□□□□□ -1.31
SHE10YGL228W ALE1Q08548 619 aa6.9□□□□□ -1.31
SHE10YGL228W COQ4O13525 335 aa6.89□□□□□ -1.31
SHE10YGL228W MAM1P40065 302 aa6.89□□□□□ -1.31
SHE10YGL228W BMS1Q08965 1183 aaKnown RBP6.89□□□□□ -1.31
SHE10YGL228W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
SHE10YGL228W EDE1P34216 1381 aa6.87□□□□□ -1.31
SHE10YGL228W UGA3P26370 528 aa6.87□□□□□ -1.31
SHE10YGL228W YRB30P53107 440 aaPredicted RBP6.87□□□□□ -1.31
SHE10YGL228W SRT1Q03175 343 aa6.87□□□□□ -1.31
SHE10YGL228W LYS2P07702 1392 aa6.87□□□□□ -1.31
SHE10YGL228W NPR2P39923 615 aa6.87□□□□□ -1.31
SHE10YGL228W YIL092WP40497 633 aa6.87□□□□□ -1.31
SHE10YGL228W YBP2P53169 641 aa6.87□□□□□ -1.31
SHE10YGL228W TUM1Q08686 304 aaKnown RBP6.87□□□□□ -1.31
SHE10YGL228W DAL5P15365 543 aa6.86□□□□□ -1.31
SHE10YGL228W NSE3Q05541 303 aa6.86□□□□□ -1.31
SHE10YGL228W BUD31P25337 157 aaPredicted RBP6.85□□□□□ -1.31
SHE10YGL228W ZDS2P54786 942 aa6.85□□□□□ -1.31
SHE10YGL228W LAM6Q08001 693 aa6.85□□□□□ -1.31
SHE10YGL228W RAD4P14736 754 aa6.84□□□□□ -1.31
SHE10YGL228W PRP40P33203 583 aaKnown RBP6.84□□□□□ -1.31
SHE10YGL228W RMT2Q03305 412 aa6.84□□□□□ -1.31
SHE10YGL228W MAK21Q12176 1025 aaKnown RBP6.83□□□□□ -1.32
SHE10YGL228W RAD2P07276 1031 aa6.82□□□□□ -1.32
SHE10YGL228W GRX1P25373 110 aaKnown RBP6.82□□□□□ -1.32
SHE10YGL228W YJL181WP46987 611 aa6.82□□□□□ -1.32
SHE10YGL228W YGR122WP53272 402 aa6.82□□□□□ -1.32
SHE10YGL228W YOL057WQ08225 711 aa6.82□□□□□ -1.32
SHE10YGL228W LYS4P49367 693 aaPredicted RBP6.81□□□□□ -1.32
SHE10YGL228W NOP53Q12080 455 aaKnown RBP6.81□□□□□ -1.32
SHE10YGL228W TRP5P00931 707 aaKnown RBP6.8□□□□□ -1.32
SHE10YGL228W UBP1P25037 809 aa6.8□□□□□ -1.32
SHE10YGL228W APL2P36000 726 aaPredicted RBP6.8□□□□□ -1.32
SHE10YGL228W CSI1Q04368 295 aa6.8□□□□□ -1.32
SHE10YGL228W YDR306CQ06640 478 aa6.8□□□□□ -1.32
SHE10YGL228W MRP7P12687 371 aa6.79□□□□□ -1.32
SHE10YGL228W RAD24P32641 659 aa6.79□□□□□ -1.32
SHE10YGL228W ILV3P39522 585 aaKnown RBP6.79□□□□□ -1.32
SHE10YGL228W YPP1P46951 817 aa6.79□□□□□ -1.32
SHE10YGL228W POL32P47110 350 aa6.79□□□□□ -1.32
SHE10YGL228W VPS64Q03944 604 aa6.79□□□□□ -1.32
SHE10YGL228W MSB4Q12317 492 aa6.79□□□□□ -1.32
SHE10YGL228W ARG8P18544 423 aa6.79□□□□□ -1.32
SHE10YGL228W BUD27P43573 796 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
SHE10YGL228W GRE2Q12068 342 aaKnown RBP6.79□□□□□ -1.32
SHE10YGL228W SWI1P09547 1314 aa6.78□□□□□ -1.32
SHE10YGL228W DCD1P06773 312 aa6.78□□□□□ -1.32
SHE10YGL228W SSP2Q08646 371 aa6.78□□□□□ -1.32
SHE10YGL228W PMD1P32634 1753 aa6.77□□□□□ -1.32
SHE10YGL228W SWC3P31376 625 aa6.77□□□□□ -1.33
SHE10YGL228W CTH1P47976 325 aa6.77□□□□□ -1.33
SHE10YGL228W TEA1P47988 759 aa6.77□□□□□ -1.33
SHE10YGL228W PUF6Q04373 656 aaKnown RBP6.77□□□□□ -1.33
SHE10YGL228W YPR204WQ08995 1032 aa6.77□□□□□ -1.33
SHE10YGL228W NUP133P36161 1157 aa6.76□□□□□ -1.33
SHE10YGL228W PHM7Q12252 991 aa6.76□□□□□ -1.33
SHE10YGL228W RPS19AP07280 144 aaKnown RBP6.76□□□□□ -1.33
SHE10YGL228W RPS19BP07281 144 aaPredicted RBP6.76□□□□□ -1.33
SHE10YGL228W CST6P40535 587 aa6.76□□□□□ -1.33
SHE10YGL228W NOP2P40991 618 aaKnown RBP6.76□□□□□ -1.33
SHE10YGL228W YGL082WP53155 381 aa6.76□□□□□ -1.33
SHE10YGL228W DNM1P54861 757 aa6.76□□□□□ -1.33
SHE10YGL228W NYV1Q12255 253 aa6.76□□□□□ -1.33
SHE10YGL228W YFR016CP43597 1233 aaKnown RBP6.75□□□□□ -1.33
SHE10YGL228W NOP8Q08287 484 aaPredicted RBP6.75□□□□□ -1.33
SHE10YGL228W SER1P33330 395 aaKnown RBP6.74□□□□□ -1.33
SHE10YGL228W YNG2P38806 282 aaKnown RBP6.74□□□□□ -1.33
SHE10YGL228W BOI2P39969 1040 aa6.74□□□□□ -1.33
SHE10YGL228W SPO1P53541 631 aa6.74□□□□□ -1.33
SHE10YGL228W MDG1P53885 366 aa6.74□□□□□ -1.33
SHE10YGL228W DUR1,2P32528 1835 aaKnown RBP6.74□□□□□ -1.33
SHE10YGL228W YBL086CP38177 466 aa6.73□□□□□ -1.33
SHE10YGL228W FPR3P38911 411 aaKnown RBP6.73□□□□□ -1.33
SHE10YGL228W YJR008WP47085 338 aa6.73□□□□□ -1.33
SHE10YGL228W FCP1Q03254 732 aa6.73□□□□□ -1.33
SHE10YGL228W BUG1Q12191 341 aa6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms