RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C CSC1Q06538 782 aa4.05□□□□□ -1.76
XRN1YGL173C LAM6Q08001 693 aa4.05□□□□□ -1.76
XRN1YGL173C AI4P03878 556 aa4.05□□□□□ -1.76
XRN1YGL173C PUP1P25043 261 aa4.05□□□□□ -1.76
XRN1YGL173C RPL34AP87262 121 aaPredicted RBP4.05□□□□□ -1.76
XRN1YGL173C TFB4Q12004 338 aa4.05□□□□□ -1.76
XRN1YGL173C UBP1P25037 809 aa4.05□□□□□ -1.76
XRN1YGL173C APL6P46682 809 aa4.05□□□□□ -1.76
XRN1YGL173C YGR273CP53329 174 aa4.05□□□□□ -1.76
XRN1YGL173C BNI1P41832 1953 aa4.05□□□□□ -1.76
XRN1YGL173C ATG32P40458 529 aa4.04□□□□□ -1.76
XRN1YGL173C DPB3P27344 201 aa4.04□□□□□ -1.76
XRN1YGL173C TEA1P47988 759 aa4.04□□□□□ -1.76
XRN1YGL173C GCN2P15442 1659 aa4.04□□□□□ -1.76
XRN1YGL173C RTT106P40161 455 aa4.04□□□□□ -1.76
XRN1YGL173C ATG3P40344 310 aa4.04□□□□□ -1.76
XRN1YGL173C CEF1Q03654 590 aaPredicted RBP4.04□□□□□ -1.76
XRN1YGL173C ITT1Q04638 464 aa4.04□□□□□ -1.76
XRN1YGL173C CDC27P38042 758 aa4.03□□□□□ -1.76
XRN1YGL173C MFT1P33441 392 aaKnown RBP4.03□□□□□ -1.76
XRN1YGL173C RCR1P38212 213 aa4.03□□□□□ -1.76
XRN1YGL173C ENT3P47160 408 aa4.03□□□□□ -1.76
XRN1YGL173C SPT2P06843 333 aaPredicted RBP4.02□□□□□ -1.77
XRN1YGL173C STB3Q12427 513 aa4.02□□□□□ -1.77
XRN1YGL173C YOL098CQ12496 1037 aa4.02□□□□□ -1.77
XRN1YGL173C KTR1P27810 393 aaKnown RBP4.02□□□□□ -1.77
XRN1YGL173C BUD6P41697 788 aa4.02□□□□□ -1.77
XRN1YGL173C PIN2Q12057 282 aa4.02□□□□□ -1.77
XRN1YGL173C MRC1P25588 1096 aa4.02□□□□□ -1.77
XRN1YGL173C MST1P07236 462 aa4.02□□□□□ -1.77
XRN1YGL173C MPH3P0CE00 602 aa4.02□□□□□ -1.77
XRN1YGL173C RPP1BP10622 106 aaKnown RBP4.02□□□□□ -1.77
XRN1YGL173C TPD3P31383 635 aa4.02□□□□□ -1.77
XRN1YGL173C ARO1P08566 1588 aaKnown RBP4.02□□□□□ -1.77
XRN1YGL173C PKC1P24583 1151 aa4.01□□□□□ -1.77
XRN1YGL173C BIO2P32451 375 aa4.01□□□□□ -1.77
XRN1YGL173C GIN4Q12263 1142 aa4.01□□□□□ -1.77
XRN1YGL173C TAF13P11747 167 aa4.01□□□□□ -1.77
XRN1YGL173C RGR1P19263 1082 aa4.01□□□□□ -1.77
XRN1YGL173C LSO1Q3E827 93 aa4.01□□□□□ -1.77
XRN1YGL173C PDR15Q04182 1529 aaKnown RBP4.01□□□□□ -1.77
XRN1YGL173C VPS15P22219 1454 aa4.01□□□□□ -1.77
XRN1YGL173C APC11Q12157 165 aa4.01□□□□□ -1.77
XRN1YGL173C HOP09932 586 aa4□□□□□ -1.77
XRN1YGL173C SPR3P41901 512 aa4□□□□□ -1.77
XRN1YGL173C RPL34BP40525 121 aaKnown RBP4□□□□□ -1.77
XRN1YGL173C IQG1Q12280 1495 aa4□□□□□ -1.77
XRN1YGL173C TGL4P36165 910 aa4□□□□□ -1.77
XRN1YGL173C YBL036CP38197 257 aa4□□□□□ -1.77
XRN1YGL173C STS1P38637 319 aa4□□□□□ -1.77
XRN1YGL173C PHO87P25360 923 aa3.99□□□□□ -1.77
XRN1YGL173C PWP2P25635 923 aaKnown RBP3.99□□□□□ -1.77
XRN1YGL173C HAP4P14064 554 aa3.99□□□□□ -1.77
XRN1YGL173C HSC82P15108 705 aaKnown RBP3.99□□□□□ -1.77
XRN1YGL173C MVP1P40959 511 aaKnown RBP3.99□□□□□ -1.77
XRN1YGL173C SRS2P12954 1174 aa3.99□□□□□ -1.77
XRN1YGL173C STI1P15705 589 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
XRN1YGL173C KIC1P38692 1080 aa3.99□□□□□ -1.77
XRN1YGL173C VMA4P22203 233 aaKnown RBP3.98□□□□□ -1.77
XRN1YGL173C TRZ1P36159 838 aaPredicted RBP3.98□□□□□ -1.77
XRN1YGL173C PCS60P38137 543 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
XRN1YGL173C RAD59Q12223 238 aa3.98□□□□□ -1.77
XRN1YGL173C RAD54P32863 898 aa3.98□□□□□ -1.77
XRN1YGL173C UBX5Q06682 500 aa3.98□□□□□ -1.77
XRN1YGL173C TAT2P38967 592 aa3.98□□□□□ -1.77
XRN1YGL173C BOI2P39969 1040 aa3.98□□□□□ -1.77
XRN1YGL173C MDJ2P42834 146 aa3.98□□□□□ -1.77
XRN1YGL173C CLN2P20438 545 aa3.97□□□□□ -1.77
XRN1YGL173C VPS35P34110 944 aa3.97□□□□□ -1.77
XRN1YGL173C GAL2P13181 574 aa3.97□□□□□ -1.77
XRN1YGL173C RTG2P32608 588 aaKnown RBP3.97□□□□□ -1.77
XRN1YGL173C GAS4Q08271 471 aa3.97□□□□□ -1.77
XRN1YGL173C RDS2P19541 446 aaKnown RBP3.97□□□□□ -1.77
XRN1YGL173C YOR093CQ12275 1648 aa3.97□□□□□ -1.77
XRN1YGL173C TGL3P40308 642 aa3.97□□□□□ -1.77
XRN1YGL173C ESF2P53743 316 aaKnown RBP3.97□□□□□ -1.77
XRN1YGL173C TOM20P35180 183 aa3.96□□□□□ -1.78
XRN1YGL173C ESF1Q06344 628 aaKnown RBP3.96□□□□□ -1.78
XRN1YGL173C FRA1Q07825 749 aa3.96□□□□□ -1.78
XRN1YGL173C NKP1Q12493 238 aa3.96□□□□□ -1.78
XRN1YGL173C SOL3P38858 249 aa3.96□□□□□ -1.78
XRN1YGL173C TFG1P41895 735 aaPredicted RBP3.96□□□□□ -1.78
XRN1YGL173C KRI1P42846 591 aaKnown RBP3.96□□□□□ -1.78
XRN1YGL173C PPM2Q08282 695 aa3.96□□□□□ -1.78
XRN1YGL173C GRE2Q12068 342 aaKnown RBP3.96□□□□□ -1.78
XRN1YGL173C SPP41P38904 1435 aa3.96□□□□□ -1.78
XRN1YGL173C ATP4P05626 244 aa3.96□□□□□ -1.78
XRN1YGL173C FPK1P53739 893 aa3.96□□□□□ -1.78
XRN1YGL173C NSE3Q05541 303 aa3.96□□□□□ -1.78
XRN1YGL173C MMP1Q12372 583 aa3.96□□□□□ -1.78
XRN1YGL173C DPS1P04802 557 aaKnown RBP3.95□□□□□ -1.78
XRN1YGL173C SSB1P11484 613 aaKnown RBP3.95□□□□□ -1.78
XRN1YGL173C MGE1P38523 228 aa3.95□□□□□ -1.78
XRN1YGL173C CHZ1P40019 153 aaPredicted RBP3.95□□□□□ -1.78
XRN1YGL173C SSB2P40150 613 aaKnown RBP3.95□□□□□ -1.78
XRN1YGL173C EMP47P43555 445 aa3.95□□□□□ -1.78
XRN1YGL173C YFL034WP43564 1073 aa3.95□□□□□ -1.78
XRN1YGL173C YJL007CP47080 104 aa3.95□□□□□ -1.78
XRN1YGL173C ITC1P53125 1264 aa3.95□□□□□ -1.78
XRN1YGL173C MAG2Q06436 670 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms