RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W SIN3P22579 1536 aa2□□□□□ -2.09
MSN5YDR335W TRM1P15565 570 aaKnown RBP2□□□□□ -2.09
MSN5YDR335W CLB5P30283 435 aa2□□□□□ -2.09
MSN5YDR335W YPR204WQ08995 1032 aa2□□□□□ -2.09
MSN5YDR335W CPS1P27614 576 aa1.99□□□□□ -2.09
MSN5YDR335W IXR1P33417 597 aa1.99□□□□□ -2.09
MSN5YDR335W SNU71P53207 620 aaKnown RBP1.99□□□□□ -2.09
MSN5YDR335W YNR021WP53723 404 aaKnown RBP1.99□□□□□ -2.09
MSN5YDR335W ATG2P53855 1592 aa1.99□□□□□ -2.09
MSN5YDR335W BRN1P38170 754 aa1.99□□□□□ -2.09
MSN5YDR335W RSC30P38781 883 aa1.99□□□□□ -2.09
MSN5YDR335W GCR2Q01722 534 aa1.99□□□□□ -2.09
MSN5YDR335W YBL036CP38197 257 aa1.99□□□□□ -2.09
MSN5YDR335W SUB2Q07478 446 aaKnown RBP1.99□□□□□ -2.09
MSN5YDR335W RAD59Q12223 238 aa1.99□□□□□ -2.09
MSN5YDR335W SIT4P20604 311 aa1.98□□□□□ -2.09
MSN5YDR335W PSE1P32337 1089 aaKnown RBP1.98□□□□□ -2.09
MSN5YDR335W YJR008WP47085 338 aa1.98□□□□□ -2.09
MSN5YDR335W YNL115CP53925 644 aa1.98□□□□□ -2.09
MSN5YDR335W YML082WQ04533 649 aaKnown RBP1.98□□□□□ -2.09
MSN5YDR335W TRK1P12685 1235 aa1.98□□□□□ -2.09
MSN5YDR335W BIM1P40013 344 aa1.98□□□□□ -2.09
MSN5YDR335W THI12P42883 340 aa1.98□□□□□ -2.09
MSN5YDR335W THI5P43534 340 aa1.98□□□□□ -2.09
MSN5YDR335W THI11P47183 340 aa1.98□□□□□ -2.09
MSN5YDR335W SAS4Q04003 481 aa1.98□□□□□ -2.09
MSN5YDR335W YML083CQ04526 418 aa1.98□□□□□ -2.09
MSN5YDR335W THI13Q07748 340 aa1.98□□□□□ -2.09
MSN5YDR335W HAT1Q12341 374 aa1.98□□□□□ -2.09
MSN5YDR335W HSL1P34244 1518 aa1.98□□□□□ -2.09
MSN5YDR335W SSA4P22202 642 aaKnown RBP1.98□□□□□ -2.09
MSN5YDR335W AMS1P22855 1083 aa1.98□□□□□ -2.09
MSN5YDR335W UGA3P26370 528 aa1.98□□□□□ -2.09
MSN5YDR335W RRN6P32786 894 aa1.98□□□□□ -2.09
MSN5YDR335W KTR7P40504 517 aa1.98□□□□□ -2.09
MSN5YDR335W BDP1P46678 594 aa1.98□□□□□ -2.09
MSN5YDR335W RTS3P53289 263 aa1.98□□□□□ -2.09
MSN5YDR335W APP1P53933 587 aa1.98□□□□□ -2.09
MSN5YDR335W ALR1Q08269 859 aa1.98□□□□□ -2.09
MSN5YDR335W MET5P47169 1442 aa1.98□□□□□ -2.09
MSN5YDR335W HIR3P47171 1648 aa1.97□□□□□ -2.09
MSN5YDR335W YOR093CQ12275 1648 aa1.97□□□□□ -2.09
MSN5YDR335W JIP5Q06214 492 aaPredicted RBP1.97□□□□□ -2.09
MSN5YDR335W RGA1P39083 1007 aa1.97□□□□□ -2.09
MSN5YDR335W HAP1P0CE41 1502 aa1.96□□□□□ -2.1
MSN5YDR335W PUS6P53294 404 aa1.96□□□□□ -2.1
MSN5YDR335W ORC1P54784 914 aaPredicted RBP1.96□□□□□ -2.1
MSN5YDR335W SRC1Q03707 834 aa1.96□□□□□ -2.1
MSN5YDR335W PPG1P32838 368 aa1.96□□□□□ -2.1
MSN5YDR335W ASH1P34233 588 aa1.96□□□□□ -2.1
MSN5YDR335W RPA190P10964 1664 aaKnown RBP1.96□□□□□ -2.1
MSN5YDR335W RDS2P19541 446 aaKnown RBP1.96□□□□□ -2.1
MSN5YDR335W ENO2P00925 437 aaKnown RBP1.95□□□□□ -2.1
MSN5YDR335W DAT1P13483 248 aaKnown RBP1.95□□□□□ -2.1
MSN5YDR335W HST2P53686 357 aa1.95□□□□□ -2.1
MSN5YDR335W CDC25P04821 1589 aa1.95□□□□□ -2.1
MSN5YDR335W TIF1P10081 395 aaKnown RBP1.95□□□□□ -2.1
MSN5YDR335W CDC3P32457 520 aaKnown RBP1.95□□□□□ -2.1
MSN5YDR335W ENV9Q08651 330 aa1.95□□□□□ -2.1
MSN5YDR335W LTE1P07866 1435 aa1.95□□□□□ -2.1
MSN5YDR335W PDC1P06169 563 aaKnown RBP1.95□□□□□ -2.1
MSN5YDR335W MOD5P07884 428 aa1.95□□□□□ -2.1
MSN5YDR335W MRX12P47084 519 aa1.95□□□□□ -2.1
MSN5YDR335W AIM7Q12156 149 aa1.95□□□□□ -2.1
MSN5YDR335W RTG2P32608 588 aaKnown RBP1.94□□□□□ -2.1
MSN5YDR335W HAL5P38970 855 aaKnown RBP1.94□□□□□ -2.1
MSN5YDR335W ALD4P46367 519 aaKnown RBP1.94□□□□□ -2.1
MSN5YDR335W NOP8Q08287 484 aaPredicted RBP1.94□□□□□ -2.1
MSN5YDR335W ENO1P00924 437 aaKnown RBP1.94□□□□□ -2.1
MSN5YDR335W DNF2Q12675 1612 aa1.94□□□□□ -2.1
MSN5YDR335W SSA2P10592 639 aaKnown RBP1.93□□□□□ -2.1
MSN5YDR335W SYH1Q02875 849 aaKnown RBP1.93□□□□□ -2.1
MSN5YDR335W YPR084WQ06821 456 aa1.93□□□□□ -2.1
MSN5YDR335W FIG4P42837 879 aa1.93□□□□□ -2.1
MSN5YDR335W TY1B-BRQ12193 1756 aa1.93□□□□□ -2.1
MSN5YDR335W TY1B-GR3Q12316 1755 aa1.93□□□□□ -2.1
MSN5YDR335W TY1B-ORQ92393 1755 aa1.93□□□□□ -2.1
MSN5YDR335W YCF1P39109 1515 aaKnown RBP1.93□□□□□ -2.1
MSN5YDR335W BRE2P43132 505 aa1.93□□□□□ -2.1
MSN5YDR335W TSR4P25040 408 aa1.92□□□□□ -2.1
MSN5YDR335W DLD1P32891 587 aa1.92□□□□□ -2.1
MSN5YDR335W NUG1P40010 520 aaKnown RBP1.92□□□□□ -2.1
MSN5YDR335W LAM6Q08001 693 aa1.92□□□□□ -2.1
MSN5YDR335W MKS1P34072 584 aa1.92□□□□□ -2.1
MSN5YDR335W ALA1P40825 983 aaKnown RBP1.92□□□□□ -2.1
MSN5YDR335W BUD4P47136 1447 aa1.92□□□□□ -2.1
MSN5YDR335W HXT10P43581 546 aa1.92□□□□□ -2.1
MSN5YDR335W YRB30P53107 440 aaPredicted RBP1.92□□□□□ -2.1
MSN5YDR335W SUB1P54000 292 aaKnown RBP1.92□□□□□ -2.1
MSN5YDR335W DFG5Q05031 458 aa1.92□□□□□ -2.1
MSN5YDR335W NOB1Q08444 459 aaKnown RBP1.92□□□□□ -2.1
MSN5YDR335W MET32Q12041 191 aa1.92□□□□□ -2.1
MSN5YDR335W RKR1Q04781 1562 aa1.91□□□□□ -2.1
MSN5YDR335W EMP47P43555 445 aa1.91□□□□□ -2.1
MSN5YDR335W RPO31P04051 1460 aa1.91□□□□□ -2.1
MSN5YDR335W SPT6P23615 1451 aaKnown RBP1.91□□□□□ -2.1
MSN5YDR335W HEM3P28789 327 aa1.91□□□□□ -2.1
MSN5YDR335W TPS3P38426 1054 aaKnown RBP1.91□□□□□ -2.1
MSN5YDR335W IPL1P38991 367 aa1.91□□□□□ -2.1
MSN5YDR335W BPT1P14772 1559 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms