RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W GTT3P39996 337 aa3.29□□□□□ -1.88
SWR1YDR334W NAF1P53919 492 aaKnown RBP3.29□□□□□ -1.88
SWR1YDR334W SEC61P32915 480 aa3.29□□□□□ -1.88
SWR1YDR334W YIL177CP40434 1758 aa3.28□□□□□ -1.88
SWR1YDR334W YJL225CP40889 1758 aa3.28□□□□□ -1.88
SWR1YDR334W MNN4P36044 1178 aa3.28□□□□□ -1.88
SWR1YDR334W STH1P32597 1359 aa3.28□□□□□ -1.88
SWR1YDR334W SLI15P38283 698 aa3.28□□□□□ -1.88
SWR1YDR334W IOC2Q12072 812 aa3.28□□□□□ -1.88
SWR1YDR334W CSN12P47130 423 aa3.28□□□□□ -1.88
SWR1YDR334W YEL023CP39992 682 aa3.27□□□□□ -1.89
SWR1YDR334W RSC30P38781 883 aa3.27□□□□□ -1.89
SWR1YDR334W TIF11P38912 153 aaKnown RBP3.27□□□□□ -1.89
SWR1YDR334W TPD3P31383 635 aa3.26□□□□□ -1.89
SWR1YDR334W ITT1Q04638 464 aa3.26□□□□□ -1.89
SWR1YDR334W NOP8Q08287 484 aaPredicted RBP3.26□□□□□ -1.89
SWR1YDR334W VNX1P42839 908 aa3.26□□□□□ -1.89
SWR1YDR334W YNL035CP53962 389 aaKnown RBP3.26□□□□□ -1.89
SWR1YDR334W TFB3Q03290 321 aa3.26□□□□□ -1.89
SWR1YDR334W LAM6Q08001 693 aa3.26□□□□□ -1.89
SWR1YDR334W GLN1P32288 370 aaKnown RBP3.26□□□□□ -1.89
SWR1YDR334W ILV3P39522 585 aaKnown RBP3.26□□□□□ -1.89
SWR1YDR334W URB1P34241 1764 aaKnown RBP3.25□□□□□ -1.89
SWR1YDR334W DPL1Q05567 589 aa3.25□□□□□ -1.89
SWR1YDR334W NAP1P25293 417 aaKnown RBP3.25□□□□□ -1.89
SWR1YDR334W YPP1P46951 817 aa3.25□□□□□ -1.89
SWR1YDR334W MRX12P47084 519 aa3.25□□□□□ -1.89
SWR1YDR334W ISU2Q12056 156 aa3.25□□□□□ -1.89
SWR1YDR334W TRP5P00931 707 aaKnown RBP3.24□□□□□ -1.89
SWR1YDR334W TY4B-HP0C2J7 1802 aa3.24□□□□□ -1.89
SWR1YDR334W TY4B-JP47024 1803 aa3.24□□□□□ -1.89
SWR1YDR334W MAK16P10962 306 aaPredicted RBP3.24□□□□□ -1.89
SWR1YDR334W SUP45P12385 437 aaKnown RBP3.24□□□□□ -1.89
SWR1YDR334W UBP9P39967 754 aa3.24□□□□□ -1.89
SWR1YDR334W UTP13Q05946 817 aaKnown RBP3.24□□□□□ -1.89
SWR1YDR334W YSP2Q06681 1438 aa3.24□□□□□ -1.89
SWR1YDR334W DCW1P36091 449 aa3.23□□□□□ -1.89
SWR1YDR334W YNL115CP53925 644 aa3.23□□□□□ -1.89
SWR1YDR334W YRB30P53107 440 aaPredicted RBP3.23□□□□□ -1.89
SWR1YDR334W FPK1P53739 893 aa3.23□□□□□ -1.89
SWR1YDR334W NIS1P53939 407 aa3.23□□□□□ -1.89
SWR1YDR334W KTR1P27810 393 aaKnown RBP3.23□□□□□ -1.89
SWR1YDR334W YRF1-3P0CX14 1859 aa3.23□□□□□ -1.89
SWR1YDR334W YRF1-7P0CX15 1859 aa3.23□□□□□ -1.89
SWR1YDR334W YRF1-6P53819 1859 aa3.23□□□□□ -1.89
SWR1YDR334W SSA1P10591 642 aaKnown RBP3.22□□□□□ -1.89
SWR1YDR334W GEF1P37020 779 aa3.22□□□□□ -1.89
SWR1YDR334W MMP1Q12372 583 aa3.22□□□□□ -1.89
SWR1YDR334W SSA4P22202 642 aaKnown RBP3.21□□□□□ -1.9
SWR1YDR334W ARH1P48360 493 aa3.21□□□□□ -1.9
SWR1YDR334W SUB2Q07478 446 aaKnown RBP3.21□□□□□ -1.9
SWR1YDR334W RIM15P43565 1770 aa3.21□□□□□ -1.9
SWR1YDR334W BNI4P53858 892 aa3.21□□□□□ -1.9
SWR1YDR334W MRX10Q05648 414 aa3.21□□□□□ -1.9
SWR1YDR334W YPR109WQ06104 294 aa3.21□□□□□ -1.9
SWR1YDR334W UTP10P42945 1769 aaKnown RBP3.21□□□□□ -1.9
SWR1YDR334W CFT1Q06632 1357 aaKnown RBP3.21□□□□□ -1.9
SWR1YDR334W SET4P42948 560 aa3.2□□□□□ -1.9
SWR1YDR334W YML082WQ04533 649 aaKnown RBP3.2□□□□□ -1.9
SWR1YDR334W YLL066CQ99208 1374 aa3.2□□□□□ -1.9
SWR1YDR334W EAF7P53911 425 aaKnown RBP3.2□□□□□ -1.9
SWR1YDR334W RAD59Q12223 238 aa3.2□□□□□ -1.9
SWR1YDR334W ULI1P43604 169 aa3.2□□□□□ -1.9
SWR1YDR334W PIB1Q06651 286 aa3.2□□□□□ -1.9
SWR1YDR334W FUN12P39730 1002 aaKnown RBP3.2□□□□□ -1.9
SWR1YDR334W BIM1P40013 344 aa3.2□□□□□ -1.9
SWR1YDR334W APL6P46682 809 aa3.2□□□□□ -1.9
SWR1YDR334W RIM21P48565 533 aa3.2□□□□□ -1.9
SWR1YDR334W PUS6P53294 404 aa3.2□□□□□ -1.9
SWR1YDR334W PEX21P50091 288 aa3.19□□□□□ -1.9
SWR1YDR334W MPC54Q08550 464 aa3.19□□□□□ -1.9
SWR1YDR334W GEA1P47102 1408 aaPredicted RBP3.19□□□□□ -1.9
SWR1YDR334W PEP12P32854 288 aa3.19□□□□□ -1.9
SWR1YDR334W NOP7P53261 605 aaKnown RBP3.19□□□□□ -1.9
SWR1YDR334W TIF1P10081 395 aaKnown RBP3.18□□□□□ -1.9
SWR1YDR334W RAM1P22007 431 aa3.18□□□□□ -1.9
SWR1YDR334W ATG3P40344 310 aa3.18□□□□□ -1.9
SWR1YDR334W RPA14P50106 137 aa3.18□□□□□ -1.9
SWR1YDR334W TTI1P36097 1038 aa3.18□□□□□ -1.9
SWR1YDR334W YDL129WQ07555 291 aa3.18□□□□□ -1.9
SWR1YDR334W NOP2P40991 618 aaKnown RBP3.18□□□□□ -1.9
SWR1YDR334W CDC73Q06697 393 aa3.18□□□□□ -1.9
SWR1YDR334W PKC1P24583 1151 aa3.17□□□□□ -1.9
SWR1YDR334W YBL036CP38197 257 aa3.17□□□□□ -1.9
SWR1YDR334W FKH1P40466 484 aa3.17□□□□□ -1.9
SWR1YDR334W RTG1P32607 177 aa3.17□□□□□ -1.9
SWR1YDR334W HAP5Q02516 242 aa3.17□□□□□ -1.9
SWR1YDR334W BIO2P32451 375 aa3.17□□□□□ -1.9
SWR1YDR334W SPP1Q03012 353 aa3.17□□□□□ -1.9
SWR1YDR334W SAS4Q04003 481 aa3.17□□□□□ -1.9
SWR1YDR334W YMR196WQ04336 1088 aa3.17□□□□□ -1.9
SWR1YDR334W POL5P39985 1022 aaKnown RBP3.16□□□□□ -1.9
SWR1YDR334W ATG32P40458 529 aa3.16□□□□□ -1.9
SWR1YDR334W AGE1Q04412 482 aa3.16□□□□□ -1.9
SWR1YDR334W YPR097WQ06839 1073 aa3.16□□□□□ -1.9
SWR1YDR334W SPT23P35210 1082 aa3.16□□□□□ -1.9
SWR1YDR334W FRA1Q07825 749 aa3.16□□□□□ -1.9
SWR1YDR334W NMA111P53920 997 aa3.16□□□□□ -1.9
SWR1YDR334W PUF6Q04373 656 aaKnown RBP3.16□□□□□ -1.9
SWR1YDR334W APC1P53886 1748 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms