RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	ENO2	P00925	437 aa	Known RBP	4.25	□□□□□ -1.73
TFB1	YDR311W	TRK1	P12685	1235 aa		4.25	□□□□□ -1.73
TFB1	YDR311W	SLY41	P22215	453 aa		4.25	□□□□□ -1.73
TFB1	YDR311W	SEN54	Q02825	467 aa	Predicted RBP	4.25	□□□□□ -1.73
TFB1	YDR311W	FRK1	Q03002	865 aa	Predicted RBP	4.25	□□□□□ -1.73
TFB1	YDR311W	SSF1	P38789	453 aa	Predicted RBP	4.24	□□□□□ -1.73
TFB1	YDR311W	ARG8	P18544	423 aa		4.23	□□□□□ -1.73
TFB1	YDR311W	AIR1	P40507	360 aa	Known RBP	4.23	□□□□□ -1.73
TFB1	YDR311W	NOP7	P53261	605 aa	Known RBP	4.23	□□□□□ -1.73
TFB1	YDR311W	HAT1	Q12341	374 aa		4.23	□□□□□ -1.73
TFB1	YDR311W	MRX10	Q05648	414 aa		4.23	□□□□□ -1.73
TFB1	YDR311W	RRN6	P32786	894 aa		4.22	□□□□□ -1.73
TFB1	YDR311W	PUS6	P53294	404 aa		4.22	□□□□□ -1.73
TFB1	YDR311W	TPD3	P31383	635 aa		4.21	□□□□□ -1.74
TFB1	YDR311W	TGL4	P36165	910 aa		4.21	□□□□□ -1.74
TFB1	YDR311W	RSC30	P38781	883 aa		4.21	□□□□□ -1.74
TFB1	YDR311W	SNU71	P53207	620 aa	Known RBP	4.21	□□□□□ -1.74
TFB1	YDR311W	HED1	Q03937	162 aa		4.21	□□□□□ -1.74
TFB1	YDR311W	PAM1	P37304	830 aa	Known RBP	4.21	□□□□□ -1.74
TFB1	YDR311W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
TFB1	YDR311W	RIM21	P48565	533 aa		4.21	□□□□□ -1.74
TFB1	YDR311W	PDC1	P06169	563 aa	Known RBP	4.2	□□□□□ -1.74
TFB1	YDR311W	HEM3	P28789	327 aa		4.2	□□□□□ -1.74
TFB1	YDR311W	HXT10	P43581	546 aa		4.2	□□□□□ -1.74
TFB1	YDR311W	KXD1	P53158	218 aa		4.2	□□□□□ -1.74
TFB1	YDR311W	CDC4	P07834	779 aa		4.19	□□□□□ -1.74
TFB1	YDR311W	TRM1	P15565	570 aa	Known RBP	4.19	□□□□□ -1.74
TFB1	YDR311W	IOC4	Q04213	475 aa		4.19	□□□□□ -1.74
TFB1	YDR311W	PUS5	Q06244	254 aa		4.19	□□□□□ -1.74
TFB1	YDR311W	MAK16	P10962	306 aa	Predicted RBP	4.19	□□□□□ -1.74
TFB1	YDR311W	NAP1	P25293	417 aa	Known RBP	4.19	□□□□□ -1.74
TFB1	YDR311W	RPA14	P50106	137 aa		4.19	□□□□□ -1.74
TFB1	YDR311W	YPR097W	Q06839	1073 aa		4.19	□□□□□ -1.74
TFB1	YDR311W	IPL1	P38991	367 aa		4.18	□□□□□ -1.74
TFB1	YDR311W	MET10	P39692	1035 aa		4.18	□□□□□ -1.74
TFB1	YDR311W	RRD1	P40454	393 aa	Known RBP	4.17	□□□□□ -1.74
TFB1	YDR311W	ECM23	Q02710	187 aa		4.17	□□□□□ -1.74
TFB1	YDR311W	YDL206W	Q12424	762 aa		4.17	□□□□□ -1.74
TFB1	YDR311W	RDS2	P19541	446 aa	Known RBP	4.17	□□□□□ -1.74
TFB1	YDR311W	SPT5	P27692	1063 aa	Known RBP	4.17	□□□□□ -1.74
TFB1	YDR311W	PEP12	P32854	288 aa		4.17	□□□□□ -1.74
TFB1	YDR311W	SIS2	P36024	562 aa		4.17	□□□□□ -1.74
TFB1	YDR311W	MET32	Q12041	191 aa		4.17	□□□□□ -1.74
TFB1	YDR311W	KTR7	P40504	517 aa		4.16	□□□□□ -1.74
TFB1	YDR311W	ALR1	Q08269	859 aa		4.16	□□□□□ -1.74
TFB1	YDR311W	TBF1	Q02457	562 aa		4.15	□□□□□ -1.74
TFB1	YDR311W	YBL113C	Q7M4S9	792 aa		4.15	□□□□□ -1.75
TFB1	YDR311W	TPS3	P38426	1054 aa	Known RBP	4.14	□□□□□ -1.75
TFB1	YDR311W	BRE2	P43132	505 aa		4.14	□□□□□ -1.75
TFB1	YDR311W	ALD2	P47771	506 aa		4.14	□□□□□ -1.75
TFB1	YDR311W	ISF1	P32488	338 aa		4.13	□□□□□ -1.75
TFB1	YDR311W	ASH1	P34233	588 aa		4.13	□□□□□ -1.75
TFB1	YDR311W	ERP5	P38819	212 aa		4.13	□□□□□ -1.75
TFB1	YDR311W	AFT1	P22149	690 aa		4.13	□□□□□ -1.75
TFB1	YDR311W	UBX7	P38349	436 aa		4.13	□□□□□ -1.75
TFB1	YDR311W	SYH1	Q02875	849 aa	Known RBP	4.13	□□□□□ -1.75
TFB1	YDR311W	MCM16	Q12262	181 aa		4.13	□□□□□ -1.75
TFB1	YDR311W	STM1	P39015	273 aa	Known RBP	4.12	□□□□□ -1.75
TFB1	YDR311W	GCR2	Q01722	534 aa		4.12	□□□□□ -1.75
TFB1	YDR311W	ITT1	Q04638	464 aa		4.12	□□□□□ -1.75
TFB1	YDR311W	TRL1	P09880	827 aa	Known RBP	4.11	□□□□□ -1.75
TFB1	YDR311W	GAL2	P13181	574 aa		4.11	□□□□□ -1.75
TFB1	YDR311W	ATE1	P16639	503 aa		4.11	□□□□□ -1.75
TFB1	YDR311W	VAC17	P25591	423 aa		4.11	□□□□□ -1.75
TFB1	YDR311W	YPP1	P46951	817 aa		4.11	□□□□□ -1.75
TFB1	YDR311W	NAF1	P53919	492 aa	Known RBP	4.11	□□□□□ -1.75
TFB1	YDR311W	YHL050C	P38721	697 aa		4.1	□□□□□ -1.75
TFB1	YDR311W	YHR219W	P38900	624 aa		4.1	□□□□□ -1.75
TFB1	YDR311W	EMP47	P43555	445 aa		4.1	□□□□□ -1.75
TFB1	YDR311W	RRP15	Q06511	250 aa	Predicted RBP	4.1	□□□□□ -1.75
TFB1	YDR311W	MSC6	Q08818	692 aa	Known RBP	4.1	□□□□□ -1.75
TFB1	YDR311W	KIP2	P28743	706 aa		4.09	□□□□□ -1.75
TFB1	YDR311W	MRT4	P33201	236 aa	Known RBP	4.09	□□□□□ -1.75
TFB1	YDR311W	MDJ2	P42834	146 aa		4.09	□□□□□ -1.75
TFB1	YDR311W	HST3	P53687	447 aa		4.09	□□□□□ -1.75
TFB1	YDR311W	CWC15	Q03772	175 aa	Known RBP	4.09	□□□□□ -1.75
TFB1	YDR311W	KAR5	Q04746	504 aa		4.09	□□□□□ -1.75
TFB1	YDR311W	ENV9	Q08651	330 aa		4.09	□□□□□ -1.75
TFB1	YDR311W	WHI5	Q12416	295 aa		4.09	□□□□□ -1.75
TFB1	YDR311W	SEC20	P28791	383 aa		4.09	□□□□□ -1.76
TFB1	YDR311W	IXR1	P33417	597 aa		4.09	□□□□□ -1.76
TFB1	YDR311W	MET22	P32179	357 aa		4.07	□□□□□ -1.76
TFB1	YDR311W	ASF1	P32447	279 aa		4.07	□□□□□ -1.76
TFB1	YDR311W	GRS1	P38088	690 aa	Known RBP	4.07	□□□□□ -1.76
TFB1	YDR311W	FIG4	P42837	879 aa		4.07	□□□□□ -1.76
TFB1	YDR311W	POL32	P47110	350 aa		4.07	□□□□□ -1.76
TFB1	YDR311W	YJR115W	P47152	169 aa		4.07	□□□□□ -1.76
TFB1	YDR311W	MSB3	P48566	633 aa	Predicted RBP	4.07	□□□□□ -1.76
TFB1	YDR311W	OCA5	P38738	679 aa		4.06	□□□□□ -1.76
TFB1	YDR311W	ACS2	P52910	683 aa	Known RBP	4.06	□□□□□ -1.76
TFB1	YDR311W	YTA7	P40340	1379 aa		4.06	□□□□□ -1.76
TFB1	YDR311W	BOL3	P39724	118 aa		4.05	□□□□□ -1.76
TFB1	YDR311W	ROM1	P53046	1155 aa		4.05	□□□□□ -1.76
TFB1	YDR311W	PNP1	Q05788	311 aa		4.05	□□□□□ -1.76
TFB1	YDR311W	YPR084W	Q06821	456 aa		4.05	□□□□□ -1.76
TFB1	YDR311W	PHO87	P25360	923 aa		4.04	□□□□□ -1.76
TFB1	YDR311W	SEC8	P32855	1065 aa		4.04	□□□□□ -1.76
TFB1	YDR311W	EMW1	P42842	904 aa	Known RBP	4.04	□□□□□ -1.76
TFB1	YDR311W	THI12	P42883	340 aa		4.04	□□□□□ -1.76
TFB1	YDR311W	THI5	P43534	340 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms