RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C YPP1P46951 817 aa8.74□□□□□ -1.01
RTN1YDR233C VRP1P37370 817 aa8.73□□□□□ -1.01
RTN1YDR233C EMP47P43555 445 aa8.72□□□□□ -1.01
RTN1YDR233C PEP12P32854 288 aa8.71□□□□□ -1.02
RTN1YDR233C FRA1Q07825 749 aa8.71□□□□□ -1.02
RTN1YDR233C SSA1P10591 642 aaKnown RBP8.7□□□□□ -1.02
RTN1YDR233C VAC17P25591 423 aa8.7□□□□□ -1.02
RTN1YDR233C NOB1Q08444 459 aaKnown RBP8.7□□□□□ -1.02
RTN1YDR233C GUT2P32191 649 aa8.69□□□□□ -1.02
RTN1YDR233C SIS2P36024 562 aa8.69□□□□□ -1.02
RTN1YDR233C PUP1P25043 261 aa8.68□□□□□ -1.02
RTN1YDR233C APL6P46682 809 aa8.67□□□□□ -1.02
RTN1YDR233C STE20Q03497 939 aaKnown RBP8.67□□□□□ -1.02
RTN1YDR233C MRF1P30775 413 aaPredicted RBP8.65□□□□□ -1.02
RTN1YDR233C BCK2P33306 851 aa8.65□□□□□ -1.02
RTN1YDR233C GEF1P37020 779 aa8.65□□□□□ -1.02
RTN1YDR233C YML083CQ04526 418 aa8.65□□□□□ -1.02
RTN1YDR233C TGL4P36165 910 aa8.64□□□□□ -1.03
RTN1YDR233C BDP1P46678 594 aa8.64□□□□□ -1.03
RTN1YDR233C MRX12P47084 519 aa8.64□□□□□ -1.03
RTN1YDR233C ITT1Q04638 464 aa8.64□□□□□ -1.03
RTN1YDR233C CST6P40535 587 aa8.63□□□□□ -1.03
RTN1YDR233C PUS5Q06244 254 aa8.62□□□□□ -1.03
RTN1YDR233C KTR7P40504 517 aa8.61□□□□□ -1.03
RTN1YDR233C FRK1Q03002 865 aaPredicted RBP8.6□□□□□ -1.03
RTN1YDR233C ENV9Q08651 330 aa8.6□□□□□ -1.03
RTN1YDR233C SOH1P38633 127 aa8.59□□□□□ -1.03
RTN1YDR233C IXR1P33417 597 aa8.58□□□□□ -1.04
RTN1YDR233C XDJ1P39102 459 aa8.57□□□□□ -1.04
RTN1YDR233C UTP13Q05946 817 aaKnown RBP8.57□□□□□ -1.04
RTN1YDR233C ATG3P40344 310 aa8.56□□□□□ -1.04
RTN1YDR233C GAL2P13181 574 aa8.55□□□□□ -1.04
RTN1YDR233C KIP2P28743 706 aa8.55□□□□□ -1.04
RTN1YDR233C HAL5P38970 855 aaKnown RBP8.55□□□□□ -1.04
RTN1YDR233C ECM23Q02710 187 aa8.55□□□□□ -1.04
RTN1YDR233C YEL077CQ3E7X8 1277 aa8.55□□□□□ -1.04
RTN1YDR233C SYH1Q02875 849 aaKnown RBP8.53□□□□□ -1.04
RTN1YDR233C ISR1Q06098 443 aaKnown RBP8.52□□□□□ -1.05
RTN1YDR233C EMW1P42842 904 aaKnown RBP8.51□□□□□ -1.05
RTN1YDR233C APP1P53933 587 aa8.51□□□□□ -1.05
RTN1YDR233C RPL34AP87262 121 aaPredicted RBP8.51□□□□□ -1.05
RTN1YDR233C AMS1P22855 1083 aa8.5□□□□□ -1.05
RTN1YDR233C PHO87P25360 923 aa8.5□□□□□ -1.05
RTN1YDR233C ACS2P52910 683 aaKnown RBP8.5□□□□□ -1.05
RTN1YDR233C ATG20Q07528 640 aa8.5□□□□□ -1.05
RTN1YDR233C UBX7P38349 436 aa8.48□□□□□ -1.05
RTN1YDR233C CLA4P48562 842 aa8.48□□□□□ -1.05
RTN1YDR233C SLX8P40072 274 aa8.47□□□□□ -1.05
RTN1YDR233C ROM1P53046 1155 aa8.47□□□□□ -1.05
RTN1YDR233C YML020WQ03722 664 aa8.47□□□□□ -1.05
RTN1YDR233C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
RTN1YDR233C MRT4P33201 236 aaKnown RBP8.46□□□□□ -1.06
RTN1YDR233C RAS1P01119 309 aa8.45□□□□□ -1.06
RTN1YDR233C HAP4P14064 554 aa8.45□□□□□ -1.06
RTN1YDR233C MIP1P15801 1254 aa8.45□□□□□ -1.06
RTN1YDR233C CDC3P32457 520 aaKnown RBP8.45□□□□□ -1.06
RTN1YDR233C HDA3Q06623 655 aa8.45□□□□□ -1.06
RTN1YDR233C TSC13Q99190 310 aa8.45□□□□□ -1.06
RTN1YDR233C PDI1P17967 522 aaKnown RBP8.44□□□□□ -1.06
RTN1YDR233C HED1Q03937 162 aa8.44□□□□□ -1.06
RTN1YDR233C NOP8Q08287 484 aaPredicted RBP8.44□□□□□ -1.06
RTN1YDR233C MKS1P34072 584 aa8.43□□□□□ -1.06
RTN1YDR233C FBP26P32604 452 aa8.42□□□□□ -1.06
RTN1YDR233C YBL086CP38177 466 aa8.42□□□□□ -1.06
RTN1YDR233C TPS3P38426 1054 aaKnown RBP8.42□□□□□ -1.06
RTN1YDR233C AIM9P40053 627 aaKnown RBP8.42□□□□□ -1.06
RTN1YDR233C GAS4Q08271 471 aa8.42□□□□□ -1.06
RTN1YDR233C ISU1Q03020 165 aa8.41□□□□□ -1.06
RTN1YDR233C SPT2P06843 333 aaPredicted RBP8.4□□□□□ -1.06
RTN1YDR233C CWC15Q03772 175 aaKnown RBP8.4□□□□□ -1.06
RTN1YDR233C MET32Q12041 191 aa8.4□□□□□ -1.06
RTN1YDR233C YFL034WP43564 1073 aa8.38□□□□□ -1.07
RTN1YDR233C DFG5Q05031 458 aa8.38□□□□□ -1.07
RTN1YDR233C STE6P12866 1290 aa8.37□□□□□ -1.07
RTN1YDR233C UTR2P32623 467 aa8.37□□□□□ -1.07
RTN1YDR233C AIR1P40507 360 aaKnown RBP8.37□□□□□ -1.07
RTN1YDR233C NTH2P35172 780 aa8.36□□□□□ -1.07
RTN1YDR233C SSF1P38789 453 aaPredicted RBP8.36□□□□□ -1.07
RTN1YDR233C PUF6Q04373 656 aaKnown RBP8.36□□□□□ -1.07
RTN1YDR233C SWI5P08153 709 aa8.35□□□□□ -1.07
RTN1YDR233C HAT1Q12341 374 aa8.35□□□□□ -1.07
RTN1YDR233C RPS6AP0CX37 236 aaKnown RBP8.34□□□□□ -1.07
RTN1YDR233C RPS6BP0CX38 236 aaPredicted RBP8.34□□□□□ -1.07
RTN1YDR233C UBP1P25037 809 aa8.34□□□□□ -1.07
RTN1YDR233C SUV3P32580 737 aa8.33□□□□□ -1.08
RTN1YDR233C CYT1P07143 309 aa8.32□□□□□ -1.08
RTN1YDR233C CDC4P07834 779 aa8.32□□□□□ -1.08
RTN1YDR233C VAN1P23642 535 aa8.32□□□□□ -1.08
RTN1YDR233C WTM2Q12206 467 aa8.32□□□□□ -1.08
RTN1YDR233C DPS1P04802 557 aaKnown RBP8.31□□□□□ -1.08
RTN1YDR233C DAT1P13483 248 aaKnown RBP8.31□□□□□ -1.08
RTN1YDR233C BDS1Q08347 646 aa8.31□□□□□ -1.08
RTN1YDR233C PNP1Q05788 311 aa8.3□□□□□ -1.08
RTN1YDR233C PUN1Q06991 263 aa8.3□□□□□ -1.08
RTN1YDR233C TRS33Q99394 268 aa8.3□□□□□ -1.08
RTN1YDR233C SRS2P12954 1174 aa8.29□□□□□ -1.08
RTN1YDR233C BOL3P39724 118 aa8.29□□□□□ -1.08
RTN1YDR233C AFT1P22149 690 aa8.28□□□□□ -1.08
RTN1YDR233C TBS1P38114 1094 aa8.28□□□□□ -1.08
RTN1YDR233C ALD4P46367 519 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms